RNA–Protein interactions for RNA: ENST00000574224.1

ABCC1-205, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 1 (best)

Gene ABCC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-205ENST00000574224 NISCHQ9Y2I1 1504 aa28.24■■■□□ 2.11
ABCC1-205ENST00000574224 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
ABCC1-205ENST00000574224 ABCC9O60706 1549 aa24.58■■□□□ 1.53
ABCC1-205ENST00000574224 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
ABCC1-205ENST00000574224 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
ABCC1-205ENST00000574224 NACADO15069 1562 aa23.59■■□□□ 1.37
ABCC1-205ENST00000574224 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
ABCC1-205ENST00000574224 MYO15BQ96JP2 1530 aa23.44■■□□□ 1.34
ABCC1-205ENST00000574224 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
ABCC1-205ENST00000574224 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
ABCC1-205ENST00000574224 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
ABCC1-205ENST00000574224 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
ABCC1-205ENST00000574224 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
ABCC1-205ENST00000574224 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
ABCC1-205ENST00000574224 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
ABCC1-205ENST00000574224 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
ABCC1-205ENST00000574224 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
ABCC1-205ENST00000574224 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
ABCC1-205ENST00000574224 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
ABCC1-205ENST00000574224 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
ABCC1-205ENST00000574224 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
ABCC1-205ENST00000574224 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
ABCC1-205ENST00000574224 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
ABCC1-205ENST00000574224 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
ABCC1-205ENST00000574224 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
ABCC1-205ENST00000574224 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
ABCC1-205ENST00000574224 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.06
ABCC1-205ENST00000574224 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
ABCC1-205ENST00000574224 WIZO95785 1651 aa21.49■■□□□ 1.03
ABCC1-205ENST00000574224 TOP2AP11388 1531 aaKnown RBP21.33■■□□□ 1
ABCC1-205ENST00000574224 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
ABCC1-205ENST00000574224 ERCC6Q03468 1493 aa21.27■■□□□ 1
ABCC1-205ENST00000574224 NESP48681 1621 aa21.23■□□□□ 0.99
ABCC1-205ENST00000574224 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
ABCC1-205ENST00000574224 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
ABCC1-205ENST00000574224 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.97
ABCC1-205ENST00000574224 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
ABCC1-205ENST00000574224 CFTRP13569 1480 aa21.03■□□□□ 0.96
ABCC1-205ENST00000574224 CUX2O14529 1486 aa20.94■□□□□ 0.94
ABCC1-205ENST00000574224 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
ABCC1-205ENST00000574224 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
ABCC1-205ENST00000574224 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
ABCC1-205ENST00000574224 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
ABCC1-205ENST00000574224 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
ABCC1-205ENST00000574224 WDR62O43379 1518 aa20.75■□□□□ 0.91
ABCC1-205ENST00000574224 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
ABCC1-205ENST00000574224 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
ABCC1-205ENST00000574224 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
ABCC1-205ENST00000574224 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
ABCC1-205ENST00000574224 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
ABCC1-205ENST00000574224 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
ABCC1-205ENST00000574224 IFT140Q96RY7 1462 aa20.49■□□□□ 0.87
ABCC1-205ENST00000574224 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
ABCC1-205ENST00000574224 CUX1P39880 1505 aa20.41■□□□□ 0.86
ABCC1-205ENST00000574224 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
ABCC1-205ENST00000574224 SOGA1O94964 1423 aa20.38■□□□□ 0.85
ABCC1-205ENST00000574224 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
ABCC1-205ENST00000574224 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
ABCC1-205ENST00000574224 RAD54L2Q9Y4B4 1467 aa20.33■□□□□ 0.84
ABCC1-205ENST00000574224 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
ABCC1-205ENST00000574224 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.83
ABCC1-205ENST00000574224 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.834e-7■■■■□ 22
ABCC1-205ENST00000574224 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
ABCC1-205ENST00000574224 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
ABCC1-205ENST00000574224 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
ABCC1-205ENST00000574224 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
ABCC1-205ENST00000574224 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
ABCC1-205ENST00000574224 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
ABCC1-205ENST00000574224 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
ABCC1-205ENST00000574224 FBLN2P98095 1184 aa20.14■□□□□ 0.81
ABCC1-205ENST00000574224 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
ABCC1-205ENST00000574224 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
ABCC1-205ENST00000574224 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
ABCC1-205ENST00000574224 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
ABCC1-205ENST00000574224 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
ABCC1-205ENST00000574224 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
ABCC1-205ENST00000574224 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
ABCC1-205ENST00000574224 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
ABCC1-205ENST00000574224 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
ABCC1-205ENST00000574224 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
ABCC1-205ENST00000574224 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
ABCC1-205ENST00000574224 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
ABCC1-205ENST00000574224 CHD1O14646 1710 aa19.92■□□□□ 0.78
ABCC1-205ENST00000574224 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
ABCC1-205ENST00000574224 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
ABCC1-205ENST00000574224 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
ABCC1-205ENST00000574224 IGF1RP08069 1367 aa19.82■□□□□ 0.76
ABCC1-205ENST00000574224 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
ABCC1-205ENST00000574224 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
ABCC1-205ENST00000574224 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
ABCC1-205ENST00000574224 CUL7Q14999 1698 aa19.74■□□□□ 0.75
ABCC1-205ENST00000574224 NUP160Q12769 1436 aa19.73■□□□□ 0.75
ABCC1-205ENST00000574224 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
ABCC1-205ENST00000574224 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
ABCC1-205ENST00000574224 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
ABCC1-205ENST00000574224 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
ABCC1-205ENST00000574224 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
ABCC1-205ENST00000574224 LOC105371045A0A1W2PR82 267 aa19.69■□□□□ 0.74
ABCC1-205ENST00000574224 EEA1Q15075 1411 aa19.67■□□□□ 0.74
ABCC1-205ENST00000574224 CYB5RLQ6IPT4 315 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms