RNA–Protein interactions for RNA: ENST00000573588.5

RPH3AL-211, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-211ENST00000573588 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
RPH3AL-211ENST00000573588 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
RPH3AL-211ENST00000573588 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
RPH3AL-211ENST00000573588 CCDC180Q9P1Z9 1646 aa28.84■■■□□ 2.21
RPH3AL-211ENST00000573588 ABCC9O60706 1549 aa28.38■■■□□ 2.13
RPH3AL-211ENST00000573588 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
RPH3AL-211ENST00000573588 NACADO15069 1562 aa27.11■■□□□ 1.93
RPH3AL-211ENST00000573588 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.91
RPH3AL-211ENST00000573588 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
RPH3AL-211ENST00000573588 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
RPH3AL-211ENST00000573588 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
RPH3AL-211ENST00000573588 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
RPH3AL-211ENST00000573588 BICRAQ9NZM4 1560 aa26.52■■□□□ 1.84
RPH3AL-211ENST00000573588 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
RPH3AL-211ENST00000573588 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
RPH3AL-211ENST00000573588 SCRIBQ14160 1630 aa26.33■■□□□ 1.81
RPH3AL-211ENST00000573588 DNAJC5BQ9UF47 199 aa26.3■■□□□ 1.8
RPH3AL-211ENST00000573588 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
RPH3AL-211ENST00000573588 EIF4G1Q04637 1599 aaKnown RBP25.74■■□□□ 1.71
RPH3AL-211ENST00000573588 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.7
RPH3AL-211ENST00000573588 CECR2Q9BXF3 1484 aa25.49■■□□□ 1.67
RPH3AL-211ENST00000573588 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
RPH3AL-211ENST00000573588 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
RPH3AL-211ENST00000573588 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
RPH3AL-211ENST00000573588 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
RPH3AL-211ENST00000573588 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
RPH3AL-211ENST00000573588 MROH2BQ7Z745 1585 aa24.99■■□□□ 1.59
RPH3AL-211ENST00000573588 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
RPH3AL-211ENST00000573588 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
RPH3AL-211ENST00000573588 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
RPH3AL-211ENST00000573588 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
RPH3AL-211ENST00000573588 WIZO95785 1651 aa24.72■■□□□ 1.55
RPH3AL-211ENST00000573588 PLPPR3Q6T4P5 718 aa24.63■■□□□ 1.53
RPH3AL-211ENST00000573588 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
RPH3AL-211ENST00000573588 NESP48681 1621 aa24.57■■□□□ 1.52
RPH3AL-211ENST00000573588 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.5
RPH3AL-211ENST00000573588 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
RPH3AL-211ENST00000573588 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
RPH3AL-211ENST00000573588 KIF21AQ7Z4S6 1674 aa24.28■■□□□ 1.48
RPH3AL-211ENST00000573588 CADPSQ9ULU8 1353 aa24.28■■□□□ 1.48
RPH3AL-211ENST00000573588 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
RPH3AL-211ENST00000573588 CUX2O14529 1486 aa24.22■■□□□ 1.47
RPH3AL-211ENST00000573588 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
RPH3AL-211ENST00000573588 CFTRP13569 1480 aa24.13■■□□□ 1.45
RPH3AL-211ENST00000573588 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
RPH3AL-211ENST00000573588 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
RPH3AL-211ENST00000573588 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
RPH3AL-211ENST00000573588 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
RPH3AL-211ENST00000573588 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
RPH3AL-211ENST00000573588 WDR62O43379 1518 aa23.97■■□□□ 1.43
RPH3AL-211ENST00000573588 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
RPH3AL-211ENST00000573588 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
RPH3AL-211ENST00000573588 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
RPH3AL-211ENST00000573588 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
RPH3AL-211ENST00000573588 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
RPH3AL-211ENST00000573588 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
RPH3AL-211ENST00000573588 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
RPH3AL-211ENST00000573588 FOXD1Q16676 465 aa23.48■■□□□ 1.35
RPH3AL-211ENST00000573588 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
RPH3AL-211ENST00000573588 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
RPH3AL-211ENST00000573588 CUX1P39880 1505 aa23.45■■□□□ 1.34
RPH3AL-211ENST00000573588 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
RPH3AL-211ENST00000573588 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
RPH3AL-211ENST00000573588 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
RPH3AL-211ENST00000573588 FGD5Q6ZNL6 1462 aa23.35■■□□□ 1.33
RPH3AL-211ENST00000573588 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.32
RPH3AL-211ENST00000573588 SOGA1O94964 1423 aa23.27■■□□□ 1.32
RPH3AL-211ENST00000573588 WDR97A6NE52 1622 aa23.25■■□□□ 1.31
RPH3AL-211ENST00000573588 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
RPH3AL-211ENST00000573588 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
RPH3AL-211ENST00000573588 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
RPH3AL-211ENST00000573588 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
RPH3AL-211ENST00000573588 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
RPH3AL-211ENST00000573588 CHD1O14646 1710 aa23.13■■□□□ 1.29
RPH3AL-211ENST00000573588 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
RPH3AL-211ENST00000573588 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
RPH3AL-211ENST00000573588 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
RPH3AL-211ENST00000573588 ADRA2BP18089 450 aa23.08■■□□□ 1.29
RPH3AL-211ENST00000573588 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
RPH3AL-211ENST00000573588 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
RPH3AL-211ENST00000573588 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
RPH3AL-211ENST00000573588 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
RPH3AL-211ENST00000573588 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
RPH3AL-211ENST00000573588 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
RPH3AL-211ENST00000573588 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
RPH3AL-211ENST00000573588 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
RPH3AL-211ENST00000573588 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
RPH3AL-211ENST00000573588 FBLN2P98095 1184 aa22.91■■□□□ 1.26
RPH3AL-211ENST00000573588 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
RPH3AL-211ENST00000573588 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
RPH3AL-211ENST00000573588 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
RPH3AL-211ENST00000573588 ADAMTS12P58397 1594 aa22.86■■□□□ 1.25
RPH3AL-211ENST00000573588 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
RPH3AL-211ENST00000573588 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
RPH3AL-211ENST00000573588 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
RPH3AL-211ENST00000573588 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
RPH3AL-211ENST00000573588 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
RPH3AL-211ENST00000573588 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
RPH3AL-211ENST00000573588 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
RPH3AL-211ENST00000573588 NUP160Q12769 1436 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms