RNA–Protein interactions for RNA: ENST00000573004.5

CAMTA2-209, Transcript of calmodulin binding transcription activator 2, humanhuman

TSL 2

Gene CAMTA2, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA2-209ENST00000573004 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
CAMTA2-209ENST00000573004 ABCC9O60706 1549 aa21.2■□□□□ 0.98
CAMTA2-209ENST00000573004 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
CAMTA2-209ENST00000573004 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
CAMTA2-209ENST00000573004 NACADO15069 1562 aa19.98■□□□□ 0.79
CAMTA2-209ENST00000573004 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
CAMTA2-209ENST00000573004 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
CAMTA2-209ENST00000573004 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
CAMTA2-209ENST00000573004 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
CAMTA2-209ENST00000573004 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
CAMTA2-209ENST00000573004 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
CAMTA2-209ENST00000573004 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
CAMTA2-209ENST00000573004 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
CAMTA2-209ENST00000573004 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
CAMTA2-209ENST00000573004 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
CAMTA2-209ENST00000573004 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
CAMTA2-209ENST00000573004 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
CAMTA2-209ENST00000573004 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
CAMTA2-209ENST00000573004 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
CAMTA2-209ENST00000573004 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
CAMTA2-209ENST00000573004 CUX2O14529 1486 aa18.38■□□□□ 0.53
CAMTA2-209ENST00000573004 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
CAMTA2-209ENST00000573004 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
CAMTA2-209ENST00000573004 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
CAMTA2-209ENST00000573004 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
CAMTA2-209ENST00000573004 SMARCA2P51531 1590 aa18.32■□□□□ 0.52
CAMTA2-209ENST00000573004 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
CAMTA2-209ENST00000573004 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
CAMTA2-209ENST00000573004 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
CAMTA2-209ENST00000573004 NESP48681 1621 aa18.17■□□□□ 0.5
CAMTA2-209ENST00000573004 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
CAMTA2-209ENST00000573004 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
CAMTA2-209ENST00000573004 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
CAMTA2-209ENST00000573004 KIF21AQ7Z4S6 1674 aa17.98■□□□□ 0.47
CAMTA2-209ENST00000573004 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
CAMTA2-209ENST00000573004 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
CAMTA2-209ENST00000573004 WIZO95785 1651 aa17.82■□□□□ 0.44
CAMTA2-209ENST00000573004 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
CAMTA2-209ENST00000573004 WDR62O43379 1518 aa17.8■□□□□ 0.44
CAMTA2-209ENST00000573004 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
CAMTA2-209ENST00000573004 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
CAMTA2-209ENST00000573004 CFTRP13569 1480 aa17.63■□□□□ 0.41
CAMTA2-209ENST00000573004 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
CAMTA2-209ENST00000573004 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
CAMTA2-209ENST00000573004 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
CAMTA2-209ENST00000573004 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
CAMTA2-209ENST00000573004 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
CAMTA2-209ENST00000573004 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
CAMTA2-209ENST00000573004 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
CAMTA2-209ENST00000573004 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
CAMTA2-209ENST00000573004 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
CAMTA2-209ENST00000573004 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
CAMTA2-209ENST00000573004 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
CAMTA2-209ENST00000573004 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
CAMTA2-209ENST00000573004 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
CAMTA2-209ENST00000573004 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
CAMTA2-209ENST00000573004 DNMBPQ6XZF7 1577 aa17.27■□□□□ 0.35
CAMTA2-209ENST00000573004 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
CAMTA2-209ENST00000573004 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
CAMTA2-209ENST00000573004 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
CAMTA2-209ENST00000573004 CHD1O14646 1710 aa17.16■□□□□ 0.34
CAMTA2-209ENST00000573004 POLA1P09884 1462 aaPredicted RBP17.14■□□□□ 0.33
CAMTA2-209ENST00000573004 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■□□□ 11.9
CAMTA2-209ENST00000573004 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
CAMTA2-209ENST00000573004 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
CAMTA2-209ENST00000573004 RAD54L2Q9Y4B4 1467 aa17.04■□□□□ 0.32
CAMTA2-209ENST00000573004 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
CAMTA2-209ENST00000573004 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
CAMTA2-209ENST00000573004 SOGA1O94964 1423 aa17■□□□□ 0.31
CAMTA2-209ENST00000573004 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
CAMTA2-209ENST00000573004 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
CAMTA2-209ENST00000573004 FBLN2P98095 1184 aa16.98■□□□□ 0.31
CAMTA2-209ENST00000573004 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
CAMTA2-209ENST00000573004 CUX1P39880 1505 aa16.97■□□□□ 0.31
CAMTA2-209ENST00000573004 CLASP1Q7Z460 1538 aa16.97■□□□□ 0.31
CAMTA2-209ENST00000573004 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
CAMTA2-209ENST00000573004 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
CAMTA2-209ENST00000573004 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
CAMTA2-209ENST00000573004 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
CAMTA2-209ENST00000573004 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
CAMTA2-209ENST00000573004 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
CAMTA2-209ENST00000573004 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
CAMTA2-209ENST00000573004 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
CAMTA2-209ENST00000573004 GAPVD1Q14C86 1478 aa16.82■□□□□ 0.28
CAMTA2-209ENST00000573004 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
CAMTA2-209ENST00000573004 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
CAMTA2-209ENST00000573004 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
CAMTA2-209ENST00000573004 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
CAMTA2-209ENST00000573004 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
CAMTA2-209ENST00000573004 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
CAMTA2-209ENST00000573004 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
CAMTA2-209ENST00000573004 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
CAMTA2-209ENST00000573004 NUP160Q12769 1436 aa16.66■□□□□ 0.26
CAMTA2-209ENST00000573004 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
CAMTA2-209ENST00000573004 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
CAMTA2-209ENST00000573004 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
CAMTA2-209ENST00000573004 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
CAMTA2-209ENST00000573004 KIF13AQ9H1H9 1805 aa16.47■□□□□ 0.23
CAMTA2-209ENST00000573004 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
CAMTA2-209ENST00000573004 PRG4Q92954 1404 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms