RNA–Protein interactions for RNA: ENST00000572875.1

SGSM2-205, Transcript of small G protein signaling modulator 2, humanhuman

TSL 3

Gene SGSM2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM2-205ENST00000572875 NISCHQ9Y2I1 1504 aa58.98■■■■■ 7.03
SGSM2-205ENST00000572875 CCDC180Q9P1Z9 1646 aa52.49■■■■■ 5.99
SGSM2-205ENST00000572875 ABCC9O60706 1549 aa52.29■■■■■ 5.96
SGSM2-205ENST00000572875 RB1CC1Q8TDY2 1594 aa49.81■■■■■ 5.56
SGSM2-205ENST00000572875 NACADO15069 1562 aa49.53■■■■■ 5.52
SGSM2-205ENST00000572875 DCAF8L2P0C7V8 631 aa49.47■■■■■ 5.51
SGSM2-205ENST00000572875 ZCCHC6Q5VYS8 1495 aaKnown RBP49.06■■■■■ 5.44
SGSM2-205ENST00000572875 MYO15BQ96JP2 1530 aa48.97■■■■■ 5.43
SGSM2-205ENST00000572875 DNAJC5BQ9UF47 199 aa48.87■■■■■ 5.41
SGSM2-205ENST00000572875 UNC13AQ9UPW8 1703 aa48.86■■■■■ 5.41
SGSM2-205ENST00000572875 PABPN1Q86U42 306 aaKnown RBP eCLIP48.73■■■■■ 5.39
SGSM2-205ENST00000572875 DCAF1Q9Y4B6 1507 aa48.7■■■■■ 5.39
SGSM2-205ENST00000572875 BICRAQ9NZM4 1560 aa48.47■■■■■ 5.35
SGSM2-205ENST00000572875 SCRIBQ14160 1630 aa47.97■■■■■ 5.27
SGSM2-205ENST00000572875 SHROOM4Q9ULL8 1493 aa47.65■■■■■ 5.22
SGSM2-205ENST00000572875 CC2D2AQ9P2K1 1620 aa47.25■■■■■ 5.15
SGSM2-205ENST00000572875 EIF4G1Q04637 1599 aaKnown RBP47.2■■■■■ 5.15
SGSM2-205ENST00000572875 CECR2Q9BXF3 1484 aa47.03■■■■■ 5.12
SGSM2-205ENST00000572875 SMARCA4P51532 1647 aa45.82■■■■■ 4.93
SGSM2-205ENST00000572875 NCAPD3P42695 1498 aa45.73■■■■■ 4.91
SGSM2-205ENST00000572875 BAZ1AQ9NRL2 1556 aaPredicted RBP45.69■■■■■ 4.9
SGSM2-205ENST00000572875 ATAD2BQ9ULI0 1458 aa45.68■■■■■ 4.9
SGSM2-205ENST00000572875 SMARCA2P51531 1590 aa45.5■■■■■ 4.87
SGSM2-205ENST00000572875 MROH2BQ7Z745 1585 aa45.5■■■■■ 4.87
SGSM2-205ENST00000572875 HMGXB3Q12766 1538 aa45.42■■■■■ 4.86
SGSM2-205ENST00000572875 PEG3Q9GZU2 1588 aa45.33■■■■■ 4.85
SGSM2-205ENST00000572875 BAZ1BQ9UIG0 1483 aaKnown RBP45.22■■■■■ 4.83
SGSM2-205ENST00000572875 ERCC6Q03468 1493 aa45.05■■■■■ 4.8
SGSM2-205ENST00000572875 WIZO95785 1651 aa45.04■■■■■ 4.8
SGSM2-205ENST00000572875 NESP48681 1621 aa45.04■■■■■ 4.8
SGSM2-205ENST00000572875 CUX2O14529 1486 aa44.86■■■■■ 4.77
SGSM2-205ENST00000572875 RSF1Q96T23 1441 aaPredicted RBP44.86■■■■■ 4.77
SGSM2-205ENST00000572875 LAMC3Q9Y6N6 1575 aa44.65■■■■■ 4.74
SGSM2-205ENST00000572875 DNAJC5Q9H3Z4 198 aa44.56■■■■■ 4.72
SGSM2-205ENST00000572875 THOC2Q8NI27 1593 aaKnown RBP44.51■■■■■ 4.72
SGSM2-205ENST00000572875 KIF21AQ7Z4S6 1674 aa44.47■■■■■ 4.71
SGSM2-205ENST00000572875 TOP2AP11388 1531 aaKnown RBP44.44■■■■■ 4.7
SGSM2-205ENST00000572875 PDS5BQ9NTI5 1447 aa44.35■■■■■ 4.69
SGSM2-205ENST00000572875 CADPSQ9ULU8 1353 aa44.35■■■■■ 4.69
SGSM2-205ENST00000572875 MRC2Q9UBG0 1479 aa44.01■■■■■ 4.64
SGSM2-205ENST00000572875 CCDC88BA6NC98 1476 aa43.97■■■■■ 4.63
SGSM2-205ENST00000572875 CFTRP13569 1480 aa43.96■■■■■ 4.63
SGSM2-205ENST00000572875 WDR62O43379 1518 aa43.91■■■■■ 4.62
SGSM2-205ENST00000572875 FANCD2Q9BXW9 1451 aa43.88■■■■■ 4.61
SGSM2-205ENST00000572875 CEP164Q9UPV0 1460 aa43.88■■■■■ 4.61
SGSM2-205ENST00000572875 PRDM2Q13029 1718 aa43.65■■■■■ 4.58
SGSM2-205ENST00000572875 SUPT5HO00267 1087 aaKnown RBP43.62■■■■■ 4.57
SGSM2-205ENST00000572875 URB2Q14146 1524 aaKnown RBP43.55■■■■■ 4.56
SGSM2-205ENST00000572875 TOPBP1Q92547 1522 aa43.1■■■■■ 4.49
SGSM2-205ENST00000572875 ZNF608Q9ULD9 1512 aaPredicted RBP42.99■■■■■ 4.47
SGSM2-205ENST00000572875 IFT140Q96RY7 1462 aa42.98■■■■■ 4.47
SGSM2-205ENST00000572875 DNMBPQ6XZF7 1577 aa42.97■■■■■ 4.47
SGSM2-205ENST00000572875 ABCC8Q09428 1581 aa42.96■■■■■ 4.47
SGSM2-205ENST00000572875 OSCARQ8IYS5 282 aa42.84■■■■■ 4.45
SGSM2-205ENST00000572875 TRIM41Q8WV44 630 aa42.75■■■■■ 4.43
SGSM2-205ENST00000572875 EIF4G3O43432 1585 aaKnown RBP42.73■■■■■ 4.43
SGSM2-205ENST00000572875 TARBP1Q13395 1621 aaKnown RBP42.72■■■■■ 4.43
SGSM2-205ENST00000572875 POLA1P09884 1462 aaPredicted RBP42.68■■■■■ 4.42
SGSM2-205ENST00000572875 CUX1P39880 1505 aa42.68■■■■■ 4.42
SGSM2-205ENST00000572875 AQRO60306 1485 aaKnown RBP eCLIP42.6■■■■■ 4.41
SGSM2-205ENST00000572875 FGD5Q6ZNL6 1462 aa42.55■■■■■ 4.4
SGSM2-205ENST00000572875 RAD54L2Q9Y4B4 1467 aa42.55■■■■■ 4.4
SGSM2-205ENST00000572875 SOGA1O94964 1423 aa42.51■■■■■ 4.4
SGSM2-205ENST00000572875 CHD1O14646 1710 aa42.41■■■■■ 4.38
SGSM2-205ENST00000572875 RIMBP3CA6NJZ7 1639 aa42.37■■■■■ 4.37
SGSM2-205ENST00000572875 RIMBP3BA6NNM3 1639 aa42.37■■■■■ 4.37
SGSM2-205ENST00000572875 RIMBP3Q9UFD9 1639 aa42.37■■■■■ 4.37
SGSM2-205ENST00000572875 TDRD9Q8NDG6 1382 aaKnown RBP42.37■■■■■ 4.37
SGSM2-205ENST00000572875 WRNQ14191 1432 aaPredicted RBP eCLIP42.28■■■■■ 4.36
SGSM2-205ENST00000572875 SYNJ1O43426 1573 aa42.25■■■■■ 4.35
SGSM2-205ENST00000572875 ARHGEF11O15085 1522 aa42.24■■■■■ 4.35
SGSM2-205ENST00000572875 BIVM-ERCC5R4GMW8 1640 aa42.24■■■■■ 4.35
SGSM2-205ENST00000572875 WDR97A6NE52 1622 aa42.23■■■■■ 4.35
SGSM2-205ENST00000572875 TOP2BQ02880 1626 aa42.22■■■■■ 4.35
SGSM2-205ENST00000572875 FBLN2P98095 1184 aa42.2■■■■■ 4.35
SGSM2-205ENST00000572875 SNAPC4Q5SXM2 1469 aa42.17■■■■■ 4.34
SGSM2-205ENST00000572875 ABCA10Q8WWZ4 1543 aa42.09■■■■■ 4.33
SGSM2-205ENST00000572875 GRIN2BQ13224 1484 aa42.04■■■■■ 4.32
SGSM2-205ENST00000572875 GAPVD1Q14C86 1478 aa42■■■■■ 4.31
SGSM2-205ENST00000572875 MAGI1Q96QZ7 1491 aaPredicted RBP42■■■■■ 4.31
SGSM2-205ENST00000572875 PBRM1Q86U86 1689 aa41.98■■■■■ 4.31
SGSM2-205ENST00000572875 ABCA5Q8WWZ7 1642 aa41.97■■■■■ 4.31
SGSM2-205ENST00000572875 CHMP7Q8WUX9 453 aaPredicted RBP41.9■■■■■ 4.3
SGSM2-205ENST00000572875 CLASP1Q7Z460 1538 aa41.89■■■■■ 4.3
SGSM2-205ENST00000572875 CYB5RLQ6IPT4 315 aa41.88■■■■■ 4.29
SGSM2-205ENST00000572875 SYNJ2O15056 1496 aa41.87■■■■■ 4.29
SGSM2-205ENST00000572875 ARAP1Q96P48 1450 aa41.87■■■■■ 4.29
SGSM2-205ENST00000572875 ADAMTS12P58397 1594 aa41.58■■■■■ 4.25
SGSM2-205ENST00000572875 ERICH3Q5RHP9 1530 aa41.57■■■■■ 4.25
SGSM2-205ENST00000572875 GRIN2AQ12879 1464 aa41.53■■■■■ 4.24
SGSM2-205ENST00000572875 FHAD1B1AJZ9 1412 aa41.47■■■■■ 4.23
SGSM2-205ENST00000572875 CEP170Q5SW79 1584 aa41.42■■■■■ 4.22
SGSM2-205ENST00000572875 NUP160Q12769 1436 aa41.38■■■■■ 4.22
SGSM2-205ENST00000572875 KIF27Q86VH2 1401 aa41.38■■■■■ 4.22
SGSM2-205ENST00000572875 ERCC6L2Q5T890 1561 aa41.33■■■■■ 4.21
SGSM2-205ENST00000572875 IGF1RP08069 1367 aa41.31■■■■■ 4.2
SGSM2-205ENST00000572875 TRHP20396 242 aaPredicted RBP41.28■■■■■ 4.2
SGSM2-205ENST00000572875 SHROOM2Q13796 1616 aa41.19■■■■■ 4.18
SGSM2-205ENST00000572875 CUL7Q14999 1698 aa41.16■■■■■ 4.18
SGSM2-205ENST00000572875 RUSC2Q8N2Y8 1516 aa41.09■■■■■ 4.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms