RNA–Protein interactions for RNA: ENST00000572840.1

RFWD3-206, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-206ENST00000572840 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
RFWD3-206ENST00000572840 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
RFWD3-206ENST00000572840 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
RFWD3-206ENST00000572840 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
RFWD3-206ENST00000572840 ABCC9O60706 1549 aa21.2■□□□□ 0.98
RFWD3-206ENST00000572840 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
RFWD3-206ENST00000572840 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
RFWD3-206ENST00000572840 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
RFWD3-206ENST00000572840 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
RFWD3-206ENST00000572840 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
RFWD3-206ENST00000572840 NACADO15069 1562 aa19.72■□□□□ 0.75
RFWD3-206ENST00000572840 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
RFWD3-206ENST00000572840 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
RFWD3-206ENST00000572840 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
RFWD3-206ENST00000572840 FOXD1Q16676 465 aa19.48■□□□□ 0.71
RFWD3-206ENST00000572840 ADRA2BP18089 450 aa19.43■□□□□ 0.7
RFWD3-206ENST00000572840 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
RFWD3-206ENST00000572840 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
RFWD3-206ENST00000572840 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
RFWD3-206ENST00000572840 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
RFWD3-206ENST00000572840 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
RFWD3-206ENST00000572840 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
RFWD3-206ENST00000572840 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
RFWD3-206ENST00000572840 SCRIBQ14160 1630 aa19■□□□□ 0.63
RFWD3-206ENST00000572840 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
RFWD3-206ENST00000572840 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
RFWD3-206ENST00000572840 KCNA4P22459 653 aa18.85■□□□□ 0.61
RFWD3-206ENST00000572840 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
RFWD3-206ENST00000572840 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
RFWD3-206ENST00000572840 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
RFWD3-206ENST00000572840 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
RFWD3-206ENST00000572840 CUX2O14529 1486 aa18.33■□□□□ 0.53
RFWD3-206ENST00000572840 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
RFWD3-206ENST00000572840 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
RFWD3-206ENST00000572840 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
RFWD3-206ENST00000572840 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
RFWD3-206ENST00000572840 NESP48681 1621 aa18.13■□□□□ 0.49
RFWD3-206ENST00000572840 SLC4A1APQ9BWU0 796 aaKnown RBP18.08■□□□□ 0.48
RFWD3-206ENST00000572840 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
RFWD3-206ENST00000572840 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
RFWD3-206ENST00000572840 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
RFWD3-206ENST00000572840 THOC2Q8NI27 1593 aaKnown RBP17.98■□□□□ 0.47
RFWD3-206ENST00000572840 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
RFWD3-206ENST00000572840 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
RFWD3-206ENST00000572840 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
RFWD3-206ENST00000572840 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
RFWD3-206ENST00000572840 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
RFWD3-206ENST00000572840 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
RFWD3-206ENST00000572840 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
RFWD3-206ENST00000572840 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
RFWD3-206ENST00000572840 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
RFWD3-206ENST00000572840 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
RFWD3-206ENST00000572840 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
RFWD3-206ENST00000572840 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
RFWD3-206ENST00000572840 MSH5O43196 834 aa17.67■□□□□ 0.42
RFWD3-206ENST00000572840 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
RFWD3-206ENST00000572840 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
RFWD3-206ENST00000572840 WDR62O43379 1518 aa17.62■□□□□ 0.41
RFWD3-206ENST00000572840 WIZO95785 1651 aa17.57■□□□□ 0.4
RFWD3-206ENST00000572840 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
RFWD3-206ENST00000572840 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
RFWD3-206ENST00000572840 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
RFWD3-206ENST00000572840 CFTRP13569 1480 aa17.39■□□□□ 0.37
RFWD3-206ENST00000572840 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
RFWD3-206ENST00000572840 ZBTB22O15209 634 aa17.37■□□□□ 0.37
RFWD3-206ENST00000572840 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
RFWD3-206ENST00000572840 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
RFWD3-206ENST00000572840 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
RFWD3-206ENST00000572840 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
RFWD3-206ENST00000572840 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
RFWD3-206ENST00000572840 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
RFWD3-206ENST00000572840 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
RFWD3-206ENST00000572840 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
RFWD3-206ENST00000572840 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
RFWD3-206ENST00000572840 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
RFWD3-206ENST00000572840 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
RFWD3-206ENST00000572840 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
RFWD3-206ENST00000572840 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
RFWD3-206ENST00000572840 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
RFWD3-206ENST00000572840 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
RFWD3-206ENST00000572840 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
RFWD3-206ENST00000572840 CHD1O14646 1710 aa17.05■□□□□ 0.32
RFWD3-206ENST00000572840 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
RFWD3-206ENST00000572840 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.328e-11■■■■■ 32.8
RFWD3-206ENST00000572840 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
RFWD3-206ENST00000572840 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
RFWD3-206ENST00000572840 FBLN2P98095 1184 aa17.01■□□□□ 0.31
RFWD3-206ENST00000572840 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
RFWD3-206ENST00000572840 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
RFWD3-206ENST00000572840 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
RFWD3-206ENST00000572840 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
RFWD3-206ENST00000572840 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
RFWD3-206ENST00000572840 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
RFWD3-206ENST00000572840 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
RFWD3-206ENST00000572840 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
RFWD3-206ENST00000572840 SOGA1O94964 1423 aa16.84■□□□□ 0.29
RFWD3-206ENST00000572840 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
RFWD3-206ENST00000572840 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
RFWD3-206ENST00000572840 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
RFWD3-206ENST00000572840 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms