RNA–Protein interactions for RNA: ENST00000572709.5

SRR-203, Transcript of serine racemase, humanhuman

TSL 1 (best)

Gene SRR, Length 298 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRR-203ENST00000572709 NISCHQ9Y2I1 1504 aa32.2■■■□□ 2.74
SRR-203ENST00000572709 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
SRR-203ENST00000572709 ABCC9O60706 1549 aa27.9■■■□□ 2.06
SRR-203ENST00000572709 NACADO15069 1562 aa26.95■■□□□ 1.9
SRR-203ENST00000572709 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.9
SRR-203ENST00000572709 MYO15BQ96JP2 1530 aa26.89■■□□□ 1.89
SRR-203ENST00000572709 ZCCHC6Q5VYS8 1495 aaKnown RBP26.84■■□□□ 1.89
SRR-203ENST00000572709 DCAF1Q9Y4B6 1507 aa26.74■■□□□ 1.87
SRR-203ENST00000572709 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
SRR-203ENST00000572709 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
SRR-203ENST00000572709 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
SRR-203ENST00000572709 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
SRR-203ENST00000572709 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
SRR-203ENST00000572709 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
SRR-203ENST00000572709 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
SRR-203ENST00000572709 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
SRR-203ENST00000572709 CC2D2AQ9P2K1 1620 aa25.28■■□□□ 1.64
SRR-203ENST00000572709 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
SRR-203ENST00000572709 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
SRR-203ENST00000572709 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
SRR-203ENST00000572709 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
SRR-203ENST00000572709 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
SRR-203ENST00000572709 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
SRR-203ENST00000572709 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
SRR-203ENST00000572709 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
SRR-203ENST00000572709 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
SRR-203ENST00000572709 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
SRR-203ENST00000572709 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
SRR-203ENST00000572709 WIZO95785 1651 aa24.45■■□□□ 1.5
SRR-203ENST00000572709 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
SRR-203ENST00000572709 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
SRR-203ENST00000572709 NESP48681 1621 aa24.14■■□□□ 1.46
SRR-203ENST00000572709 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
SRR-203ENST00000572709 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
SRR-203ENST00000572709 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
SRR-203ENST00000572709 CFTRP13569 1480 aa24■■□□□ 1.43
SRR-203ENST00000572709 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
SRR-203ENST00000572709 CUX2O14529 1486 aa23.93■■□□□ 1.42
SRR-203ENST00000572709 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
SRR-203ENST00000572709 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
SRR-203ENST00000572709 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
SRR-203ENST00000572709 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
SRR-203ENST00000572709 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
SRR-203ENST00000572709 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
SRR-203ENST00000572709 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
SRR-203ENST00000572709 WDR62O43379 1518 aa23.7■■□□□ 1.38
SRR-203ENST00000572709 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
SRR-203ENST00000572709 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
SRR-203ENST00000572709 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
SRR-203ENST00000572709 DNMBPQ6XZF7 1577 aa23.42■■□□□ 1.34
SRR-203ENST00000572709 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
SRR-203ENST00000572709 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
SRR-203ENST00000572709 CUX1P39880 1505 aa23.23■■□□□ 1.31
SRR-203ENST00000572709 TARBP1Q13395 1621 aaKnown RBP23.18■■□□□ 1.3
SRR-203ENST00000572709 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
SRR-203ENST00000572709 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
SRR-203ENST00000572709 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
SRR-203ENST00000572709 SOGA1O94964 1423 aa23.13■■□□□ 1.29
SRR-203ENST00000572709 WRNQ14191 1432 aaPredicted RBP eCLIP23.12■■□□□ 1.29
SRR-203ENST00000572709 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
SRR-203ENST00000572709 TOP2BQ02880 1626 aa23.08■■□□□ 1.28
SRR-203ENST00000572709 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
SRR-203ENST00000572709 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
SRR-203ENST00000572709 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
SRR-203ENST00000572709 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
SRR-203ENST00000572709 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
SRR-203ENST00000572709 ABCA10Q8WWZ4 1543 aa22.99■■□□□ 1.27
SRR-203ENST00000572709 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
SRR-203ENST00000572709 GRIN2BQ13224 1484 aa22.89■■□□□ 1.25
SRR-203ENST00000572709 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
SRR-203ENST00000572709 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
SRR-203ENST00000572709 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
SRR-203ENST00000572709 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
SRR-203ENST00000572709 SNAPC4Q5SXM2 1469 aa22.81■■□□□ 1.24
SRR-203ENST00000572709 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
SRR-203ENST00000572709 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
SRR-203ENST00000572709 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
SRR-203ENST00000572709 CHD1O14646 1710 aa22.72■■□□□ 1.23
SRR-203ENST00000572709 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
SRR-203ENST00000572709 FBLN2P98095 1184 aa22.66■■□□□ 1.22
SRR-203ENST00000572709 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
SRR-203ENST00000572709 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
SRR-203ENST00000572709 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
SRR-203ENST00000572709 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
SRR-203ENST00000572709 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
SRR-203ENST00000572709 IGF1RP08069 1367 aa22.54■■□□□ 1.2
SRR-203ENST00000572709 NUP160Q12769 1436 aa22.52■■□□□ 1.2
SRR-203ENST00000572709 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
SRR-203ENST00000572709 ARHGEF11O15085 1522 aa22.5■■□□□ 1.19
SRR-203ENST00000572709 CUL7Q14999 1698 aa22.49■■□□□ 1.19
SRR-203ENST00000572709 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
SRR-203ENST00000572709 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
SRR-203ENST00000572709 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
SRR-203ENST00000572709 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
SRR-203ENST00000572709 CARMIL1Q5VZK9 1371 aa22.39■■□□□ 1.18
SRR-203ENST00000572709 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
SRR-203ENST00000572709 SHROOM2Q13796 1616 aa22.33■■□□□ 1.17
SRR-203ENST00000572709 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
SRR-203ENST00000572709 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
SRR-203ENST00000572709 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms