RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
PRPF8-203ENST00000571958 ABCC9O60706 1549 aa23.09■■□□□ 1.29
PRPF8-203ENST00000571958 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
PRPF8-203ENST00000571958 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
PRPF8-203ENST00000571958 DNAJC5BQ9UF47 199 aa21.76■■□□□ 1.07
PRPF8-203ENST00000571958 NACADO15069 1562 aa21.7■■□□□ 1.06
PRPF8-203ENST00000571958 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
PRPF8-203ENST00000571958 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
PRPF8-203ENST00000571958 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
PRPF8-203ENST00000571958 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
PRPF8-203ENST00000571958 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
PRPF8-203ENST00000571958 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
PRPF8-203ENST00000571958 DCAF1Q9Y4B6 1507 aa21.02■□□□□ 0.96
PRPF8-203ENST00000571958 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
PRPF8-203ENST00000571958 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
PRPF8-203ENST00000571958 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
PRPF8-203ENST00000571958 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
PRPF8-203ENST00000571958 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
PRPF8-203ENST00000571958 DNAJC5Q9H3Z4 198 aa20.06■□□□□ 0.8
PRPF8-203ENST00000571958 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
PRPF8-203ENST00000571958 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
PRPF8-203ENST00000571958 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
PRPF8-203ENST00000571958 CUX2O14529 1486 aa19.93■□□□□ 0.78
PRPF8-203ENST00000571958 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
PRPF8-203ENST00000571958 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
PRPF8-203ENST00000571958 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
PRPF8-203ENST00000571958 NESP48681 1621 aa19.8■□□□□ 0.76
PRPF8-203ENST00000571958 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
PRPF8-203ENST00000571958 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
PRPF8-203ENST00000571958 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
PRPF8-203ENST00000571958 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
PRPF8-203ENST00000571958 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
PRPF8-203ENST00000571958 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
PRPF8-203ENST00000571958 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
PRPF8-203ENST00000571958 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
PRPF8-203ENST00000571958 WIZO95785 1651 aa19.43■□□□□ 0.7
PRPF8-203ENST00000571958 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
PRPF8-203ENST00000571958 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
PRPF8-203ENST00000571958 WDR62O43379 1518 aa19.32■□□□□ 0.68
PRPF8-203ENST00000571958 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
PRPF8-203ENST00000571958 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
PRPF8-203ENST00000571958 CFTRP13569 1480 aa19.16■□□□□ 0.66
PRPF8-203ENST00000571958 RSF1Q96T23 1441 aaPredicted RBP19.16■□□□□ 0.66
PRPF8-203ENST00000571958 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
PRPF8-203ENST00000571958 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
PRPF8-203ENST00000571958 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.64
PRPF8-203ENST00000571958 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
PRPF8-203ENST00000571958 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
PRPF8-203ENST00000571958 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
PRPF8-203ENST00000571958 ZNF608Q9ULD9 1512 aaPredicted RBP18.87■□□□□ 0.61
PRPF8-203ENST00000571958 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
PRPF8-203ENST00000571958 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
PRPF8-203ENST00000571958 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
PRPF8-203ENST00000571958 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
PRPF8-203ENST00000571958 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
PRPF8-203ENST00000571958 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
PRPF8-203ENST00000571958 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
PRPF8-203ENST00000571958 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
PRPF8-203ENST00000571958 ARHGEF11O15085 1522 aa18.72■□□□□ 0.59
PRPF8-203ENST00000571958 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.58
PRPF8-203ENST00000571958 CHD1O14646 1710 aa18.7■□□□□ 0.58
PRPF8-203ENST00000571958 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
PRPF8-203ENST00000571958 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
PRPF8-203ENST00000571958 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
PRPF8-203ENST00000571958 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
PRPF8-203ENST00000571958 FBLN2P98095 1184 aa18.53■□□□□ 0.56
PRPF8-203ENST00000571958 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
PRPF8-203ENST00000571958 SOGA1O94964 1423 aa18.51■□□□□ 0.55
PRPF8-203ENST00000571958 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
PRPF8-203ENST00000571958 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
PRPF8-203ENST00000571958 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
PRPF8-203ENST00000571958 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
PRPF8-203ENST00000571958 CUX1P39880 1505 aa18.47■□□□□ 0.55
PRPF8-203ENST00000571958 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
PRPF8-203ENST00000571958 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
PRPF8-203ENST00000571958 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
PRPF8-203ENST00000571958 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
PRPF8-203ENST00000571958 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
PRPF8-203ENST00000571958 GRIN2BQ13224 1484 aa18.38■□□□□ 0.53
PRPF8-203ENST00000571958 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
PRPF8-203ENST00000571958 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
PRPF8-203ENST00000571958 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
PRPF8-203ENST00000571958 ABCA5Q8WWZ7 1642 aa18.3■□□□□ 0.52
PRPF8-203ENST00000571958 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
PRPF8-203ENST00000571958 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
PRPF8-203ENST00000571958 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
PRPF8-203ENST00000571958 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
PRPF8-203ENST00000571958 ERCC6L2Q5T890 1561 aa18.16■□□□□ 0.5
PRPF8-203ENST00000571958 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
PRPF8-203ENST00000571958 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
PRPF8-203ENST00000571958 CEP170Q5SW79 1584 aa18.13■□□□□ 0.49
PRPF8-203ENST00000571958 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
PRPF8-203ENST00000571958 NUP160Q12769 1436 aa18.1■□□□□ 0.49
PRPF8-203ENST00000571958 SHROOM2Q13796 1616 aa18.08■□□□□ 0.48
PRPF8-203ENST00000571958 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
PRPF8-203ENST00000571958 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
PRPF8-203ENST00000571958 KIF13AQ9H1H9 1805 aa17.95■□□□□ 0.46
PRPF8-203ENST00000571958 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
PRPF8-203ENST00000571958 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
PRPF8-203ENST00000571958 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms