RNA–Protein interactions for RNA: ENST00000571819.1

PAM16-203, Transcript of presequence translocase associated motor 16, humanhuman

TSL 5

Gene PAM16, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-203ENST00000571819 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
PAM16-203ENST00000571819 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
PAM16-203ENST00000571819 ABCC9O60706 1549 aa31.45■■■□□ 2.63
PAM16-203ENST00000571819 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.54
PAM16-203ENST00000571819 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
PAM16-203ENST00000571819 MYO15BQ96JP2 1530 aa30.64■■■□□ 2.5
PAM16-203ENST00000571819 NACADO15069 1562 aa30.64■■■□□ 2.5
PAM16-203ENST00000571819 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
PAM16-203ENST00000571819 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
PAM16-203ENST00000571819 DNAJC5BQ9UF47 199 aa30.17■■■□□ 2.42
PAM16-203ENST00000571819 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.38
PAM16-203ENST00000571819 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
PAM16-203ENST00000571819 BICRAQ9NZM4 1560 aa29.62■■■□□ 2.33
PAM16-203ENST00000571819 SHROOM4Q9ULL8 1493 aa29.41■■■□□ 2.3
PAM16-203ENST00000571819 PABPN1Q86U42 306 aaKnown RBP eCLIP29.37■■■□□ 2.29
PAM16-203ENST00000571819 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
PAM16-203ENST00000571819 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
PAM16-203ENST00000571819 BAZ1AQ9NRL2 1556 aaPredicted RBP28.66■■■□□ 2.18
PAM16-203ENST00000571819 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
PAM16-203ENST00000571819 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
PAM16-203ENST00000571819 MROH2BQ7Z745 1585 aa28.49■■■□□ 2.15
PAM16-203ENST00000571819 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
PAM16-203ENST00000571819 SMARCA2P51531 1590 aa28.33■■■□□ 2.13
PAM16-203ENST00000571819 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
PAM16-203ENST00000571819 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
PAM16-203ENST00000571819 WIZO95785 1651 aa28.23■■■□□ 2.11
PAM16-203ENST00000571819 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
PAM16-203ENST00000571819 HMGXB3Q12766 1538 aa28.2■■■□□ 2.1
PAM16-203ENST00000571819 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
PAM16-203ENST00000571819 BAZ1BQ9UIG0 1483 aaKnown RBP28.1■■■□□ 2.09
PAM16-203ENST00000571819 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
PAM16-203ENST00000571819 SUPT5HO00267 1087 aaKnown RBP27.8■■■□□ 2.04
PAM16-203ENST00000571819 CCDC88BA6NC98 1476 aa27.58■■■□□ 2.01
PAM16-203ENST00000571819 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
PAM16-203ENST00000571819 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
PAM16-203ENST00000571819 NESP48681 1621 aa27.37■■□□□ 1.97
PAM16-203ENST00000571819 CFTRP13569 1480 aa27.36■■□□□ 1.97
PAM16-203ENST00000571819 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
PAM16-203ENST00000571819 CUX2O14529 1486 aa27.35■■□□□ 1.97
PAM16-203ENST00000571819 PDS5BQ9NTI5 1447 aa27.17■■□□□ 1.94
PAM16-203ENST00000571819 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
PAM16-203ENST00000571819 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
PAM16-203ENST00000571819 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
PAM16-203ENST00000571819 CEP164Q9UPV0 1460 aa27.04■■□□□ 1.92
PAM16-203ENST00000571819 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
PAM16-203ENST00000571819 MRC2Q9UBG0 1479 aa26.91■■□□□ 1.9
PAM16-203ENST00000571819 WDR62O43379 1518 aa26.85■■□□□ 1.89
PAM16-203ENST00000571819 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
PAM16-203ENST00000571819 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
PAM16-203ENST00000571819 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
PAM16-203ENST00000571819 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
PAM16-203ENST00000571819 CUX1P39880 1505 aa26.72■■□□□ 1.87
PAM16-203ENST00000571819 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
PAM16-203ENST00000571819 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
PAM16-203ENST00000571819 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
PAM16-203ENST00000571819 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
PAM16-203ENST00000571819 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
PAM16-203ENST00000571819 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
PAM16-203ENST00000571819 FGD5Q6ZNL6 1462 aa26.54■■□□□ 1.84
PAM16-203ENST00000571819 TARBP1Q13395 1621 aaKnown RBP26.46■■□□□ 1.83
PAM16-203ENST00000571819 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
PAM16-203ENST00000571819 WDR97A6NE52 1622 aa26.42■■□□□ 1.82
PAM16-203ENST00000571819 SOGA1O94964 1423 aa26.38■■□□□ 1.81
PAM16-203ENST00000571819 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
PAM16-203ENST00000571819 ABCA10Q8WWZ4 1543 aa26.33■■□□□ 1.81
PAM16-203ENST00000571819 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
PAM16-203ENST00000571819 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
PAM16-203ENST00000571819 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
PAM16-203ENST00000571819 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
PAM16-203ENST00000571819 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
PAM16-203ENST00000571819 TDRD9Q8NDG6 1382 aaKnown RBP26.14■■□□□ 1.78
PAM16-203ENST00000571819 AQRO60306 1485 aaKnown RBP eCLIP26.13■■□□□ 1.775e-10■■■■■ 36.7
PAM16-203ENST00000571819 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
PAM16-203ENST00000571819 KIF27Q86VH2 1401 aa26.08■■□□□ 1.77
PAM16-203ENST00000571819 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
PAM16-203ENST00000571819 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
PAM16-203ENST00000571819 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
PAM16-203ENST00000571819 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
PAM16-203ENST00000571819 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
PAM16-203ENST00000571819 RUSC2Q8N2Y8 1516 aa25.96■■□□□ 1.75
PAM16-203ENST00000571819 ADAMTS12P58397 1594 aa25.95■■□□□ 1.74
PAM16-203ENST00000571819 EEA1Q15075 1411 aa25.94■■□□□ 1.74
PAM16-203ENST00000571819 CUL7Q14999 1698 aa25.93■■□□□ 1.74
PAM16-203ENST00000571819 IGF1RP08069 1367 aa25.88■■□□□ 1.73
PAM16-203ENST00000571819 CHD1O14646 1710 aa25.86■■□□□ 1.73
PAM16-203ENST00000571819 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
PAM16-203ENST00000571819 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
PAM16-203ENST00000571819 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
PAM16-203ENST00000571819 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
PAM16-203ENST00000571819 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
PAM16-203ENST00000571819 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
PAM16-203ENST00000571819 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
PAM16-203ENST00000571819 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
PAM16-203ENST00000571819 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
PAM16-203ENST00000571819 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
PAM16-203ENST00000571819 KIF21BO75037 1637 aa25.68■■□□□ 1.7
PAM16-203ENST00000571819 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
PAM16-203ENST00000571819 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
PAM16-203ENST00000571819 FBLN2P98095 1184 aa25.63■■□□□ 1.69
PAM16-203ENST00000571819 CEP170Q5SW79 1584 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms