RNA–Protein interactions for RNA: ENST00000571797.5

ABR-214, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-214ENST00000571797 NISCHQ9Y2I1 1504 aa42.66■■■■■ 4.42
ABR-214ENST00000571797 ABCC9O60706 1549 aa38.58■■■■□ 3.77
ABR-214ENST00000571797 CCDC180Q9P1Z9 1646 aa38.49■■■■□ 3.75
ABR-214ENST00000571797 RB1CC1Q8TDY2 1594 aa36.69■■■■□ 3.46
ABR-214ENST00000571797 DNAJC5BQ9UF47 199 aa36.54■■■■□ 3.44
ABR-214ENST00000571797 NACADO15069 1562 aa36.37■■■■□ 3.41
ABR-214ENST00000571797 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
ABR-214ENST00000571797 UNC13AQ9UPW8 1703 aa35.96■■■■□ 3.35
ABR-214ENST00000571797 PABPN1Q86U42 306 aaKnown RBP eCLIP35.82■■■■□ 3.32
ABR-214ENST00000571797 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
ABR-214ENST00000571797 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
ABR-214ENST00000571797 ZCCHC6Q5VYS8 1495 aaKnown RBP35.33■■■■□ 3.25
ABR-214ENST00000571797 DCAF1Q9Y4B6 1507 aa35.26■■■■□ 3.23
ABR-214ENST00000571797 SHROOM4Q9ULL8 1493 aa35.14■■■■□ 3.22
ABR-214ENST00000571797 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
ABR-214ENST00000571797 CC2D2AQ9P2K1 1620 aa34.9■■■■□ 3.18
ABR-214ENST00000571797 CECR2Q9BXF3 1484 aa34.78■■■■□ 3.16
ABR-214ENST00000571797 EIF4G1Q04637 1599 aaKnown RBP34.77■■■■□ 3.16
ABR-214ENST00000571797 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
ABR-214ENST00000571797 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
ABR-214ENST00000571797 ATAD2BQ9ULI0 1458 aa33.41■■■□□ 2.94
ABR-214ENST00000571797 CUX2O14529 1486 aa33.39■■■□□ 2.94
ABR-214ENST00000571797 SMARCA4P51532 1647 aa33.38■■■□□ 2.93
ABR-214ENST00000571797 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
ABR-214ENST00000571797 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
ABR-214ENST00000571797 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
ABR-214ENST00000571797 BAZ1AQ9NRL2 1556 aaPredicted RBP33.15■■■□□ 2.9
ABR-214ENST00000571797 NESP48681 1621 aa33.09■■■□□ 2.89
ABR-214ENST00000571797 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
ABR-214ENST00000571797 PEG3Q9GZU2 1588 aa33.06■■■□□ 2.88
ABR-214ENST00000571797 THOC2Q8NI27 1593 aaKnown RBP32.88■■■□□ 2.85
ABR-214ENST00000571797 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
ABR-214ENST00000571797 MROH2BQ7Z745 1585 aa32.87■■■□□ 2.85
ABR-214ENST00000571797 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
ABR-214ENST00000571797 PDS5BQ9NTI5 1447 aa32.62■■■□□ 2.81
ABR-214ENST00000571797 WIZO95785 1651 aa32.5■■■□□ 2.79
ABR-214ENST00000571797 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
ABR-214ENST00000571797 MRC2Q9UBG0 1479 aa32.39■■■□□ 2.78
ABR-214ENST00000571797 WDR62O43379 1518 aa32.36■■■□□ 2.77
ABR-214ENST00000571797 CEP164Q9UPV0 1460 aa32.22■■■□□ 2.75
ABR-214ENST00000571797 FANCD2Q9BXW9 1451 aa32.15■■■□□ 2.74
ABR-214ENST00000571797 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
ABR-214ENST00000571797 CFTRP13569 1480 aa32.1■■■□□ 2.73
ABR-214ENST00000571797 RSF1Q96T23 1441 aaPredicted RBP32.07■■■□□ 2.72
ABR-214ENST00000571797 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
ABR-214ENST00000571797 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
ABR-214ENST00000571797 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
ABR-214ENST00000571797 OSCARQ8IYS5 282 aa31.73■■■□□ 2.67
ABR-214ENST00000571797 CCDC88BA6NC98 1476 aa31.65■■■□□ 2.66
ABR-214ENST00000571797 IFT140Q96RY7 1462 aa31.57■■■□□ 2.64
ABR-214ENST00000571797 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
ABR-214ENST00000571797 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
ABR-214ENST00000571797 RIMBP3CA6NJZ7 1639 aa31.46■■■□□ 2.63
ABR-214ENST00000571797 RIMBP3BA6NNM3 1639 aa31.46■■■□□ 2.63
ABR-214ENST00000571797 RIMBP3Q9UFD9 1639 aa31.46■■■□□ 2.63
ABR-214ENST00000571797 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
ABR-214ENST00000571797 EIF4G3O43432 1585 aaKnown RBP31.42■■■□□ 2.62
ABR-214ENST00000571797 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
ABR-214ENST00000571797 ARHGEF11O15085 1522 aa31.31■■■□□ 2.6
ABR-214ENST00000571797 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
ABR-214ENST00000571797 CHD1O14646 1710 aa31.26■■■□□ 2.59
ABR-214ENST00000571797 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.58
ABR-214ENST00000571797 POLA1P09884 1462 aaPredicted RBP31.19■■■□□ 2.58
ABR-214ENST00000571797 RAD54L2Q9Y4B4 1467 aa31.04■■■□□ 2.56
ABR-214ENST00000571797 SOGA1O94964 1423 aa30.99■■■□□ 2.55
ABR-214ENST00000571797 WDR97A6NE52 1622 aa30.99■■■□□ 2.55
ABR-214ENST00000571797 CYB5RLQ6IPT4 315 aa30.99■■■□□ 2.55
ABR-214ENST00000571797 ARAP1Q96P48 1450 aa30.98■■■□□ 2.55
ABR-214ENST00000571797 FBLN2P98095 1184 aa30.97■■■□□ 2.55
ABR-214ENST00000571797 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
ABR-214ENST00000571797 TDRD9Q8NDG6 1382 aaKnown RBP30.94■■■□□ 2.54
ABR-214ENST00000571797 SNAPC4Q5SXM2 1469 aa30.91■■■□□ 2.54
ABR-214ENST00000571797 CUX1P39880 1505 aa30.9■■■□□ 2.54
ABR-214ENST00000571797 CLASP1Q7Z460 1538 aa30.86■■■□□ 2.53
ABR-214ENST00000571797 MAGI1Q96QZ7 1491 aaPredicted RBP30.83■■■□□ 2.53
ABR-214ENST00000571797 SYNJ1O43426 1573 aa30.8■■■□□ 2.52
ABR-214ENST00000571797 GRIN2BQ13224 1484 aa30.78■■■□□ 2.52
ABR-214ENST00000571797 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
ABR-214ENST00000571797 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
ABR-214ENST00000571797 TRHP20396 242 aaPredicted RBP30.72■■■□□ 2.51
ABR-214ENST00000571797 CHMP7Q8WUX9 453 aaPredicted RBP30.72■■■□□ 2.51
ABR-214ENST00000571797 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
ABR-214ENST00000571797 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
ABR-214ENST00000571797 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
ABR-214ENST00000571797 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
ABR-214ENST00000571797 GRIN2AQ12879 1464 aa30.41■■■□□ 2.46
ABR-214ENST00000571797 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
ABR-214ENST00000571797 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
ABR-214ENST00000571797 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
ABR-214ENST00000571797 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
ABR-214ENST00000571797 CEP170Q5SW79 1584 aa30.34■■■□□ 2.45
ABR-214ENST00000571797 ERCC6L2Q5T890 1561 aa30.33■■■□□ 2.45
ABR-214ENST00000571797 NUP160Q12769 1436 aa30.31■■■□□ 2.44
ABR-214ENST00000571797 SHROOM2Q13796 1616 aa30.26■■■□□ 2.44
ABR-214ENST00000571797 FHAD1B1AJZ9 1412 aa30.23■■■□□ 2.43
ABR-214ENST00000571797 ERICH3Q5RHP9 1530 aa30.22■■■□□ 2.43
ABR-214ENST00000571797 AEBP2Q6ZN18 517 aaPredicted RBP30.16■■■□□ 2.42
ABR-214ENST00000571797 KIF13AQ9H1H9 1805 aa30.01■■■□□ 2.4
ABR-214ENST00000571797 PRG4Q92954 1404 aaPredicted RBP29.99■■■□□ 2.39
ABR-214ENST00000571797 RUSC2Q8N2Y8 1516 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms