RNA–Protein interactions for RNA: ENST00000571543.1

ABR-213, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-213ENST00000571543 NISCHQ9Y2I1 1504 aa51.46■■■■■ 5.83
ABR-213ENST00000571543 CCDC180Q9P1Z9 1646 aa46.19■■■■■ 4.98
ABR-213ENST00000571543 ABCC9O60706 1549 aa45.89■■■■■ 4.94
ABR-213ENST00000571543 RB1CC1Q8TDY2 1594 aa43.8■■■■■ 4.6
ABR-213ENST00000571543 NACADO15069 1562 aa43.52■■■■■ 4.56
ABR-213ENST00000571543 DCAF8L2P0C7V8 631 aa43.28■■■■■ 4.52
ABR-213ENST00000571543 UNC13AQ9UPW8 1703 aa43.04■■■■■ 4.48
ABR-213ENST00000571543 MYO15BQ96JP2 1530 aa42.96■■■■■ 4.47
ABR-213ENST00000571543 DNAJC5BQ9UF47 199 aa42.85■■■■■ 4.45
ABR-213ENST00000571543 ZCCHC6Q5VYS8 1495 aaKnown RBP42.76■■■■■ 4.44
ABR-213ENST00000571543 PABPN1Q86U42 306 aaKnown RBP eCLIP42.66■■■■■ 4.42
ABR-213ENST00000571543 BICRAQ9NZM4 1560 aa42.57■■■■■ 4.41
ABR-213ENST00000571543 DCAF1Q9Y4B6 1507 aa42.51■■■■■ 4.39
ABR-213ENST00000571543 SCRIBQ14160 1630 aa42.06■■■■■ 4.32
ABR-213ENST00000571543 SHROOM4Q9ULL8 1493 aa41.95■■■■■ 4.31
ABR-213ENST00000571543 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
ABR-213ENST00000571543 EIF4G1Q04637 1599 aaKnown RBP41.49■■■■■ 4.23
ABR-213ENST00000571543 CECR2Q9BXF3 1484 aa41.32■■■■■ 4.2
ABR-213ENST00000571543 SMARCA4P51532 1647 aa40.14■■■■■ 4.02
ABR-213ENST00000571543 NCAPD3P42695 1498 aa40.12■■■■■ 4.01
ABR-213ENST00000571543 ATAD2BQ9ULI0 1458 aa40.05■■■■■ 4
ABR-213ENST00000571543 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
ABR-213ENST00000571543 HMGXB3Q12766 1538 aa39.92■■■■□ 3.98
ABR-213ENST00000571543 BAZ1AQ9NRL2 1556 aaPredicted RBP39.91■■■■□ 3.98
ABR-213ENST00000571543 PEG3Q9GZU2 1588 aa39.74■■■■□ 3.95
ABR-213ENST00000571543 BAZ1BQ9UIG0 1483 aaKnown RBP39.68■■■■□ 3.94
ABR-213ENST00000571543 MROH2BQ7Z745 1585 aa39.67■■■■□ 3.94
ABR-213ENST00000571543 ERCC6Q03468 1493 aa39.59■■■■□ 3.93
ABR-213ENST00000571543 NESP48681 1621 aa39.51■■■■□ 3.91
ABR-213ENST00000571543 CUX2O14529 1486 aa39.49■■■■□ 3.91
ABR-213ENST00000571543 LAMC3Q9Y6N6 1575 aa39.27■■■■□ 3.88
ABR-213ENST00000571543 WIZO95785 1651 aa39.23■■■■□ 3.87
ABR-213ENST00000571543 THOC2Q8NI27 1593 aaKnown RBP39.18■■■■□ 3.86
ABR-213ENST00000571543 DNAJC5Q9H3Z4 198 aa39.18■■■■□ 3.86
ABR-213ENST00000571543 KIF21AQ7Z4S6 1674 aa39.14■■■■□ 3.86
ABR-213ENST00000571543 RSF1Q96T23 1441 aaPredicted RBP39.08■■■■□ 3.85
ABR-213ENST00000571543 PDS5BQ9NTI5 1447 aa38.93■■■■□ 3.82
ABR-213ENST00000571543 CADPSQ9ULU8 1353 aa38.87■■■■□ 3.81
ABR-213ENST00000571543 TOP2AP11388 1531 aaKnown RBP38.75■■■■□ 3.79
ABR-213ENST00000571543 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
ABR-213ENST00000571543 WDR62O43379 1518 aa38.62■■■■□ 3.77
ABR-213ENST00000571543 CEP164Q9UPV0 1460 aa38.54■■■■□ 3.76
ABR-213ENST00000571543 CFTRP13569 1480 aa38.52■■■■□ 3.76
ABR-213ENST00000571543 FANCD2Q9BXW9 1451 aa38.49■■■■□ 3.75
ABR-213ENST00000571543 PRDM2Q13029 1718 aa38.41■■■■□ 3.74
ABR-213ENST00000571543 CCDC88BA6NC98 1476 aa38.35■■■■□ 3.73
ABR-213ENST00000571543 URB2Q14146 1524 aaKnown RBP38.21■■■■□ 3.71
ABR-213ENST00000571543 SUPT5HO00267 1087 aaKnown RBP37.87■■■■□ 3.65
ABR-213ENST00000571543 TOPBP1Q92547 1522 aa37.81■■■■□ 3.64
ABR-213ENST00000571543 IFT140Q96RY7 1462 aa37.73■■■■□ 3.63
ABR-213ENST00000571543 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
ABR-213ENST00000571543 ZNF608Q9ULD9 1512 aaPredicted RBP37.69■■■■□ 3.62
ABR-213ENST00000571543 ABCC8Q09428 1581 aa37.68■■■■□ 3.62
ABR-213ENST00000571543 EIF4G3O43432 1585 aaKnown RBP37.59■■■■□ 3.61
ABR-213ENST00000571543 OSCARQ8IYS5 282 aa37.57■■■■□ 3.6
ABR-213ENST00000571543 TRIM41Q8WV44 630 aa37.54■■■■□ 3.6
ABR-213ENST00000571543 TARBP1Q13395 1621 aaKnown RBP37.52■■■■□ 3.6
ABR-213ENST00000571543 POLA1P09884 1462 aaPredicted RBP37.43■■■■□ 3.58
ABR-213ENST00000571543 CHD1O14646 1710 aa37.34■■■■□ 3.57
ABR-213ENST00000571543 AQRO60306 1485 aaKnown RBP eCLIP37.33■■■■□ 3.57
ABR-213ENST00000571543 RIMBP3CA6NJZ7 1639 aa37.31■■■■□ 3.56
ABR-213ENST00000571543 RIMBP3BA6NNM3 1639 aa37.31■■■■□ 3.56
ABR-213ENST00000571543 RIMBP3Q9UFD9 1639 aa37.31■■■■□ 3.56
ABR-213ENST00000571543 RAD54L2Q9Y4B4 1467 aa37.27■■■■□ 3.56
ABR-213ENST00000571543 CUX1P39880 1505 aa37.24■■■■□ 3.55
ABR-213ENST00000571543 FGD5Q6ZNL6 1462 aa37.22■■■■□ 3.55
ABR-213ENST00000571543 SOGA1O94964 1423 aa37.19■■■■□ 3.54
ABR-213ENST00000571543 ARHGEF11O15085 1522 aa37.15■■■■□ 3.54
ABR-213ENST00000571543 WDR97A6NE52 1622 aa37.14■■■■□ 3.54
ABR-213ENST00000571543 TDRD9Q8NDG6 1382 aaKnown RBP37.08■■■■□ 3.53
ABR-213ENST00000571543 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.51
ABR-213ENST00000571543 FBLN2P98095 1184 aa36.95■■■■□ 3.51
ABR-213ENST00000571543 PBRM1Q86U86 1689 aa36.95■■■■□ 3.51
ABR-213ENST00000571543 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
ABR-213ENST00000571543 GRIN2BQ13224 1484 aa36.88■■■■□ 3.49
ABR-213ENST00000571543 WRNQ14191 1432 aaPredicted RBP eCLIP36.85■■■■□ 3.49
ABR-213ENST00000571543 ABCA5Q8WWZ7 1642 aa36.83■■■■□ 3.49
ABR-213ENST00000571543 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
ABR-213ENST00000571543 ABCA10Q8WWZ4 1543 aa36.8■■■■□ 3.48
ABR-213ENST00000571543 ARAP1Q96P48 1450 aa36.79■■■■□ 3.48
ABR-213ENST00000571543 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
ABR-213ENST00000571543 TOP2BQ02880 1626 aa36.78■■■■□ 3.48
ABR-213ENST00000571543 GAPVD1Q14C86 1478 aa36.77■■■■□ 3.48
ABR-213ENST00000571543 BIVM-ERCC5R4GMW8 1640 aa36.77■■■■□ 3.48
ABR-213ENST00000571543 SYNJ2O15056 1496 aa36.75■■■■□ 3.47
ABR-213ENST00000571543 CYB5RLQ6IPT4 315 aa36.7■■■■□ 3.47
ABR-213ENST00000571543 CHMP7Q8WUX9 453 aaPredicted RBP36.7■■■■□ 3.47
ABR-213ENST00000571543 ADAMTS12P58397 1594 aa36.53■■■■□ 3.44
ABR-213ENST00000571543 GRIN2AQ12879 1464 aa36.44■■■■□ 3.42
ABR-213ENST00000571543 CEP170Q5SW79 1584 aa36.37■■■■□ 3.41
ABR-213ENST00000571543 ERICH3Q5RHP9 1530 aa36.35■■■■□ 3.41
ABR-213ENST00000571543 FHAD1B1AJZ9 1412 aa36.3■■■■□ 3.4
ABR-213ENST00000571543 NUP160Q12769 1436 aa36.3■■■■□ 3.4
ABR-213ENST00000571543 ERCC6L2Q5T890 1561 aa36.27■■■■□ 3.4
ABR-213ENST00000571543 TRHP20396 242 aaPredicted RBP36.24■■■■□ 3.39
ABR-213ENST00000571543 SHROOM2Q13796 1616 aa36.23■■■■□ 3.39
ABR-213ENST00000571543 KIF27Q86VH2 1401 aa36.1■■■■□ 3.37
ABR-213ENST00000571543 IGF1RP08069 1367 aa36.04■■■■□ 3.36
ABR-213ENST00000571543 RUSC2Q8N2Y8 1516 aa36.03■■■■□ 3.36
ABR-213ENST00000571543 CUL7Q14999 1698 aa35.92■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms