RNA–Protein interactions for RNA: ENST00000571120.5

ABR-210, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-210ENST00000571120 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
ABR-210ENST00000571120 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
ABR-210ENST00000571120 ABCC9O60706 1549 aa26.65■■□□□ 1.86
ABR-210ENST00000571120 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
ABR-210ENST00000571120 NACADO15069 1562 aa25.44■■□□□ 1.66
ABR-210ENST00000571120 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
ABR-210ENST00000571120 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
ABR-210ENST00000571120 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
ABR-210ENST00000571120 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
ABR-210ENST00000571120 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
ABR-210ENST00000571120 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
ABR-210ENST00000571120 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
ABR-210ENST00000571120 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
ABR-210ENST00000571120 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
ABR-210ENST00000571120 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
ABR-210ENST00000571120 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
ABR-210ENST00000571120 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
ABR-210ENST00000571120 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
ABR-210ENST00000571120 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
ABR-210ENST00000571120 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
ABR-210ENST00000571120 ATAD2BQ9ULI0 1458 aa23.45■■□□□ 1.34
ABR-210ENST00000571120 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
ABR-210ENST00000571120 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
ABR-210ENST00000571120 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
ABR-210ENST00000571120 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
ABR-210ENST00000571120 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
ABR-210ENST00000571120 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
ABR-210ENST00000571120 NESP48681 1621 aa23■■□□□ 1.27
ABR-210ENST00000571120 WIZO95785 1651 aa23■■□□□ 1.27
ABR-210ENST00000571120 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
ABR-210ENST00000571120 LAMC3Q9Y6N6 1575 aa22.92■■□□□ 1.26
ABR-210ENST00000571120 CUX2O14529 1486 aa22.91■■□□□ 1.26
ABR-210ENST00000571120 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
ABR-210ENST00000571120 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
ABR-210ENST00000571120 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
ABR-210ENST00000571120 TOP2AP11388 1531 aaKnown RBP22.74■■□□□ 1.23
ABR-210ENST00000571120 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
ABR-210ENST00000571120 PDS5BQ9NTI5 1447 aa22.73■■□□□ 1.23
ABR-210ENST00000571120 CFTRP13569 1480 aa22.59■■□□□ 1.21
ABR-210ENST00000571120 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
ABR-210ENST00000571120 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
ABR-210ENST00000571120 WDR62O43379 1518 aa22.52■■□□□ 1.19
ABR-210ENST00000571120 FANCD2Q9BXW9 1451 aa22.5■■□□□ 1.19
ABR-210ENST00000571120 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
ABR-210ENST00000571120 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
ABR-210ENST00000571120 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
ABR-210ENST00000571120 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
ABR-210ENST00000571120 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
ABR-210ENST00000571120 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
ABR-210ENST00000571120 DNMBPQ6XZF7 1577 aa22.07■■□□□ 1.12
ABR-210ENST00000571120 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
ABR-210ENST00000571120 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
ABR-210ENST00000571120 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
ABR-210ENST00000571120 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
ABR-210ENST00000571120 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
ABR-210ENST00000571120 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
ABR-210ENST00000571120 CUX1P39880 1505 aa21.85■■□□□ 1.09
ABR-210ENST00000571120 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
ABR-210ENST00000571120 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
ABR-210ENST00000571120 RAD54L2Q9Y4B4 1467 aa21.8■■□□□ 1.08
ABR-210ENST00000571120 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
ABR-210ENST00000571120 SOGA1O94964 1423 aa21.77■■□□□ 1.08
ABR-210ENST00000571120 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
ABR-210ENST00000571120 TDRD9Q8NDG6 1382 aaKnown RBP21.68■■□□□ 1.06
ABR-210ENST00000571120 CHD1O14646 1710 aa21.67■■□□□ 1.06
ABR-210ENST00000571120 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
ABR-210ENST00000571120 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
ABR-210ENST00000571120 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
ABR-210ENST00000571120 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.05
ABR-210ENST00000571120 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.05
ABR-210ENST00000571120 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
ABR-210ENST00000571120 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.05
ABR-210ENST00000571120 GRIN2BQ13224 1484 aa21.58■■□□□ 1.04
ABR-210ENST00000571120 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
ABR-210ENST00000571120 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
ABR-210ENST00000571120 ABCA5Q8WWZ7 1642 aa21.56■■□□□ 1.04
ABR-210ENST00000571120 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
ABR-210ENST00000571120 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
ABR-210ENST00000571120 ARHGEF11O15085 1522 aa21.55■■□□□ 1.04
ABR-210ENST00000571120 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
ABR-210ENST00000571120 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.04
ABR-210ENST00000571120 SYNJ2O15056 1496 aa21.49■■□□□ 1.03
ABR-210ENST00000571120 FBLN2P98095 1184 aa21.48■■□□□ 1.03
ABR-210ENST00000571120 CLASP1Q7Z460 1538 aa21.47■■□□□ 1.03
ABR-210ENST00000571120 CHMP7Q8WUX9 453 aaPredicted RBP21.41■■□□□ 1.02
ABR-210ENST00000571120 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
ABR-210ENST00000571120 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
ABR-210ENST00000571120 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
ABR-210ENST00000571120 GRIN2AQ12879 1464 aa21.32■■□□□ 1
ABR-210ENST00000571120 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
ABR-210ENST00000571120 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
ABR-210ENST00000571120 NUP160Q12769 1436 aa21.26■□□□□ 0.99
ABR-210ENST00000571120 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
ABR-210ENST00000571120 SHROOM2Q13796 1616 aa21.16■□□□□ 0.98
ABR-210ENST00000571120 ERCC6L2Q5T890 1561 aa21.12■□□□□ 0.97
ABR-210ENST00000571120 KIF27Q86VH2 1401 aa21.11■□□□□ 0.97
ABR-210ENST00000571120 IGF1RP08069 1367 aa21.09■□□□□ 0.97
ABR-210ENST00000571120 CUL7Q14999 1698 aa21.07■□□□□ 0.96
ABR-210ENST00000571120 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
ABR-210ENST00000571120 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms