RNA–Protein interactions for RNA: ENST00000570773.5

ATP2A3-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 989 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-207ENST00000570773 NISCHQ9Y2I1 1504 aa34.77■■■■□ 3.16
ATP2A3-207ENST00000570773 CCDC180Q9P1Z9 1646 aa30.48■■■□□ 2.47
ATP2A3-207ENST00000570773 ABCC9O60706 1549 aa29.24■■■□□ 2.27
ATP2A3-207ENST00000570773 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
ATP2A3-207ENST00000570773 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
ATP2A3-207ENST00000570773 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
ATP2A3-207ENST00000570773 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
ATP2A3-207ENST00000570773 NACADO15069 1562 aa28.55■■■□□ 2.16
ATP2A3-207ENST00000570773 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
ATP2A3-207ENST00000570773 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
ATP2A3-207ENST00000570773 SCRIBQ14160 1630 aa27.93■■■□□ 2.06
ATP2A3-207ENST00000570773 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.02
ATP2A3-207ENST00000570773 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
ATP2A3-207ENST00000570773 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
ATP2A3-207ENST00000570773 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
ATP2A3-207ENST00000570773 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
ATP2A3-207ENST00000570773 MROH2BQ7Z745 1585 aa26.83■■□□□ 1.89
ATP2A3-207ENST00000570773 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
ATP2A3-207ENST00000570773 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
ATP2A3-207ENST00000570773 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
ATP2A3-207ENST00000570773 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
ATP2A3-207ENST00000570773 DNAJC5BQ9UF47 199 aa26.58■■□□□ 1.85
ATP2A3-207ENST00000570773 WIZO95785 1651 aa26.52■■□□□ 1.84
ATP2A3-207ENST00000570773 PEG3Q9GZU2 1588 aa26.52■■□□□ 1.84
ATP2A3-207ENST00000570773 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
ATP2A3-207ENST00000570773 SMARCA2P51531 1590 aa26.46■■□□□ 1.83
ATP2A3-207ENST00000570773 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
ATP2A3-207ENST00000570773 NCAPD3P42695 1498 aa26.39■■□□□ 1.82
ATP2A3-207ENST00000570773 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
ATP2A3-207ENST00000570773 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
ATP2A3-207ENST00000570773 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
ATP2A3-207ENST00000570773 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
ATP2A3-207ENST00000570773 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
ATP2A3-207ENST00000570773 CFTRP13569 1480 aa25.66■■□□□ 1.7
ATP2A3-207ENST00000570773 NESP48681 1621 aa25.52■■□□□ 1.68
ATP2A3-207ENST00000570773 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
ATP2A3-207ENST00000570773 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
ATP2A3-207ENST00000570773 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
ATP2A3-207ENST00000570773 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
ATP2A3-207ENST00000570773 PRDM2Q13029 1718 aa25.33■■□□□ 1.65
ATP2A3-207ENST00000570773 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
ATP2A3-207ENST00000570773 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
ATP2A3-207ENST00000570773 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
ATP2A3-207ENST00000570773 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
ATP2A3-207ENST00000570773 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
ATP2A3-207ENST00000570773 ERCC6Q03468 1493 aa25.12■■□□□ 1.61
ATP2A3-207ENST00000570773 CUX1P39880 1505 aa25.11■■□□□ 1.61
ATP2A3-207ENST00000570773 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
ATP2A3-207ENST00000570773 URB2Q14146 1524 aaKnown RBP25.06■■□□□ 1.6
ATP2A3-207ENST00000570773 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
ATP2A3-207ENST00000570773 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
ATP2A3-207ENST00000570773 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
ATP2A3-207ENST00000570773 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
ATP2A3-207ENST00000570773 BIVM-ERCC5R4GMW8 1640 aa25.02■■□□□ 1.6
ATP2A3-207ENST00000570773 WDR62O43379 1518 aa24.92■■□□□ 1.58
ATP2A3-207ENST00000570773 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
ATP2A3-207ENST00000570773 THOC2Q8NI27 1593 aaKnown RBP24.91■■□□□ 1.58
ATP2A3-207ENST00000570773 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
ATP2A3-207ENST00000570773 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
ATP2A3-207ENST00000570773 SOGA1O94964 1423 aa24.8■■□□□ 1.56
ATP2A3-207ENST00000570773 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
ATP2A3-207ENST00000570773 CUX2O14529 1486 aa24.75■■□□□ 1.55
ATP2A3-207ENST00000570773 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
ATP2A3-207ENST00000570773 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
ATP2A3-207ENST00000570773 RUSC2Q8N2Y8 1516 aa24.68■■□□□ 1.54
ATP2A3-207ENST00000570773 EEA1Q15075 1411 aa24.67■■□□□ 1.54
ATP2A3-207ENST00000570773 FAM9AQ8IZU1 332 aaPredicted RBP24.66■■□□□ 1.54
ATP2A3-207ENST00000570773 KIF27Q86VH2 1401 aa24.66■■□□□ 1.54
ATP2A3-207ENST00000570773 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
ATP2A3-207ENST00000570773 WDR97A6NE52 1622 aa24.58■■□□□ 1.53
ATP2A3-207ENST00000570773 TDRD9Q8NDG6 1382 aaKnown RBP24.58■■□□□ 1.53
ATP2A3-207ENST00000570773 CSRNP3Q8WYN3 585 aa24.57■■□□□ 1.52
ATP2A3-207ENST00000570773 ZNF608Q9ULD9 1512 aaPredicted RBP24.53■■□□□ 1.52
ATP2A3-207ENST00000570773 IGF1RP08069 1367 aa24.51■■□□□ 1.51
ATP2A3-207ENST00000570773 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
ATP2A3-207ENST00000570773 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
ATP2A3-207ENST00000570773 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.512e-6■■■■□ 23.2
ATP2A3-207ENST00000570773 GRIN2BQ13224 1484 aa24.4■■□□□ 1.5
ATP2A3-207ENST00000570773 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
ATP2A3-207ENST00000570773 EIF4G3O43432 1585 aaKnown RBP24.39■■□□□ 1.5
ATP2A3-207ENST00000570773 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
ATP2A3-207ENST00000570773 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
ATP2A3-207ENST00000570773 CARMIL1Q5VZK9 1371 aa24.36■■□□□ 1.49
ATP2A3-207ENST00000570773 KIF21BO75037 1637 aa24.31■■□□□ 1.48
ATP2A3-207ENST00000570773 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
ATP2A3-207ENST00000570773 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
ATP2A3-207ENST00000570773 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
ATP2A3-207ENST00000570773 CUL7Q14999 1698 aa24.27■■□□□ 1.48
ATP2A3-207ENST00000570773 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
ATP2A3-207ENST00000570773 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
ATP2A3-207ENST00000570773 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
ATP2A3-207ENST00000570773 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
ATP2A3-207ENST00000570773 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
ATP2A3-207ENST00000570773 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
ATP2A3-207ENST00000570773 SYNJ2O15056 1496 aa24.15■■□□□ 1.46
ATP2A3-207ENST00000570773 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
ATP2A3-207ENST00000570773 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
ATP2A3-207ENST00000570773 GRIN2AQ12879 1464 aa24.08■■□□□ 1.45
ATP2A3-207ENST00000570773 FBLN2P98095 1184 aa24.06■■□□□ 1.44
ATP2A3-207ENST00000570773 NUP160Q12769 1436 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms