RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
TRIM25-204ENST00000570749 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
TRIM25-204ENST00000570749 ABCC9O60706 1549 aa21.25■□□□□ 0.99
TRIM25-204ENST00000570749 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
TRIM25-204ENST00000570749 NACADO15069 1562 aa20.39■□□□□ 0.85
TRIM25-204ENST00000570749 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
TRIM25-204ENST00000570749 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
TRIM25-204ENST00000570749 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
TRIM25-204ENST00000570749 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
TRIM25-204ENST00000570749 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
TRIM25-204ENST00000570749 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
TRIM25-204ENST00000570749 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
TRIM25-204ENST00000570749 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
TRIM25-204ENST00000570749 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
TRIM25-204ENST00000570749 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
TRIM25-204ENST00000570749 EIF4G1Q04637 1599 aaKnown RBP19.32■□□□□ 0.68
TRIM25-204ENST00000570749 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
TRIM25-204ENST00000570749 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
TRIM25-204ENST00000570749 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
TRIM25-204ENST00000570749 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
TRIM25-204ENST00000570749 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
TRIM25-204ENST00000570749 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
TRIM25-204ENST00000570749 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
TRIM25-204ENST00000570749 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
TRIM25-204ENST00000570749 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.58
TRIM25-204ENST00000570749 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
TRIM25-204ENST00000570749 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
TRIM25-204ENST00000570749 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
TRIM25-204ENST00000570749 CUX2O14529 1486 aa18.4■□□□□ 0.54
TRIM25-204ENST00000570749 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
TRIM25-204ENST00000570749 WIZO95785 1651 aa18.28■□□□□ 0.52
TRIM25-204ENST00000570749 NESP48681 1621 aa18.28■□□□□ 0.52
TRIM25-204ENST00000570749 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
TRIM25-204ENST00000570749 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
TRIM25-204ENST00000570749 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
TRIM25-204ENST00000570749 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
TRIM25-204ENST00000570749 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
TRIM25-204ENST00000570749 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
TRIM25-204ENST00000570749 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
TRIM25-204ENST00000570749 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
TRIM25-204ENST00000570749 CFTRP13569 1480 aa18.02■□□□□ 0.48
TRIM25-204ENST00000570749 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
TRIM25-204ENST00000570749 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
TRIM25-204ENST00000570749 WDR62O43379 1518 aa18■□□□□ 0.47
TRIM25-204ENST00000570749 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
TRIM25-204ENST00000570749 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
TRIM25-204ENST00000570749 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
TRIM25-204ENST00000570749 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
TRIM25-204ENST00000570749 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
TRIM25-204ENST00000570749 DNMBPQ6XZF7 1577 aa17.65■□□□□ 0.42
TRIM25-204ENST00000570749 TOPBP1Q92547 1522 aa17.64■□□□□ 0.41
TRIM25-204ENST00000570749 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
TRIM25-204ENST00000570749 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
TRIM25-204ENST00000570749 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
TRIM25-204ENST00000570749 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
TRIM25-204ENST00000570749 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
TRIM25-204ENST00000570749 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
TRIM25-204ENST00000570749 SOGA1O94964 1423 aa17.38■□□□□ 0.37
TRIM25-204ENST00000570749 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
TRIM25-204ENST00000570749 CUX1P39880 1505 aa17.37■□□□□ 0.37
TRIM25-204ENST00000570749 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
TRIM25-204ENST00000570749 CHD1O14646 1710 aa17.34■□□□□ 0.37
TRIM25-204ENST00000570749 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■■■□□ 17.1
TRIM25-204ENST00000570749 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
TRIM25-204ENST00000570749 MAGI1Q96QZ7 1491 aaPredicted RBP17.28■□□□□ 0.36
TRIM25-204ENST00000570749 RIMBP3CA6NJZ7 1639 aa17.27■□□□□ 0.36
TRIM25-204ENST00000570749 RIMBP3BA6NNM3 1639 aa17.27■□□□□ 0.36
TRIM25-204ENST00000570749 RIMBP3Q9UFD9 1639 aa17.27■□□□□ 0.36
TRIM25-204ENST00000570749 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
TRIM25-204ENST00000570749 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
TRIM25-204ENST00000570749 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
TRIM25-204ENST00000570749 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
TRIM25-204ENST00000570749 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
TRIM25-204ENST00000570749 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
TRIM25-204ENST00000570749 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
TRIM25-204ENST00000570749 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
TRIM25-204ENST00000570749 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
TRIM25-204ENST00000570749 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
TRIM25-204ENST00000570749 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
TRIM25-204ENST00000570749 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
TRIM25-204ENST00000570749 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
TRIM25-204ENST00000570749 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
TRIM25-204ENST00000570749 FBLN2P98095 1184 aa17.16■□□□□ 0.34
TRIM25-204ENST00000570749 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
TRIM25-204ENST00000570749 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
TRIM25-204ENST00000570749 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
TRIM25-204ENST00000570749 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
TRIM25-204ENST00000570749 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
TRIM25-204ENST00000570749 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
TRIM25-204ENST00000570749 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
TRIM25-204ENST00000570749 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
TRIM25-204ENST00000570749 NUP160Q12769 1436 aa16.96■□□□□ 0.31
TRIM25-204ENST00000570749 CEP170Q5SW79 1584 aa16.93■□□□□ 0.3
TRIM25-204ENST00000570749 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
TRIM25-204ENST00000570749 CUL7Q14999 1698 aa16.89■□□□□ 0.29
TRIM25-204ENST00000570749 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
TRIM25-204ENST00000570749 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
TRIM25-204ENST00000570749 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.27
TRIM25-204ENST00000570749 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
TRIM25-204ENST00000570749 IGF1RP08069 1367 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms