RNA–Protein interactions for RNA: ENST00000570441.5

ABR-206, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-206ENST00000570441 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
ABR-206ENST00000570441 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
ABR-206ENST00000570441 ABCC9O60706 1549 aa23.08■■□□□ 1.29
ABR-206ENST00000570441 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
ABR-206ENST00000570441 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
ABR-206ENST00000570441 NACADO15069 1562 aa22.19■■□□□ 1.14
ABR-206ENST00000570441 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
ABR-206ENST00000570441 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
ABR-206ENST00000570441 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
ABR-206ENST00000570441 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
ABR-206ENST00000570441 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
ABR-206ENST00000570441 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
ABR-206ENST00000570441 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
ABR-206ENST00000570441 SHROOM4Q9ULL8 1493 aa21.28■■□□□ 1
ABR-206ENST00000570441 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
ABR-206ENST00000570441 EIF4G1Q04637 1599 aaKnown RBP20.97■□□□□ 0.95
ABR-206ENST00000570441 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
ABR-206ENST00000570441 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
ABR-206ENST00000570441 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
ABR-206ENST00000570441 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
ABR-206ENST00000570441 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
ABR-206ENST00000570441 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
ABR-206ENST00000570441 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
ABR-206ENST00000570441 NCAPD3P42695 1498 aa20.45■□□□□ 0.86
ABR-206ENST00000570441 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
ABR-206ENST00000570441 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
ABR-206ENST00000570441 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
ABR-206ENST00000570441 WIZO95785 1651 aa20.33■□□□□ 0.85
ABR-206ENST00000570441 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
ABR-206ENST00000570441 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
ABR-206ENST00000570441 NESP48681 1621 aa20■□□□□ 0.79
ABR-206ENST00000570441 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
ABR-206ENST00000570441 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
ABR-206ENST00000570441 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
ABR-206ENST00000570441 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
ABR-206ENST00000570441 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
ABR-206ENST00000570441 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
ABR-206ENST00000570441 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
ABR-206ENST00000570441 CFTRP13569 1480 aa19.77■□□□□ 0.76
ABR-206ENST00000570441 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
ABR-206ENST00000570441 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
ABR-206ENST00000570441 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
ABR-206ENST00000570441 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
ABR-206ENST00000570441 CUX2O14529 1486 aa19.62■□□□□ 0.73
ABR-206ENST00000570441 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
ABR-206ENST00000570441 WDR62O43379 1518 aa19.53■□□□□ 0.72
ABR-206ENST00000570441 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
ABR-206ENST00000570441 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
ABR-206ENST00000570441 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
ABR-206ENST00000570441 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
ABR-206ENST00000570441 CUX1P39880 1505 aa19.25■□□□□ 0.67
ABR-206ENST00000570441 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
ABR-206ENST00000570441 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
ABR-206ENST00000570441 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
ABR-206ENST00000570441 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
ABR-206ENST00000570441 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
ABR-206ENST00000570441 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
ABR-206ENST00000570441 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
ABR-206ENST00000570441 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
ABR-206ENST00000570441 SOGA1O94964 1423 aa19.11■□□□□ 0.65
ABR-206ENST00000570441 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
ABR-206ENST00000570441 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
ABR-206ENST00000570441 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
ABR-206ENST00000570441 WDR97A6NE52 1622 aa19.04■□□□□ 0.64
ABR-206ENST00000570441 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
ABR-206ENST00000570441 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
ABR-206ENST00000570441 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
ABR-206ENST00000570441 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
ABR-206ENST00000570441 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
ABR-206ENST00000570441 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
ABR-206ENST00000570441 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
ABR-206ENST00000570441 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
ABR-206ENST00000570441 CHD1O14646 1710 aa18.87■□□□□ 0.61
ABR-206ENST00000570441 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
ABR-206ENST00000570441 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
ABR-206ENST00000570441 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
ABR-206ENST00000570441 FBLN2P98095 1184 aa18.81■□□□□ 0.6
ABR-206ENST00000570441 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
ABR-206ENST00000570441 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
ABR-206ENST00000570441 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
ABR-206ENST00000570441 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
ABR-206ENST00000570441 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
ABR-206ENST00000570441 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
ABR-206ENST00000570441 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
ABR-206ENST00000570441 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
ABR-206ENST00000570441 IGF1RP08069 1367 aa18.62■□□□□ 0.57
ABR-206ENST00000570441 CUL7Q14999 1698 aa18.62■□□□□ 0.57
ABR-206ENST00000570441 CLASP1Q7Z460 1538 aa18.61■□□□□ 0.57
ABR-206ENST00000570441 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
ABR-206ENST00000570441 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
ABR-206ENST00000570441 RIMBP3CA6NJZ7 1639 aa18.56■□□□□ 0.56
ABR-206ENST00000570441 RIMBP3BA6NNM3 1639 aa18.56■□□□□ 0.56
ABR-206ENST00000570441 RIMBP3Q9UFD9 1639 aa18.56■□□□□ 0.56
ABR-206ENST00000570441 NUP160Q12769 1436 aa18.55■□□□□ 0.56
ABR-206ENST00000570441 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
ABR-206ENST00000570441 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
ABR-206ENST00000570441 CARMIL1Q5VZK9 1371 aa18.53■□□□□ 0.56
ABR-206ENST00000570441 RAPGEF2Q9Y4G8 1499 aa18.44■□□□□ 0.54
ABR-206ENST00000570441 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
ABR-206ENST00000570441 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms