RNA–Protein interactions for RNA: ENST00000570320.5

ARHGAP17-204, Transcript of Rho GTPase activating protein 17, humanhuman

TSL 2

Gene ARHGAP17, Length 2,847 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP17-204ENST00000570320 NISCHQ9Y2I1 1504 aa13.4□□□□□ -0.27
ARHGAP17-204ENST00000570320 CHIC1Q5VXU3 224 aa12□□□□□ -0.49
ARHGAP17-204ENST00000570320 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
ARHGAP17-204ENST00000570320 ABCC9O60706 1549 aa11.76□□□□□ -0.53
ARHGAP17-204ENST00000570320 CCDC180Q9P1Z9 1646 aa11.72□□□□□ -0.53
ARHGAP17-204ENST00000570320 MYT1Q01538 1121 aa11.64□□□□□ -0.55
ARHGAP17-204ENST00000570320 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
ARHGAP17-204ENST00000570320 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
ARHGAP17-204ENST00000570320 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
ARHGAP17-204ENST00000570320 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
ARHGAP17-204ENST00000570320 RB1CC1Q8TDY2 1594 aa11.18□□□□□ -0.62
ARHGAP17-204ENST00000570320 SHROOM4Q9ULL8 1493 aa11.08□□□□□ -0.64
ARHGAP17-204ENST00000570320 NACADO15069 1562 aa11.07□□□□□ -0.64
ARHGAP17-204ENST00000570320 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
ARHGAP17-204ENST00000570320 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
ARHGAP17-204ENST00000570320 DCAF1Q9Y4B6 1507 aa10.97□□□□□ -0.65
ARHGAP17-204ENST00000570320 UNC13AQ9UPW8 1703 aa10.94□□□□□ -0.66
ARHGAP17-204ENST00000570320 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
ARHGAP17-204ENST00000570320 MYO15BQ96JP2 1530 aa10.89□□□□□ -0.67
ARHGAP17-204ENST00000570320 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
ARHGAP17-204ENST00000570320 BICRAQ9NZM4 1560 aa10.85□□□□□ -0.67
ARHGAP17-204ENST00000570320 HRCP23327 699 aa10.83□□□□□ -0.68
ARHGAP17-204ENST00000570320 APLP2Q06481 763 aa10.79□□□□□ -0.68
ARHGAP17-204ENST00000570320 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
ARHGAP17-204ENST00000570320 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
ARHGAP17-204ENST00000570320 SCAF1Q9H7N4 1312 aaKnown RBP10.7□□□□□ -0.7
ARHGAP17-204ENST00000570320 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
ARHGAP17-204ENST00000570320 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
ARHGAP17-204ENST00000570320 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
ARHGAP17-204ENST00000570320 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
ARHGAP17-204ENST00000570320 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
ARHGAP17-204ENST00000570320 EIF4G1Q04637 1599 aaKnown RBP10.59□□□□□ -0.71
ARHGAP17-204ENST00000570320 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
ARHGAP17-204ENST00000570320 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
ARHGAP17-204ENST00000570320 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
ARHGAP17-204ENST00000570320 RSF1Q96T23 1441 aaPredicted RBP10.39□□□□□ -0.75
ARHGAP17-204ENST00000570320 PCGF6Q9BYE7 350 aa10.39□□□□□ -0.75
ARHGAP17-204ENST00000570320 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
ARHGAP17-204ENST00000570320 SMARCA4P51532 1647 aa10.32□□□□□ -0.76
ARHGAP17-204ENST00000570320 WIZO95785 1651 aa10.31□□□□□ -0.76
ARHGAP17-204ENST00000570320 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
ARHGAP17-204ENST00000570320 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
ARHGAP17-204ENST00000570320 DNAJC5Q9H3Z4 198 aa10.23□□□□□ -0.77
ARHGAP17-204ENST00000570320 POTEDQ86YR6 584 aa10.22□□□□□ -0.77
ARHGAP17-204ENST00000570320 NCAPD3P42695 1498 aa10.21□□□□□ -0.78
ARHGAP17-204ENST00000570320 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
ARHGAP17-204ENST00000570320 CUX2O14529 1486 aa10.19□□□□□ -0.78
ARHGAP17-204ENST00000570320 ACIN1Q9UKV3 1341 aaKnown RBP10.18□□□□□ -0.78
ARHGAP17-204ENST00000570320 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
ARHGAP17-204ENST00000570320 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
ARHGAP17-204ENST00000570320 SMARCA2P51531 1590 aa10.15□□□□□ -0.78
ARHGAP17-204ENST00000570320 HMGXB3Q12766 1538 aa10.15□□□□□ -0.78
ARHGAP17-204ENST00000570320 TOP2AP11388 1531 aaKnown RBP10.14□□□□□ -0.79
ARHGAP17-204ENST00000570320 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
ARHGAP17-204ENST00000570320 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
ARHGAP17-204ENST00000570320 ANP32EQ9BTT0 268 aa10.1□□□□□ -0.79
ARHGAP17-204ENST00000570320 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
ARHGAP17-204ENST00000570320 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
ARHGAP17-204ENST00000570320 CCDC88BA6NC98 1476 aa10.08□□□□□ -0.8
ARHGAP17-204ENST00000570320 GTF3C3Q9Y5Q9 886 aa10.08□□□□□ -0.8
ARHGAP17-204ENST00000570320 NESP48681 1621 aa10.08□□□□□ -0.8
ARHGAP17-204ENST00000570320 NEUROD1Q13562 356 aa10.07□□□□□ -0.8
ARHGAP17-204ENST00000570320 PLPPR3Q6T4P5 718 aa10.04□□□□□ -0.8
ARHGAP17-204ENST00000570320 THOC2Q8NI27 1593 aaKnown RBP10.03□□□□□ -0.8
ARHGAP17-204ENST00000570320 LAMC3Q9Y6N6 1575 aa10.01□□□□□ -0.81
ARHGAP17-204ENST00000570320 CSRNP3Q8WYN3 585 aa9.98□□□□□ -0.81
ARHGAP17-204ENST00000570320 KIF21AQ7Z4S6 1674 aa9.98□□□□□ -0.81
ARHGAP17-204ENST00000570320 LOC105371045A0A1W2PR82 267 aa9.95□□□□□ -0.82
ARHGAP17-204ENST00000570320 UBE2Q2Q8WVN8 375 aa9.95□□□□□ -0.82
ARHGAP17-204ENST00000570320 PDS5BQ9NTI5 1447 aa9.94□□□□□ -0.82
ARHGAP17-204ENST00000570320 TRIM41Q8WV44 630 aa9.91□□□□□ -0.82
ARHGAP17-204ENST00000570320 ABCC8Q09428 1581 aa9.9□□□□□ -0.82
ARHGAP17-204ENST00000570320 CADPSQ9ULU8 1353 aa9.89□□□□□ -0.83
ARHGAP17-204ENST00000570320 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
ARHGAP17-204ENST00000570320 MRC2Q9UBG0 1479 aa9.88□□□□□ -0.83
ARHGAP17-204ENST00000570320 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
ARHGAP17-204ENST00000570320 WDR62O43379 1518 aa9.86□□□□□ -0.83
ARHGAP17-204ENST00000570320 CFTRP13569 1480 aa9.85□□□□□ -0.83
ARHGAP17-204ENST00000570320 CEP164Q9UPV0 1460 aa9.82□□□□□ -0.84
ARHGAP17-204ENST00000570320 WRNQ14191 1432 aaPredicted RBP eCLIP9.79□□□□□ -0.84
ARHGAP17-204ENST00000570320 FANCD2Q9BXW9 1451 aa9.79□□□□□ -0.84
ARHGAP17-204ENST00000570320 EHMT2Q96KQ7 1210 aa9.79□□□□□ -0.84
ARHGAP17-204ENST00000570320 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
ARHGAP17-204ENST00000570320 PRDM2Q13029 1718 aa9.73□□□□□ -0.85
ARHGAP17-204ENST00000570320 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
ARHGAP17-204ENST00000570320 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
ARHGAP17-204ENST00000570320 CUX1P39880 1505 aa9.72□□□□□ -0.85
ARHGAP17-204ENST00000570320 PKNOX2Q96KN3 472 aa9.69□□□□□ -0.86
ARHGAP17-204ENST00000570320 SOGA1O94964 1423 aa9.69□□□□□ -0.86
ARHGAP17-204ENST00000570320 DIEXFQ68CQ4 756 aaKnown RBP9.68□□□□□ -0.86
ARHGAP17-204ENST00000570320 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
ARHGAP17-204ENST00000570320 SENP3Q9H4L4 574 aaPredicted RBP9.67□□□□□ -0.86
ARHGAP17-204ENST00000570320 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
ARHGAP17-204ENST00000570320 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
ARHGAP17-204ENST00000570320 TOPBP1Q92547 1522 aa9.64□□□□□ -0.87
ARHGAP17-204ENST00000570320 FGD5Q6ZNL6 1462 aa9.64□□□□□ -0.87
ARHGAP17-204ENST00000570320 TSHZ2Q9NRE2 1034 aa9.64□□□□□ -0.87
ARHGAP17-204ENST00000570320 SALL2Q9Y467 1007 aaPredicted RBP9.64□□□□□ -0.87
ARHGAP17-204ENST00000570320 BIVM-ERCC5R4GMW8 1640 aa9.64□□□□□ -0.87
ARHGAP17-204ENST00000570320 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms