RNA–Protein interactions for RNA: ENST00000570169.1

TRAF7-207, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-207ENST00000570169 NISCHQ9Y2I1 1504 aa48.68■■■■■ 5.38
TRAF7-207ENST00000570169 CCDC180Q9P1Z9 1646 aa43■■■■■ 4.47
TRAF7-207ENST00000570169 ABCC9O60706 1549 aa41.49■■■■■ 4.23
TRAF7-207ENST00000570169 ZCCHC6Q5VYS8 1495 aaKnown RBP40.67■■■■■ 4.1
TRAF7-207ENST00000570169 DCAF8L2P0C7V8 631 aa40.56■■■■■ 4.08
TRAF7-207ENST00000570169 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.05
TRAF7-207ENST00000570169 NACADO15069 1562 aa40.32■■■■■ 4.05
TRAF7-207ENST00000570169 MYO15BQ96JP2 1530 aa40.26■■■■■ 4.04
TRAF7-207ENST00000570169 RB1CC1Q8TDY2 1594 aa40.22■■■■■ 4.03
TRAF7-207ENST00000570169 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
TRAF7-207ENST00000570169 UNC13AQ9UPW8 1703 aa39.17■■■■□ 3.86
TRAF7-207ENST00000570169 PABPN1Q86U42 306 aaKnown RBP eCLIP38.9■■■■□ 3.82
TRAF7-207ENST00000570169 SHROOM4Q9ULL8 1493 aa38.88■■■■□ 3.81
TRAF7-207ENST00000570169 BICRAQ9NZM4 1560 aa38.86■■■■□ 3.81
TRAF7-207ENST00000570169 EIF4G1Q04637 1599 aaKnown RBP37.85■■■■□ 3.65
TRAF7-207ENST00000570169 CECR2Q9BXF3 1484 aa37.81■■■■□ 3.64
TRAF7-207ENST00000570169 BAZ1AQ9NRL2 1556 aaPredicted RBP37.72■■■■□ 3.63
TRAF7-207ENST00000570169 SMARCA4P51532 1647 aa37.63■■■■□ 3.61
TRAF7-207ENST00000570169 CC2D2AQ9P2K1 1620 aa37.53■■■■□ 3.6
TRAF7-207ENST00000570169 MROH2BQ7Z745 1585 aa37.51■■■■□ 3.59
TRAF7-207ENST00000570169 DNAJC5BQ9UF47 199 aa37.42■■■■□ 3.58
TRAF7-207ENST00000570169 RSF1Q96T23 1441 aaPredicted RBP37.33■■■■□ 3.57
TRAF7-207ENST00000570169 SMARCA2P51531 1590 aa37.32■■■■□ 3.56
TRAF7-207ENST00000570169 ATAD2BQ9ULI0 1458 aa37.28■■■■□ 3.56
TRAF7-207ENST00000570169 PEG3Q9GZU2 1588 aa37.24■■■■□ 3.55
TRAF7-207ENST00000570169 NCAPD3P42695 1498 aa37.18■■■■□ 3.54
TRAF7-207ENST00000570169 WIZO95785 1651 aa37.12■■■■□ 3.53
TRAF7-207ENST00000570169 BAZ1BQ9UIG0 1483 aaKnown RBP37.06■■■■□ 3.52
TRAF7-207ENST00000570169 HMGXB3Q12766 1538 aa37.05■■■■□ 3.52
TRAF7-207ENST00000570169 SUPT5HO00267 1087 aaKnown RBP36.96■■■■□ 3.51
TRAF7-207ENST00000570169 TOP2AP11388 1531 aaKnown RBP36.81■■■■□ 3.48
TRAF7-207ENST00000570169 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
TRAF7-207ENST00000570169 CADPSQ9ULU8 1353 aa36.16■■■■□ 3.38
TRAF7-207ENST00000570169 LAMC3Q9Y6N6 1575 aa36.11■■■■□ 3.37
TRAF7-207ENST00000570169 CFTRP13569 1480 aa36.05■■■■□ 3.36
TRAF7-207ENST00000570169 NESP48681 1621 aa36.04■■■■□ 3.36
TRAF7-207ENST00000570169 PDS5BQ9NTI5 1447 aa35.91■■■■□ 3.34
TRAF7-207ENST00000570169 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
TRAF7-207ENST00000570169 PRDM2Q13029 1718 aa35.79■■■■□ 3.32
TRAF7-207ENST00000570169 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
TRAF7-207ENST00000570169 CEP164Q9UPV0 1460 aa35.65■■■■□ 3.3
TRAF7-207ENST00000570169 KIF21AQ7Z4S6 1674 aa35.62■■■■□ 3.29
TRAF7-207ENST00000570169 MRC2Q9UBG0 1479 aa35.45■■■■□ 3.27
TRAF7-207ENST00000570169 THOC2Q8NI27 1593 aaKnown RBP35.34■■■■□ 3.25
TRAF7-207ENST00000570169 ABCC8Q09428 1581 aa35.34■■■■□ 3.25
TRAF7-207ENST00000570169 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
TRAF7-207ENST00000570169 WDR62O43379 1518 aa35.27■■■■□ 3.24
TRAF7-207ENST00000570169 DNMBPQ6XZF7 1577 aa35.24■■■■□ 3.23
TRAF7-207ENST00000570169 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
TRAF7-207ENST00000570169 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
TRAF7-207ENST00000570169 CUX1P39880 1505 aa35.16■■■■□ 3.22
TRAF7-207ENST00000570169 CUX2O14529 1486 aa35.14■■■■□ 3.22
TRAF7-207ENST00000570169 TOP2BQ02880 1626 aa35.04■■■■□ 3.2
TRAF7-207ENST00000570169 SYNJ1O43426 1573 aa35.03■■■■□ 3.2
TRAF7-207ENST00000570169 BIVM-ERCC5R4GMW8 1640 aa35.02■■■■□ 3.2
TRAF7-207ENST00000570169 FGD5Q6ZNL6 1462 aa34.97■■■■□ 3.19
TRAF7-207ENST00000570169 POLA1P09884 1462 aaPredicted RBP34.95■■■■□ 3.19
TRAF7-207ENST00000570169 TRIM41Q8WV44 630 aa34.92■■■■□ 3.18
TRAF7-207ENST00000570169 IFT140Q96RY7 1462 aa34.88■■■■□ 3.17
TRAF7-207ENST00000570169 SOGA1O94964 1423 aa34.88■■■■□ 3.17
TRAF7-207ENST00000570169 CHIC1Q5VXU3 224 aa34.82■■■■□ 3.16
TRAF7-207ENST00000570169 RAD54L2Q9Y4B4 1467 aa34.78■■■■□ 3.16
TRAF7-207ENST00000570169 TARBP1Q13395 1621 aaKnown RBP34.73■■■■□ 3.15
TRAF7-207ENST00000570169 ABCA10Q8WWZ4 1543 aa34.66■■■■□ 3.14
TRAF7-207ENST00000570169 ZNF608Q9ULD9 1512 aaPredicted RBP34.58■■■■□ 3.13
TRAF7-207ENST00000570169 WDR97A6NE52 1622 aa34.58■■■■□ 3.13
TRAF7-207ENST00000570169 TDRD9Q8NDG6 1382 aaKnown RBP34.57■■■■□ 3.12
TRAF7-207ENST00000570169 AQRO60306 1485 aaKnown RBP eCLIP34.51■■■■□ 3.115e-7■■■■■ 27.6
TRAF7-207ENST00000570169 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
TRAF7-207ENST00000570169 KIF27Q86VH2 1401 aa34.48■■■■□ 3.11
TRAF7-207ENST00000570169 GAPVD1Q14C86 1478 aa34.47■■■■□ 3.11
TRAF7-207ENST00000570169 ABCA5Q8WWZ7 1642 aa34.43■■■■□ 3.1
TRAF7-207ENST00000570169 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
TRAF7-207ENST00000570169 PBRM1Q86U86 1689 aa34.29■■■■□ 3.08
TRAF7-207ENST00000570169 ERICH3Q5RHP9 1530 aa34.28■■■■□ 3.08
TRAF7-207ENST00000570169 EEA1Q15075 1411 aa34.28■■■■□ 3.08
TRAF7-207ENST00000570169 RUSC2Q8N2Y8 1516 aa34.24■■■■□ 3.07
TRAF7-207ENST00000570169 MAGI1Q96QZ7 1491 aaPredicted RBP34.23■■■■□ 3.07
TRAF7-207ENST00000570169 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
TRAF7-207ENST00000570169 IGF1RP08069 1367 aa34.21■■■■□ 3.07
TRAF7-207ENST00000570169 FAM9AQ8IZU1 332 aaPredicted RBP34.14■■■■□ 3.06
TRAF7-207ENST00000570169 CSRNP3Q8WYN3 585 aa34.12■■■■□ 3.05
TRAF7-207ENST00000570169 FHAD1B1AJZ9 1412 aa34.11■■■■□ 3.05
TRAF7-207ENST00000570169 CUL7Q14999 1698 aa34.09■■■■□ 3.05
TRAF7-207ENST00000570169 FBLN2P98095 1184 aa34.09■■■■□ 3.05
TRAF7-207ENST00000570169 CHMP7Q8WUX9 453 aaPredicted RBP34.09■■■■□ 3.05
TRAF7-207ENST00000570169 SYNJ2O15056 1496 aa34.08■■■■□ 3.05
TRAF7-207ENST00000570169 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
TRAF7-207ENST00000570169 CARMIL1Q5VZK9 1371 aa34.06■■■■□ 3.04
TRAF7-207ENST00000570169 RAPGEF2Q9Y4G8 1499 aa33.92■■■■□ 3.02
TRAF7-207ENST00000570169 CHD1O14646 1710 aa33.92■■■■□ 3.02
TRAF7-207ENST00000570169 GRIN2AQ12879 1464 aa33.91■■■■□ 3.02
TRAF7-207ENST00000570169 PRXQ9BXM0 1461 aa33.9■■■■□ 3.02
TRAF7-207ENST00000570169 OSCARQ8IYS5 282 aa33.86■■■■□ 3.01
TRAF7-207ENST00000570169 KIF21BO75037 1637 aa33.79■■■■□ 3
TRAF7-207ENST00000570169 NUP160Q12769 1436 aa33.72■■■□□ 2.99
TRAF7-207ENST00000570169 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
TRAF7-207ENST00000570169 CEP170Q5SW79 1584 aa33.67■■■□□ 2.98
TRAF7-207ENST00000570169 EHMT2Q96KQ7 1210 aa33.64■■■□□ 2.98
TRAF7-207ENST00000570169 UBTFP17480 764 aaKnown RBP33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms