RNA–Protein interactions for RNA: ENST00000569817.5

SNUPN-211, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-211ENST00000569817 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
SNUPN-211ENST00000569817 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
SNUPN-211ENST00000569817 ABCC9O60706 1549 aa33.67■■■□□ 2.98
SNUPN-211ENST00000569817 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
SNUPN-211ENST00000569817 NACADO15069 1562 aa32.19■■■□□ 2.74
SNUPN-211ENST00000569817 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
SNUPN-211ENST00000569817 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.7
SNUPN-211ENST00000569817 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
SNUPN-211ENST00000569817 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.66
SNUPN-211ENST00000569817 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
SNUPN-211ENST00000569817 PABPN1Q86U42 306 aaKnown RBP eCLIP31.47■■■□□ 2.63
SNUPN-211ENST00000569817 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
SNUPN-211ENST00000569817 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
SNUPN-211ENST00000569817 SCRIBQ14160 1630 aa31.07■■■□□ 2.56
SNUPN-211ENST00000569817 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
SNUPN-211ENST00000569817 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
SNUPN-211ENST00000569817 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
SNUPN-211ENST00000569817 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
SNUPN-211ENST00000569817 NCAPD3P42695 1498 aa29.75■■■□□ 2.35
SNUPN-211ENST00000569817 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
SNUPN-211ENST00000569817 ATAD2BQ9ULI0 1458 aa29.69■■■□□ 2.34
SNUPN-211ENST00000569817 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
SNUPN-211ENST00000569817 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
SNUPN-211ENST00000569817 HMGXB3Q12766 1538 aa29.51■■■□□ 2.32
SNUPN-211ENST00000569817 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
SNUPN-211ENST00000569817 PEG3Q9GZU2 1588 aa29.48■■■□□ 2.31
SNUPN-211ENST00000569817 BAZ1BQ9UIG0 1483 aaKnown RBP29.4■■■□□ 2.3
SNUPN-211ENST00000569817 WIZO95785 1651 aa29.13■■■□□ 2.25
SNUPN-211ENST00000569817 RSF1Q96T23 1441 aaPredicted RBP29.1■■■□□ 2.25
SNUPN-211ENST00000569817 NESP48681 1621 aa29.05■■■□□ 2.24
SNUPN-211ENST00000569817 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
SNUPN-211ENST00000569817 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
SNUPN-211ENST00000569817 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
SNUPN-211ENST00000569817 CUX2O14529 1486 aa28.86■■■□□ 2.21
SNUPN-211ENST00000569817 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
SNUPN-211ENST00000569817 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
SNUPN-211ENST00000569817 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.18
SNUPN-211ENST00000569817 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
SNUPN-211ENST00000569817 CFTRP13569 1480 aa28.62■■■□□ 2.17
SNUPN-211ENST00000569817 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
SNUPN-211ENST00000569817 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
SNUPN-211ENST00000569817 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
SNUPN-211ENST00000569817 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
SNUPN-211ENST00000569817 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
SNUPN-211ENST00000569817 WDR62O43379 1518 aa28.38■■■□□ 2.13
SNUPN-211ENST00000569817 PRDM2Q13029 1718 aa28.27■■■□□ 2.12
SNUPN-211ENST00000569817 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
SNUPN-211ENST00000569817 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
SNUPN-211ENST00000569817 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
SNUPN-211ENST00000569817 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
SNUPN-211ENST00000569817 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
SNUPN-211ENST00000569817 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
SNUPN-211ENST00000569817 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
SNUPN-211ENST00000569817 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
SNUPN-211ENST00000569817 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
SNUPN-211ENST00000569817 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.02
SNUPN-211ENST00000569817 CUX1P39880 1505 aa27.67■■■□□ 2.02
SNUPN-211ENST00000569817 SOGA1O94964 1423 aa27.67■■■□□ 2.02
SNUPN-211ENST00000569817 RAD54L2Q9Y4B4 1467 aa27.63■■■□□ 2.01
SNUPN-211ENST00000569817 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.01
SNUPN-211ENST00000569817 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
SNUPN-211ENST00000569817 EIF4G3O43432 1585 aaKnown RBP27.6■■■□□ 2.01
SNUPN-211ENST00000569817 TDRD9Q8NDG6 1382 aaKnown RBP27.54■■■□□ 2
SNUPN-211ENST00000569817 WDR97A6NE52 1622 aa27.48■■□□□ 1.99
SNUPN-211ENST00000569817 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
SNUPN-211ENST00000569817 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
SNUPN-211ENST00000569817 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
SNUPN-211ENST00000569817 FBLN2P98095 1184 aa27.36■■□□□ 1.97
SNUPN-211ENST00000569817 GRIN2BQ13224 1484 aa27.35■■□□□ 1.97
SNUPN-211ENST00000569817 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
SNUPN-211ENST00000569817 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
SNUPN-211ENST00000569817 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
SNUPN-211ENST00000569817 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
SNUPN-211ENST00000569817 CHD1O14646 1710 aa27.3■■□□□ 1.96
SNUPN-211ENST00000569817 MAGI1Q96QZ7 1491 aaPredicted RBP27.3■■□□□ 1.96
SNUPN-211ENST00000569817 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
SNUPN-211ENST00000569817 TRIM41Q8WV44 630 aa27.25■■□□□ 1.95
SNUPN-211ENST00000569817 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
SNUPN-211ENST00000569817 AEBP2Q6ZN18 517 aaPredicted RBP27.21■■□□□ 1.95
SNUPN-211ENST00000569817 SYNJ2O15056 1496 aa27.2■■□□□ 1.95
SNUPN-211ENST00000569817 PBRM1Q86U86 1689 aa27.18■■□□□ 1.94
SNUPN-211ENST00000569817 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
SNUPN-211ENST00000569817 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
SNUPN-211ENST00000569817 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
SNUPN-211ENST00000569817 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
SNUPN-211ENST00000569817 CLASP1Q7Z460 1538 aa27.05■■□□□ 1.92
SNUPN-211ENST00000569817 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
SNUPN-211ENST00000569817 FHAD1B1AJZ9 1412 aa27■■□□□ 1.91
SNUPN-211ENST00000569817 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
SNUPN-211ENST00000569817 GRIN2AQ12879 1464 aa26.98■■□□□ 1.91
SNUPN-211ENST00000569817 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
SNUPN-211ENST00000569817 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
SNUPN-211ENST00000569817 NUP160Q12769 1436 aa26.9■■□□□ 1.9
SNUPN-211ENST00000569817 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
SNUPN-211ENST00000569817 IGF1RP08069 1367 aa26.85■■□□□ 1.89
SNUPN-211ENST00000569817 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
SNUPN-211ENST00000569817 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
SNUPN-211ENST00000569817 JPH4Q96JJ6 628 aa26.69■■□□□ 1.86
SNUPN-211ENST00000569817 CUL7Q14999 1698 aa26.69■■□□□ 1.86
SNUPN-211ENST00000569817 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms