RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
THUMPD1-204ENST00000569768 CCDC180Q9P1Z9 1646 aa30.44■■■□□ 2.46
THUMPD1-204ENST00000569768 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
THUMPD1-204ENST00000569768 ABCC9O60706 1549 aa28.89■■■□□ 2.22
THUMPD1-204ENST00000569768 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
THUMPD1-204ENST00000569768 MYO15BQ96JP2 1530 aa28.6■■■□□ 2.17
THUMPD1-204ENST00000569768 NACADO15069 1562 aa28.43■■■□□ 2.14
THUMPD1-204ENST00000569768 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
THUMPD1-204ENST00000569768 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
THUMPD1-204ENST00000569768 SCRIBQ14160 1630 aa27.69■■■□□ 2.02
THUMPD1-204ENST00000569768 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
THUMPD1-204ENST00000569768 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
THUMPD1-204ENST00000569768 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
THUMPD1-204ENST00000569768 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
THUMPD1-204ENST00000569768 CECR2Q9BXF3 1484 aa26.75■■□□□ 1.87
THUMPD1-204ENST00000569768 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
THUMPD1-204ENST00000569768 SMARCA4P51532 1647 aa26.64■■□□□ 1.85
THUMPD1-204ENST00000569768 MROH2BQ7Z745 1585 aa26.59■■□□□ 1.85
THUMPD1-204ENST00000569768 RSF1Q96T23 1441 aaPredicted RBP26.58■■□□□ 1.85
THUMPD1-204ENST00000569768 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
THUMPD1-204ENST00000569768 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
THUMPD1-204ENST00000569768 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
THUMPD1-204ENST00000569768 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
THUMPD1-204ENST00000569768 WIZO95785 1651 aa26.31■■□□□ 1.8
THUMPD1-204ENST00000569768 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
THUMPD1-204ENST00000569768 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
THUMPD1-204ENST00000569768 NCAPD3P42695 1498 aa26.22■■□□□ 1.79
THUMPD1-204ENST00000569768 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
THUMPD1-204ENST00000569768 TOP2AP11388 1531 aaKnown RBP26.17■■□□□ 1.78
THUMPD1-204ENST00000569768 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
THUMPD1-204ENST00000569768 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
THUMPD1-204ENST00000569768 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
THUMPD1-204ENST00000569768 CFTRP13569 1480 aa25.49■■□□□ 1.67
THUMPD1-204ENST00000569768 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
THUMPD1-204ENST00000569768 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
THUMPD1-204ENST00000569768 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
THUMPD1-204ENST00000569768 NESP48681 1621 aa25.23■■□□□ 1.63
THUMPD1-204ENST00000569768 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
THUMPD1-204ENST00000569768 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.61
THUMPD1-204ENST00000569768 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
THUMPD1-204ENST00000569768 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
THUMPD1-204ENST00000569768 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
THUMPD1-204ENST00000569768 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
THUMPD1-204ENST00000569768 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
THUMPD1-204ENST00000569768 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
THUMPD1-204ENST00000569768 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
THUMPD1-204ENST00000569768 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
THUMPD1-204ENST00000569768 CUX1P39880 1505 aa24.91■■□□□ 1.58
THUMPD1-204ENST00000569768 TRIM41Q8WV44 630 aa24.9■■□□□ 1.58
THUMPD1-204ENST00000569768 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.58
THUMPD1-204ENST00000569768 ERCC6Q03468 1493 aa24.87■■□□□ 1.57
THUMPD1-204ENST00000569768 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
THUMPD1-204ENST00000569768 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
THUMPD1-204ENST00000569768 TOPBP1Q92547 1522 aa24.83■■□□□ 1.57
THUMPD1-204ENST00000569768 WDR62O43379 1518 aa24.78■■□□□ 1.56
THUMPD1-204ENST00000569768 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
THUMPD1-204ENST00000569768 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.55
THUMPD1-204ENST00000569768 POLA1P09884 1462 aaPredicted RBP24.67■■□□□ 1.54
THUMPD1-204ENST00000569768 EEA1Q15075 1411 aa24.59■■□□□ 1.53
THUMPD1-204ENST00000569768 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
THUMPD1-204ENST00000569768 SOGA1O94964 1423 aa24.56■■□□□ 1.52
THUMPD1-204ENST00000569768 CUX2O14529 1486 aa24.53■■□□□ 1.52
THUMPD1-204ENST00000569768 IFT140Q96RY7 1462 aa24.52■■□□□ 1.52
THUMPD1-204ENST00000569768 WDR97A6NE52 1622 aa24.51■■□□□ 1.51
THUMPD1-204ENST00000569768 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
THUMPD1-204ENST00000569768 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
THUMPD1-204ENST00000569768 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
THUMPD1-204ENST00000569768 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
THUMPD1-204ENST00000569768 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.49
THUMPD1-204ENST00000569768 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
THUMPD1-204ENST00000569768 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
THUMPD1-204ENST00000569768 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
THUMPD1-204ENST00000569768 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
THUMPD1-204ENST00000569768 IGF1RP08069 1367 aa24.27■■□□□ 1.48
THUMPD1-204ENST00000569768 ZNF608Q9ULD9 1512 aaPredicted RBP24.25■■□□□ 1.47
THUMPD1-204ENST00000569768 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
THUMPD1-204ENST00000569768 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
THUMPD1-204ENST00000569768 PRXQ9BXM0 1461 aa24.23■■□□□ 1.47
THUMPD1-204ENST00000569768 KIF21BO75037 1637 aa24.23■■□□□ 1.47
THUMPD1-204ENST00000569768 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
THUMPD1-204ENST00000569768 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.475e-10■■■■□ 23.4
THUMPD1-204ENST00000569768 CUL7Q14999 1698 aa24.21■■□□□ 1.47
THUMPD1-204ENST00000569768 PBRM1Q86U86 1689 aa24.2■■□□□ 1.46
THUMPD1-204ENST00000569768 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
THUMPD1-204ENST00000569768 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
THUMPD1-204ENST00000569768 MAGI1Q96QZ7 1491 aaPredicted RBP24.11■■□□□ 1.45
THUMPD1-204ENST00000569768 RAPGEF2Q9Y4G8 1499 aa24.1■■□□□ 1.45
THUMPD1-204ENST00000569768 ADAMTS12P58397 1594 aa24.09■■□□□ 1.45
THUMPD1-204ENST00000569768 FHAD1B1AJZ9 1412 aa24.08■■□□□ 1.44
THUMPD1-204ENST00000569768 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
THUMPD1-204ENST00000569768 SYNJ2O15056 1496 aa23.98■■□□□ 1.43
THUMPD1-204ENST00000569768 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
THUMPD1-204ENST00000569768 LOC105371045A0A1W2PR82 267 aa23.96■■□□□ 1.43
THUMPD1-204ENST00000569768 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
THUMPD1-204ENST00000569768 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
THUMPD1-204ENST00000569768 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
THUMPD1-204ENST00000569768 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
THUMPD1-204ENST00000569768 NUP160Q12769 1436 aa23.8■■□□□ 1.4
THUMPD1-204ENST00000569768 EHMT2Q96KQ7 1210 aa23.77■■□□□ 1.4
THUMPD1-204ENST00000569768 CHD1O14646 1710 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms