RNA–Protein interactions for RNA: ENST00000569511.5

USP10-216, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 5

Gene USP10, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-216ENST00000569511 NISCHQ9Y2I1 1504 aa42.75■■■■■ 4.43
USP10-216ENST00000569511 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
USP10-216ENST00000569511 ABCC9O60706 1549 aa36.83■■■■□ 3.49
USP10-216ENST00000569511 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
USP10-216ENST00000569511 DCAF8L2P0C7V8 631 aa35.53■■■■□ 3.28
USP10-216ENST00000569511 NACADO15069 1562 aa35.47■■■■□ 3.27
USP10-216ENST00000569511 RB1CC1Q8TDY2 1594 aa35.43■■■■□ 3.26
USP10-216ENST00000569511 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
USP10-216ENST00000569511 MYO15BQ96JP2 1530 aa35.36■■■■□ 3.25
USP10-216ENST00000569511 UNC13AQ9UPW8 1703 aa34.83■■■■□ 3.17
USP10-216ENST00000569511 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
USP10-216ENST00000569511 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
USP10-216ENST00000569511 BICRAQ9NZM4 1560 aa34.34■■■■□ 3.09
USP10-216ENST00000569511 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.08
USP10-216ENST00000569511 SHROOM4Q9ULL8 1493 aa34.03■■■■□ 3.04
USP10-216ENST00000569511 EIF4G1Q04637 1599 aaKnown RBP33.38■■■□□ 2.93
USP10-216ENST00000569511 CECR2Q9BXF3 1484 aa33.24■■■□□ 2.91
USP10-216ENST00000569511 CC2D2AQ9P2K1 1620 aa33.23■■■□□ 2.91
USP10-216ENST00000569511 SMARCA4P51532 1647 aa33.14■■■□□ 2.9
USP10-216ENST00000569511 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
USP10-216ENST00000569511 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
USP10-216ENST00000569511 SMARCA2P51531 1590 aa32.8■■■□□ 2.84
USP10-216ENST00000569511 PEG3Q9GZU2 1588 aa32.76■■■□□ 2.84
USP10-216ENST00000569511 ATAD2BQ9ULI0 1458 aa32.76■■■□□ 2.84
USP10-216ENST00000569511 WIZO95785 1651 aa32.72■■■□□ 2.83
USP10-216ENST00000569511 RSF1Q96T23 1441 aaPredicted RBP32.69■■■□□ 2.82
USP10-216ENST00000569511 NCAPD3P42695 1498 aa32.66■■■□□ 2.82
USP10-216ENST00000569511 HMGXB3Q12766 1538 aa32.6■■■□□ 2.81
USP10-216ENST00000569511 BAZ1BQ9UIG0 1483 aaKnown RBP32.55■■■□□ 2.8
USP10-216ENST00000569511 TOP2AP11388 1531 aaKnown RBP32.32■■■□□ 2.76
USP10-216ENST00000569511 SUPT5HO00267 1087 aaKnown RBP32.22■■■□□ 2.75
USP10-216ENST00000569511 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
USP10-216ENST00000569511 LAMC3Q9Y6N6 1575 aa31.81■■■□□ 2.68
USP10-216ENST00000569511 NESP48681 1621 aa31.8■■■□□ 2.68
USP10-216ENST00000569511 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
USP10-216ENST00000569511 ERCC6Q03468 1493 aa31.75■■■□□ 2.67
USP10-216ENST00000569511 CUX2O14529 1486 aa31.73■■■□□ 2.67
USP10-216ENST00000569511 CADPSQ9ULU8 1353 aa31.73■■■□□ 2.67
USP10-216ENST00000569511 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
USP10-216ENST00000569511 CFTRP13569 1480 aa31.65■■■□□ 2.66
USP10-216ENST00000569511 KIF21AQ7Z4S6 1674 aa31.58■■■□□ 2.65
USP10-216ENST00000569511 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
USP10-216ENST00000569511 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
USP10-216ENST00000569511 CEP164Q9UPV0 1460 aa31.34■■■□□ 2.61
USP10-216ENST00000569511 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
USP10-216ENST00000569511 MRC2Q9UBG0 1479 aa31.2■■■□□ 2.58
USP10-216ENST00000569511 WDR62O43379 1518 aa31.09■■■□□ 2.57
USP10-216ENST00000569511 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
USP10-216ENST00000569511 DNMBPQ6XZF7 1577 aa31■■■□□ 2.55
USP10-216ENST00000569511 ABCC8Q09428 1581 aa30.99■■■□□ 2.55
USP10-216ENST00000569511 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
USP10-216ENST00000569511 CUX1P39880 1505 aa30.91■■■□□ 2.54
USP10-216ENST00000569511 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
USP10-216ENST00000569511 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
USP10-216ENST00000569511 SYNJ1O43426 1573 aa30.8■■■□□ 2.52
USP10-216ENST00000569511 TOP2BQ02880 1626 aa30.79■■■□□ 2.52
USP10-216ENST00000569511 POLA1P09884 1462 aaPredicted RBP30.72■■■□□ 2.51
USP10-216ENST00000569511 FGD5Q6ZNL6 1462 aa30.72■■■□□ 2.51
USP10-216ENST00000569511 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
USP10-216ENST00000569511 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
USP10-216ENST00000569511 SOGA1O94964 1423 aa30.59■■■□□ 2.49
USP10-216ENST00000569511 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
USP10-216ENST00000569511 WDR97A6NE52 1622 aa30.56■■■□□ 2.48
USP10-216ENST00000569511 ZNF608Q9ULD9 1512 aaPredicted RBP30.47■■■□□ 2.47
USP10-216ENST00000569511 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.47
USP10-216ENST00000569511 ABCA10Q8WWZ4 1543 aa30.43■■■□□ 2.46
USP10-216ENST00000569511 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
USP10-216ENST00000569511 TDRD9Q8NDG6 1382 aaKnown RBP30.35■■■□□ 2.45
USP10-216ENST00000569511 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.454e-6■■□□□ 14.3
USP10-216ENST00000569511 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
USP10-216ENST00000569511 PBRM1Q86U86 1689 aa30.33■■■□□ 2.45
USP10-216ENST00000569511 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
USP10-216ENST00000569511 GAPVD1Q14C86 1478 aa30.27■■■□□ 2.44
USP10-216ENST00000569511 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
USP10-216ENST00000569511 GRIN2BQ13224 1484 aa30.19■■■□□ 2.42
USP10-216ENST00000569511 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
USP10-216ENST00000569511 SNAPC4Q5SXM2 1469 aa30.1■■■□□ 2.41
USP10-216ENST00000569511 ERICH3Q5RHP9 1530 aa30.1■■■□□ 2.41
USP10-216ENST00000569511 CHD1O14646 1710 aa30.09■■■□□ 2.41
USP10-216ENST00000569511 MAGI1Q96QZ7 1491 aaPredicted RBP30.07■■■□□ 2.4
USP10-216ENST00000569511 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
USP10-216ENST00000569511 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
USP10-216ENST00000569511 CUL7Q14999 1698 aa29.98■■■□□ 2.39
USP10-216ENST00000569511 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
USP10-216ENST00000569511 IGF1RP08069 1367 aa29.94■■■□□ 2.38
USP10-216ENST00000569511 FHAD1B1AJZ9 1412 aa29.91■■■□□ 2.38
USP10-216ENST00000569511 FBLN2P98095 1184 aa29.91■■■□□ 2.38
USP10-216ENST00000569511 CHMP7Q8WUX9 453 aaPredicted RBP29.88■■■□□ 2.37
USP10-216ENST00000569511 RIMBP3CA6NJZ7 1639 aa29.88■■■□□ 2.37
USP10-216ENST00000569511 RIMBP3BA6NNM3 1639 aa29.88■■■□□ 2.37
USP10-216ENST00000569511 RIMBP3Q9UFD9 1639 aa29.88■■■□□ 2.37
USP10-216ENST00000569511 EEA1Q15075 1411 aa29.87■■■□□ 2.37
USP10-216ENST00000569511 ARHGEF11O15085 1522 aa29.81■■■□□ 2.36
USP10-216ENST00000569511 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
USP10-216ENST00000569511 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
USP10-216ENST00000569511 FAM9AQ8IZU1 332 aaPredicted RBP29.78■■■□□ 2.36
USP10-216ENST00000569511 CSRNP3Q8WYN3 585 aa29.74■■■□□ 2.35
USP10-216ENST00000569511 RAPGEF2Q9Y4G8 1499 aa29.69■■■□□ 2.34
USP10-216ENST00000569511 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
USP10-216ENST00000569511 PRXQ9BXM0 1461 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms