RNA–Protein interactions for RNA: ENST00000568996.1

RSRP1-220, Transcript of arginine and serine rich protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene RSRP1, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-220ENST00000568996 NISCHQ9Y2I1 1504 aa38.01■■■■□ 3.67
RSRP1-220ENST00000568996 ABCC9O60706 1549 aa34.81■■■■□ 3.16
RSRP1-220ENST00000568996 CCDC180Q9P1Z9 1646 aa34.43■■■■□ 3.1
RSRP1-220ENST00000568996 DNAJC5BQ9UF47 199 aa33.03■■■□□ 2.88
RSRP1-220ENST00000568996 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
RSRP1-220ENST00000568996 NACADO15069 1562 aa32.67■■■□□ 2.82
RSRP1-220ENST00000568996 PABPN1Q86U42 306 aaKnown RBP eCLIP32.28■■■□□ 2.76
RSRP1-220ENST00000568996 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
RSRP1-220ENST00000568996 UNC13AQ9UPW8 1703 aa32.2■■■□□ 2.74
RSRP1-220ENST00000568996 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
RSRP1-220ENST00000568996 BICRAQ9NZM4 1560 aa31.96■■■□□ 2.71
RSRP1-220ENST00000568996 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
RSRP1-220ENST00000568996 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
RSRP1-220ENST00000568996 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
RSRP1-220ENST00000568996 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
RSRP1-220ENST00000568996 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
RSRP1-220ENST00000568996 EIF4G1Q04637 1599 aaKnown RBP31.27■■■□□ 2.6
RSRP1-220ENST00000568996 SCRIBQ14160 1630 aa31.22■■■□□ 2.59
RSRP1-220ENST00000568996 DNAJC5Q9H3Z4 198 aa30.86■■■□□ 2.53
RSRP1-220ENST00000568996 CUX2O14529 1486 aa30.36■■■□□ 2.45
RSRP1-220ENST00000568996 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
RSRP1-220ENST00000568996 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
RSRP1-220ENST00000568996 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
RSRP1-220ENST00000568996 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
RSRP1-220ENST00000568996 HMGXB3Q12766 1538 aa29.89■■■□□ 2.38
RSRP1-220ENST00000568996 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
RSRP1-220ENST00000568996 NESP48681 1621 aa29.71■■■□□ 2.35
RSRP1-220ENST00000568996 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
RSRP1-220ENST00000568996 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
RSRP1-220ENST00000568996 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
RSRP1-220ENST00000568996 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
RSRP1-220ENST00000568996 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
RSRP1-220ENST00000568996 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
RSRP1-220ENST00000568996 KIF21AQ7Z4S6 1674 aa29.38■■■□□ 2.29
RSRP1-220ENST00000568996 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
RSRP1-220ENST00000568996 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
RSRP1-220ENST00000568996 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
RSRP1-220ENST00000568996 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
RSRP1-220ENST00000568996 WDR62O43379 1518 aa29.1■■■□□ 2.25
RSRP1-220ENST00000568996 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
RSRP1-220ENST00000568996 WIZO95785 1651 aa28.86■■■□□ 2.21
RSRP1-220ENST00000568996 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
RSRP1-220ENST00000568996 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
RSRP1-220ENST00000568996 CFTRP13569 1480 aa28.73■■■□□ 2.19
RSRP1-220ENST00000568996 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
RSRP1-220ENST00000568996 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
RSRP1-220ENST00000568996 RIMBP3CA6NJZ7 1639 aa28.48■■■□□ 2.15
RSRP1-220ENST00000568996 RIMBP3BA6NNM3 1639 aa28.48■■■□□ 2.15
RSRP1-220ENST00000568996 RIMBP3Q9UFD9 1639 aa28.48■■■□□ 2.15
RSRP1-220ENST00000568996 PRDM2Q13029 1718 aa28.47■■■□□ 2.15
RSRP1-220ENST00000568996 RSF1Q96T23 1441 aaPredicted RBP28.43■■■□□ 2.14
RSRP1-220ENST00000568996 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
RSRP1-220ENST00000568996 ARHGEF11O15085 1522 aa28.34■■■□□ 2.13
RSRP1-220ENST00000568996 ZNF608Q9ULD9 1512 aaPredicted RBP28.29■■■□□ 2.12
RSRP1-220ENST00000568996 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
RSRP1-220ENST00000568996 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
RSRP1-220ENST00000568996 EIF4G3O43432 1585 aaKnown RBP28.18■■■□□ 2.1
RSRP1-220ENST00000568996 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
RSRP1-220ENST00000568996 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
RSRP1-220ENST00000568996 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
RSRP1-220ENST00000568996 CHD1O14646 1710 aa28.07■■■□□ 2.08
RSRP1-220ENST00000568996 TRHP20396 242 aaPredicted RBP28.04■■■□□ 2.08
RSRP1-220ENST00000568996 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
RSRP1-220ENST00000568996 ARAP1Q96P48 1450 aa28■■■□□ 2.07
RSRP1-220ENST00000568996 AQRO60306 1485 aaKnown RBP eCLIP27.99■■■□□ 2.074e-7■■■■□ 20.6
RSRP1-220ENST00000568996 FBLN2P98095 1184 aa27.95■■■□□ 2.06
RSRP1-220ENST00000568996 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.05
RSRP1-220ENST00000568996 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
RSRP1-220ENST00000568996 SOGA1O94964 1423 aa27.77■■■□□ 2.04
RSRP1-220ENST00000568996 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
RSRP1-220ENST00000568996 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
RSRP1-220ENST00000568996 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
RSRP1-220ENST00000568996 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
RSRP1-220ENST00000568996 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
RSRP1-220ENST00000568996 CHMP7Q8WUX9 453 aaPredicted RBP27.71■■■□□ 2.03
RSRP1-220ENST00000568996 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
RSRP1-220ENST00000568996 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
RSRP1-220ENST00000568996 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
RSRP1-220ENST00000568996 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
RSRP1-220ENST00000568996 SYNJ2O15056 1496 aa27.59■■■□□ 2.01
RSRP1-220ENST00000568996 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
RSRP1-220ENST00000568996 CUX1P39880 1505 aa27.5■■□□□ 1.99
RSRP1-220ENST00000568996 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
RSRP1-220ENST00000568996 PBRM1Q86U86 1689 aa27.47■■□□□ 1.99
RSRP1-220ENST00000568996 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
RSRP1-220ENST00000568996 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
RSRP1-220ENST00000568996 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
RSRP1-220ENST00000568996 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
RSRP1-220ENST00000568996 NUP160Q12769 1436 aa27.17■■□□□ 1.94
RSRP1-220ENST00000568996 ERCC6L2Q5T890 1561 aa27.17■■□□□ 1.94
RSRP1-220ENST00000568996 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
RSRP1-220ENST00000568996 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.93
RSRP1-220ENST00000568996 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
RSRP1-220ENST00000568996 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
RSRP1-220ENST00000568996 KIF13AQ9H1H9 1805 aa27.04■■□□□ 1.92
RSRP1-220ENST00000568996 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.91
RSRP1-220ENST00000568996 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
RSRP1-220ENST00000568996 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
RSRP1-220ENST00000568996 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
RSRP1-220ENST00000568996 NPM1P06748 294 aaKnown RBP eCLIP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms