RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 NISCHQ9Y2I1 1504 aa46.31■■■■■ 5
CPNE7-209ENST00000568977 CCDC180Q9P1Z9 1646 aa41.5■■■■■ 4.23
CPNE7-209ENST00000568977 ABCC9O60706 1549 aa41.11■■■■■ 4.17
CPNE7-209ENST00000568977 RB1CC1Q8TDY2 1594 aa39.29■■■■□ 3.88
CPNE7-209ENST00000568977 NACADO15069 1562 aa39.1■■■■□ 3.85
CPNE7-209ENST00000568977 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
CPNE7-209ENST00000568977 MYO15BQ96JP2 1530 aa38.67■■■■□ 3.78
CPNE7-209ENST00000568977 ZCCHC6Q5VYS8 1495 aaKnown RBP38.49■■■■□ 3.75
CPNE7-209ENST00000568977 UNC13AQ9UPW8 1703 aa38.47■■■■□ 3.75
CPNE7-209ENST00000568977 DCAF1Q9Y4B6 1507 aa38.29■■■■□ 3.72
CPNE7-209ENST00000568977 PABPN1Q86U42 306 aaKnown RBP eCLIP38.25■■■■□ 3.71
CPNE7-209ENST00000568977 DNAJC5BQ9UF47 199 aa38.19■■■■□ 3.7
CPNE7-209ENST00000568977 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
CPNE7-209ENST00000568977 SCRIBQ14160 1630 aa37.8■■■■□ 3.64
CPNE7-209ENST00000568977 SHROOM4Q9ULL8 1493 aa37.69■■■■□ 3.62
CPNE7-209ENST00000568977 EIF4G1Q04637 1599 aaKnown RBP37.19■■■■□ 3.54
CPNE7-209ENST00000568977 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
CPNE7-209ENST00000568977 CECR2Q9BXF3 1484 aa37■■■■□ 3.51
CPNE7-209ENST00000568977 SMARCA4P51532 1647 aa36.1■■■■□ 3.37
CPNE7-209ENST00000568977 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
CPNE7-209ENST00000568977 ATAD2BQ9ULI0 1458 aa36■■■■□ 3.35
CPNE7-209ENST00000568977 SMARCA2P51531 1590 aa35.95■■■■□ 3.35
CPNE7-209ENST00000568977 BAZ1AQ9NRL2 1556 aaPredicted RBP35.94■■■■□ 3.34
CPNE7-209ENST00000568977 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
CPNE7-209ENST00000568977 PEG3Q9GZU2 1588 aa35.74■■■■□ 3.31
CPNE7-209ENST00000568977 BAZ1BQ9UIG0 1483 aaKnown RBP35.69■■■■□ 3.3
CPNE7-209ENST00000568977 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
CPNE7-209ENST00000568977 ERCC6Q03468 1493 aa35.48■■■■□ 3.27
CPNE7-209ENST00000568977 NESP48681 1621 aa35.4■■■■□ 3.26
CPNE7-209ENST00000568977 CUX2O14529 1486 aa35.32■■■■□ 3.24
CPNE7-209ENST00000568977 WIZO95785 1651 aa35.29■■■■□ 3.24
CPNE7-209ENST00000568977 LAMC3Q9Y6N6 1575 aa35.25■■■■□ 3.23
CPNE7-209ENST00000568977 THOC2Q8NI27 1593 aaKnown RBP35.05■■■■□ 3.2
CPNE7-209ENST00000568977 RSF1Q96T23 1441 aaPredicted RBP35.04■■■■□ 3.2
CPNE7-209ENST00000568977 KIF21AQ7Z4S6 1674 aa35.03■■■■□ 3.2
CPNE7-209ENST00000568977 PDS5BQ9NTI5 1447 aa34.98■■■■□ 3.19
CPNE7-209ENST00000568977 CADPSQ9ULU8 1353 aa34.95■■■■□ 3.19
CPNE7-209ENST00000568977 TOP2AP11388 1531 aaKnown RBP34.89■■■■□ 3.18
CPNE7-209ENST00000568977 DNAJC5Q9H3Z4 198 aa34.84■■■■□ 3.17
CPNE7-209ENST00000568977 MRC2Q9UBG0 1479 aa34.7■■■■□ 3.15
CPNE7-209ENST00000568977 CFTRP13569 1480 aa34.65■■■■□ 3.14
CPNE7-209ENST00000568977 WDR62O43379 1518 aa34.63■■■■□ 3.13
CPNE7-209ENST00000568977 CEP164Q9UPV0 1460 aa34.63■■■■□ 3.13
CPNE7-209ENST00000568977 FANCD2Q9BXW9 1451 aa34.59■■■■□ 3.13
CPNE7-209ENST00000568977 PRDM2Q13029 1718 aa34.45■■■■□ 3.11
CPNE7-209ENST00000568977 CCDC88BA6NC98 1476 aa34.42■■■■□ 3.1
CPNE7-209ENST00000568977 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
CPNE7-209ENST00000568977 TOPBP1Q92547 1522 aa33.99■■■■□ 3.03
CPNE7-209ENST00000568977 DNMBPQ6XZF7 1577 aa33.92■■■■□ 3.02
CPNE7-209ENST00000568977 ABCC8Q09428 1581 aa33.91■■■■□ 3.02
CPNE7-209ENST00000568977 IFT140Q96RY7 1462 aa33.9■■■■□ 3.02
CPNE7-209ENST00000568977 ZNF608Q9ULD9 1512 aaPredicted RBP33.82■■■■□ 3
CPNE7-209ENST00000568977 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
CPNE7-209ENST00000568977 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
CPNE7-209ENST00000568977 POLA1P09884 1462 aaPredicted RBP33.67■■■□□ 2.98
CPNE7-209ENST00000568977 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
CPNE7-209ENST00000568977 OSCARQ8IYS5 282 aa33.65■■■□□ 2.98
CPNE7-209ENST00000568977 CUX1P39880 1505 aa33.53■■■□□ 2.96
CPNE7-209ENST00000568977 AQRO60306 1485 aaKnown RBP eCLIP33.51■■■□□ 2.962e-7■■■□□ 17.9
CPNE7-209ENST00000568977 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
CPNE7-209ENST00000568977 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
CPNE7-209ENST00000568977 SOGA1O94964 1423 aa33.45■■■□□ 2.95
CPNE7-209ENST00000568977 TRIM41Q8WV44 630 aa33.45■■■□□ 2.95
CPNE7-209ENST00000568977 CHD1O14646 1710 aa33.41■■■□□ 2.94
CPNE7-209ENST00000568977 WDR97A6NE52 1622 aa33.39■■■□□ 2.93
CPNE7-209ENST00000568977 TDRD9Q8NDG6 1382 aaKnown RBP33.35■■■□□ 2.93
CPNE7-209ENST00000568977 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
CPNE7-209ENST00000568977 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
CPNE7-209ENST00000568977 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
CPNE7-209ENST00000568977 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
CPNE7-209ENST00000568977 ARHGEF11O15085 1522 aa33.23■■■□□ 2.91
CPNE7-209ENST00000568977 FBLN2P98095 1184 aa33.19■■■□□ 2.9
CPNE7-209ENST00000568977 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
CPNE7-209ENST00000568977 MAGI1Q96QZ7 1491 aaPredicted RBP33.17■■■□□ 2.9
CPNE7-209ENST00000568977 PBRM1Q86U86 1689 aa33.14■■■□□ 2.9
CPNE7-209ENST00000568977 ABCA10Q8WWZ4 1543 aa33.13■■■□□ 2.89
CPNE7-209ENST00000568977 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
CPNE7-209ENST00000568977 ABCA5Q8WWZ7 1642 aa33.1■■■□□ 2.89
CPNE7-209ENST00000568977 GAPVD1Q14C86 1478 aa33.1■■■□□ 2.89
CPNE7-209ENST00000568977 TOP2BQ02880 1626 aa33.09■■■□□ 2.89
CPNE7-209ENST00000568977 WRNQ14191 1432 aaPredicted RBP eCLIP33.07■■■□□ 2.88
CPNE7-209ENST00000568977 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
CPNE7-209ENST00000568977 SYNJ2O15056 1496 aa33.04■■■□□ 2.88
CPNE7-209ENST00000568977 CLASP1Q7Z460 1538 aa33.01■■■□□ 2.87
CPNE7-209ENST00000568977 CHMP7Q8WUX9 453 aaPredicted RBP33■■■□□ 2.87
CPNE7-209ENST00000568977 ARAP1Q96P48 1450 aa32.93■■■□□ 2.86
CPNE7-209ENST00000568977 CYB5RLQ6IPT4 315 aa32.85■■■□□ 2.85
CPNE7-209ENST00000568977 ADAMTS12P58397 1594 aa32.84■■■□□ 2.85
CPNE7-209ENST00000568977 GRIN2AQ12879 1464 aa32.77■■■□□ 2.84
CPNE7-209ENST00000568977 ERICH3Q5RHP9 1530 aa32.73■■■□□ 2.83
CPNE7-209ENST00000568977 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
CPNE7-209ENST00000568977 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
CPNE7-209ENST00000568977 NUP160Q12769 1436 aa32.64■■■□□ 2.82
CPNE7-209ENST00000568977 SHROOM2Q13796 1616 aa32.5■■■□□ 2.79
CPNE7-209ENST00000568977 ERCC6L2Q5T890 1561 aa32.49■■■□□ 2.79
CPNE7-209ENST00000568977 KIF27Q86VH2 1401 aa32.41■■■□□ 2.78
CPNE7-209ENST00000568977 TRHP20396 242 aaPredicted RBP32.39■■■□□ 2.78
CPNE7-209ENST00000568977 RUSC2Q8N2Y8 1516 aa32.38■■■□□ 2.77
CPNE7-209ENST00000568977 CUL7Q14999 1698 aa32.36■■■□□ 2.77
CPNE7-209ENST00000568977 IGF1RP08069 1367 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms