RNA–Protein interactions for RNA: ENST00000568880.2

HIRIP3-207, Transcript of HIRA interacting protein 3, humanhuman

TSL 2

Gene HIRIP3, Length 738 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3-207ENST00000568880 NISCHQ9Y2I1 1504 aa60.3■■■■■ 7.24
HIRIP3-207ENST00000568880 CCDC180Q9P1Z9 1646 aa53.89■■■■■ 6.22
HIRIP3-207ENST00000568880 ABCC9O60706 1549 aa53.27■■■■■ 6.12
HIRIP3-207ENST00000568880 RB1CC1Q8TDY2 1594 aa50.94■■■■■ 5.75
HIRIP3-207ENST00000568880 NACADO15069 1562 aa50.74■■■■■ 5.71
HIRIP3-207ENST00000568880 DCAF8L2P0C7V8 631 aa50.46■■■■■ 5.67
HIRIP3-207ENST00000568880 MYO15BQ96JP2 1530 aa50.26■■■■■ 5.64
HIRIP3-207ENST00000568880 ZCCHC6Q5VYS8 1495 aaKnown RBP50.12■■■■■ 5.61
HIRIP3-207ENST00000568880 UNC13AQ9UPW8 1703 aa49.99■■■■■ 5.59
HIRIP3-207ENST00000568880 DCAF1Q9Y4B6 1507 aa49.84■■■■■ 5.57
HIRIP3-207ENST00000568880 PABPN1Q86U42 306 aaKnown RBP eCLIP49.64■■■■■ 5.54
HIRIP3-207ENST00000568880 BICRAQ9NZM4 1560 aa49.57■■■■■ 5.53
HIRIP3-207ENST00000568880 DNAJC5BQ9UF47 199 aa49.5■■■■■ 5.51
HIRIP3-207ENST00000568880 SCRIBQ14160 1630 aa49.13■■■■■ 5.46
HIRIP3-207ENST00000568880 SHROOM4Q9ULL8 1493 aa48.82■■■■■ 5.41
HIRIP3-207ENST00000568880 EIF4G1Q04637 1599 aaKnown RBP48.23■■■■■ 5.31
HIRIP3-207ENST00000568880 CC2D2AQ9P2K1 1620 aa48.19■■■■■ 5.31
HIRIP3-207ENST00000568880 CECR2Q9BXF3 1484 aa47.9■■■■■ 5.26
HIRIP3-207ENST00000568880 SMARCA4P51532 1647 aa46.94■■■■■ 5.11
HIRIP3-207ENST00000568880 NCAPD3P42695 1498 aa46.84■■■■■ 5.09
HIRIP3-207ENST00000568880 ATAD2BQ9ULI0 1458 aa46.8■■■■■ 5.08
HIRIP3-207ENST00000568880 BAZ1AQ9NRL2 1556 aaPredicted RBP46.73■■■■■ 5.07
HIRIP3-207ENST00000568880 SMARCA2P51531 1590 aa46.67■■■■■ 5.06
HIRIP3-207ENST00000568880 HMGXB3Q12766 1538 aa46.58■■■■■ 5.05
HIRIP3-207ENST00000568880 MROH2BQ7Z745 1585 aa46.51■■■■■ 5.04
HIRIP3-207ENST00000568880 PEG3Q9GZU2 1588 aa46.49■■■■■ 5.03
HIRIP3-207ENST00000568880 BAZ1BQ9UIG0 1483 aaKnown RBP46.34■■■■■ 5.01
HIRIP3-207ENST00000568880 WIZO95785 1651 aa46■■■■■ 4.95
HIRIP3-207ENST00000568880 NESP48681 1621 aa45.98■■■■■ 4.95
HIRIP3-207ENST00000568880 ERCC6Q03468 1493 aa45.87■■■■■ 4.93
HIRIP3-207ENST00000568880 RSF1Q96T23 1441 aaPredicted RBP45.72■■■■■ 4.91
HIRIP3-207ENST00000568880 LAMC3Q9Y6N6 1575 aa45.71■■■■■ 4.91
HIRIP3-207ENST00000568880 CUX2O14529 1486 aa45.63■■■■■ 4.9
HIRIP3-207ENST00000568880 KIF21AQ7Z4S6 1674 aa45.46■■■■■ 4.87
HIRIP3-207ENST00000568880 THOC2Q8NI27 1593 aaKnown RBP45.43■■■■■ 4.86
HIRIP3-207ENST00000568880 CADPSQ9ULU8 1353 aa45.41■■■■■ 4.86
HIRIP3-207ENST00000568880 TOP2AP11388 1531 aaKnown RBP45.41■■■■■ 4.86
HIRIP3-207ENST00000568880 PDS5BQ9NTI5 1447 aa45.33■■■■■ 4.85
HIRIP3-207ENST00000568880 CFTRP13569 1480 aa45.06■■■■■ 4.8
HIRIP3-207ENST00000568880 MRC2Q9UBG0 1479 aa44.98■■■■■ 4.79
HIRIP3-207ENST00000568880 DNAJC5Q9H3Z4 198 aa44.93■■■■■ 4.78
HIRIP3-207ENST00000568880 FANCD2Q9BXW9 1451 aa44.91■■■■■ 4.78
HIRIP3-207ENST00000568880 CEP164Q9UPV0 1460 aa44.9■■■■■ 4.78
HIRIP3-207ENST00000568880 WDR62O43379 1518 aa44.89■■■■■ 4.78
HIRIP3-207ENST00000568880 CCDC88BA6NC98 1476 aa44.88■■■■■ 4.78
HIRIP3-207ENST00000568880 PRDM2Q13029 1718 aa44.77■■■■■ 4.76
HIRIP3-207ENST00000568880 URB2Q14146 1524 aaKnown RBP44.58■■■■■ 4.73
HIRIP3-207ENST00000568880 TOPBP1Q92547 1522 aa44.17■■■■■ 4.66
HIRIP3-207ENST00000568880 DNMBPQ6XZF7 1577 aa44.06■■■■■ 4.64
HIRIP3-207ENST00000568880 ABCC8Q09428 1581 aa44.02■■■■■ 4.64
HIRIP3-207ENST00000568880 SUPT5HO00267 1087 aaKnown RBP44.01■■■■■ 4.64
HIRIP3-207ENST00000568880 IFT140Q96RY7 1462 aa43.97■■■■■ 4.63
HIRIP3-207ENST00000568880 ZNF608Q9ULD9 1512 aaPredicted RBP43.93■■■■■ 4.62
HIRIP3-207ENST00000568880 TARBP1Q13395 1621 aaKnown RBP43.79■■■■■ 4.6
HIRIP3-207ENST00000568880 POLA1P09884 1462 aaPredicted RBP43.76■■■■■ 4.6
HIRIP3-207ENST00000568880 EIF4G3O43432 1585 aaKnown RBP43.72■■■■■ 4.59
HIRIP3-207ENST00000568880 CUX1P39880 1505 aa43.66■■■■■ 4.58
HIRIP3-207ENST00000568880 RAD54L2Q9Y4B4 1467 aa43.59■■■■■ 4.57
HIRIP3-207ENST00000568880 OSCARQ8IYS5 282 aa43.57■■■■■ 4.57
HIRIP3-207ENST00000568880 AQRO60306 1485 aaKnown RBP eCLIP43.56■■■■■ 4.569e-10■■■■□ 21
HIRIP3-207ENST00000568880 FGD5Q6ZNL6 1462 aa43.56■■■■■ 4.56
HIRIP3-207ENST00000568880 SOGA1O94964 1423 aa43.5■■■■■ 4.55
HIRIP3-207ENST00000568880 TDRD9Q8NDG6 1382 aaKnown RBP43.37■■■■■ 4.53
HIRIP3-207ENST00000568880 CHD1O14646 1710 aa43.33■■■■■ 4.53
HIRIP3-207ENST00000568880 WDR97A6NE52 1622 aa43.33■■■■■ 4.53
HIRIP3-207ENST00000568880 TRIM41Q8WV44 630 aa43.15■■■■■ 4.5
HIRIP3-207ENST00000568880 BIVM-ERCC5R4GMW8 1640 aa43.14■■■■■ 4.5
HIRIP3-207ENST00000568880 SNAPC4Q5SXM2 1469 aa43.13■■■■■ 4.5
HIRIP3-207ENST00000568880 SYNJ1O43426 1573 aa43.11■■■■■ 4.49
HIRIP3-207ENST00000568880 RIMBP3CA6NJZ7 1639 aa43.1■■■■■ 4.49
HIRIP3-207ENST00000568880 RIMBP3BA6NNM3 1639 aa43.1■■■■■ 4.49
HIRIP3-207ENST00000568880 TOP2BQ02880 1626 aa43.1■■■■■ 4.49
HIRIP3-207ENST00000568880 RIMBP3Q9UFD9 1639 aa43.1■■■■■ 4.49
HIRIP3-207ENST00000568880 ABCA10Q8WWZ4 1543 aa43.09■■■■■ 4.49
HIRIP3-207ENST00000568880 GRIN2BQ13224 1484 aa43.06■■■■■ 4.48
HIRIP3-207ENST00000568880 WRNQ14191 1432 aaPredicted RBP eCLIP43.06■■■■■ 4.48
HIRIP3-207ENST00000568880 PBRM1Q86U86 1689 aa43.06■■■■■ 4.48
HIRIP3-207ENST00000568880 ABCA5Q8WWZ7 1642 aa43.04■■■■■ 4.48
HIRIP3-207ENST00000568880 FBLN2P98095 1184 aa43.03■■■■■ 4.48
HIRIP3-207ENST00000568880 MAGI1Q96QZ7 1491 aaPredicted RBP43.02■■■■■ 4.48
HIRIP3-207ENST00000568880 GAPVD1Q14C86 1478 aa43■■■■■ 4.47
HIRIP3-207ENST00000568880 ARHGEF11O15085 1522 aa42.99■■■■■ 4.47
HIRIP3-207ENST00000568880 SYNJ2O15056 1496 aa42.87■■■■■ 4.45
HIRIP3-207ENST00000568880 CLASP1Q7Z460 1538 aa42.81■■■■■ 4.44
HIRIP3-207ENST00000568880 CHMP7Q8WUX9 453 aaPredicted RBP42.81■■■■■ 4.44
HIRIP3-207ENST00000568880 ADAMTS12P58397 1594 aa42.65■■■■■ 4.42
HIRIP3-207ENST00000568880 ARAP1Q96P48 1450 aa42.63■■■■■ 4.42
HIRIP3-207ENST00000568880 ERICH3Q5RHP9 1530 aa42.55■■■■■ 4.4
HIRIP3-207ENST00000568880 GRIN2AQ12879 1464 aa42.55■■■■■ 4.4
HIRIP3-207ENST00000568880 CYB5RLQ6IPT4 315 aa42.53■■■■■ 4.4
HIRIP3-207ENST00000568880 FHAD1B1AJZ9 1412 aa42.46■■■■■ 4.39
HIRIP3-207ENST00000568880 CEP170Q5SW79 1584 aa42.43■■■■■ 4.38
HIRIP3-207ENST00000568880 NUP160Q12769 1436 aa42.4■■■■■ 4.38
HIRIP3-207ENST00000568880 ERCC6L2Q5T890 1561 aa42.23■■■■■ 4.35
HIRIP3-207ENST00000568880 SHROOM2Q13796 1616 aa42.2■■■■■ 4.35
HIRIP3-207ENST00000568880 KIF27Q86VH2 1401 aa42.17■■■■■ 4.34
HIRIP3-207ENST00000568880 IGF1RP08069 1367 aa42.14■■■■■ 4.34
HIRIP3-207ENST00000568880 CUL7Q14999 1698 aa42.06■■■■■ 4.32
HIRIP3-207ENST00000568880 RUSC2Q8N2Y8 1516 aa42.05■■■■■ 4.32
HIRIP3-207ENST00000568880 PRG4Q92954 1404 aaPredicted RBP41.89■■■■■ 4.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms