RNA–Protein interactions for RNA: ENST00000568859.5

SNAP23-221, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-221ENST00000568859 NISCHQ9Y2I1 1504 aa40.18■■■■■ 4.02
SNAP23-221ENST00000568859 ABCC9O60706 1549 aa37.12■■■■□ 3.53
SNAP23-221ENST00000568859 CCDC180Q9P1Z9 1646 aa36.4■■■■□ 3.42
SNAP23-221ENST00000568859 DNAJC5BQ9UF47 199 aa35.42■■■■□ 3.26
SNAP23-221ENST00000568859 RB1CC1Q8TDY2 1594 aa35.06■■■■□ 3.2
SNAP23-221ENST00000568859 NACADO15069 1562 aa34.63■■■■□ 3.13
SNAP23-221ENST00000568859 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
SNAP23-221ENST00000568859 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
SNAP23-221ENST00000568859 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
SNAP23-221ENST00000568859 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
SNAP23-221ENST00000568859 MYO15BQ96JP2 1530 aa33.91■■■■□ 3.02
SNAP23-221ENST00000568859 SHROOM4Q9ULL8 1493 aa33.57■■■□□ 2.97
SNAP23-221ENST00000568859 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
SNAP23-221ENST00000568859 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
SNAP23-221ENST00000568859 EIF4G1Q04637 1599 aaKnown RBP33.23■■■□□ 2.91
SNAP23-221ENST00000568859 DNAJC5Q9H3Z4 198 aa33.2■■■□□ 2.91
SNAP23-221ENST00000568859 DCAF1Q9Y4B6 1507 aa33.18■■■□□ 2.9
SNAP23-221ENST00000568859 ZCCHC6Q5VYS8 1495 aaKnown RBP33.13■■■□□ 2.89
SNAP23-221ENST00000568859 SCRIBQ14160 1630 aa33.09■■■□□ 2.89
SNAP23-221ENST00000568859 CUX2O14529 1486 aa32.38■■■□□ 2.77
SNAP23-221ENST00000568859 ERCC6Q03468 1493 aa32.2■■■□□ 2.75
SNAP23-221ENST00000568859 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
SNAP23-221ENST00000568859 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
SNAP23-221ENST00000568859 SMARCA2P51531 1590 aa31.66■■■□□ 2.66
SNAP23-221ENST00000568859 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
SNAP23-221ENST00000568859 NESP48681 1621 aa31.62■■■□□ 2.65
SNAP23-221ENST00000568859 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
SNAP23-221ENST00000568859 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
SNAP23-221ENST00000568859 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
SNAP23-221ENST00000568859 BAZ1BQ9UIG0 1483 aaKnown RBP31.43■■■□□ 2.62
SNAP23-221ENST00000568859 LAMC3Q9Y6N6 1575 aa31.38■■■□□ 2.61
SNAP23-221ENST00000568859 BAZ1AQ9NRL2 1556 aaPredicted RBP31.29■■■□□ 2.6
SNAP23-221ENST00000568859 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
SNAP23-221ENST00000568859 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
SNAP23-221ENST00000568859 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
SNAP23-221ENST00000568859 MRC2Q9UBG0 1479 aa31■■■□□ 2.55
SNAP23-221ENST00000568859 CADPSQ9ULU8 1353 aa30.98■■■□□ 2.55
SNAP23-221ENST00000568859 WDR62O43379 1518 aa30.91■■■□□ 2.54
SNAP23-221ENST00000568859 MROH2BQ7Z745 1585 aa30.91■■■□□ 2.54
SNAP23-221ENST00000568859 OSCARQ8IYS5 282 aa30.81■■■□□ 2.52
SNAP23-221ENST00000568859 CEP164Q9UPV0 1460 aa30.74■■■□□ 2.51
SNAP23-221ENST00000568859 FANCD2Q9BXW9 1451 aa30.62■■■□□ 2.49
SNAP23-221ENST00000568859 WIZO95785 1651 aa30.49■■■□□ 2.47
SNAP23-221ENST00000568859 CFTRP13569 1480 aa30.44■■■□□ 2.46
SNAP23-221ENST00000568859 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
SNAP23-221ENST00000568859 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
SNAP23-221ENST00000568859 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
SNAP23-221ENST00000568859 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
SNAP23-221ENST00000568859 ARHGEF11O15085 1522 aa30.23■■■□□ 2.43
SNAP23-221ENST00000568859 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
SNAP23-221ENST00000568859 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
SNAP23-221ENST00000568859 CYB5RLQ6IPT4 315 aa30.11■■■□□ 2.41
SNAP23-221ENST00000568859 ZNF608Q9ULD9 1512 aaPredicted RBP30.09■■■□□ 2.41
SNAP23-221ENST00000568859 TRHP20396 242 aaPredicted RBP30.08■■■□□ 2.41
SNAP23-221ENST00000568859 RSF1Q96T23 1441 aaPredicted RBP30.03■■■□□ 2.4
SNAP23-221ENST00000568859 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
SNAP23-221ENST00000568859 TOPBP1Q92547 1522 aa29.92■■■□□ 2.38
SNAP23-221ENST00000568859 ABCC8Q09428 1581 aa29.91■■■□□ 2.38
SNAP23-221ENST00000568859 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
SNAP23-221ENST00000568859 ARAP1Q96P48 1450 aa29.86■■■□□ 2.37
SNAP23-221ENST00000568859 FBLN2P98095 1184 aa29.82■■■□□ 2.36
SNAP23-221ENST00000568859 AEBP2Q6ZN18 517 aaPredicted RBP29.82■■■□□ 2.36
SNAP23-221ENST00000568859 CHD1O14646 1710 aa29.79■■■□□ 2.36
SNAP23-221ENST00000568859 CCDC88BA6NC98 1476 aa29.77■■■□□ 2.36
SNAP23-221ENST00000568859 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.35
SNAP23-221ENST00000568859 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
SNAP23-221ENST00000568859 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
SNAP23-221ENST00000568859 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
SNAP23-221ENST00000568859 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
SNAP23-221ENST00000568859 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
SNAP23-221ENST00000568859 SOGA1O94964 1423 aa29.47■■■□□ 2.31
SNAP23-221ENST00000568859 SYNJ1O43426 1573 aa29.47■■■□□ 2.31
SNAP23-221ENST00000568859 CLASP1Q7Z460 1538 aa29.46■■■□□ 2.31
SNAP23-221ENST00000568859 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.31
SNAP23-221ENST00000568859 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.31
SNAP23-221ENST00000568859 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
SNAP23-221ENST00000568859 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.3
SNAP23-221ENST00000568859 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
SNAP23-221ENST00000568859 SYNJ2O15056 1496 aa29.29■■■□□ 2.28
SNAP23-221ENST00000568859 FGD5Q6ZNL6 1462 aa29.28■■■□□ 2.28
SNAP23-221ENST00000568859 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
SNAP23-221ENST00000568859 CUX1P39880 1505 aa29.1■■■□□ 2.25
SNAP23-221ENST00000568859 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
SNAP23-221ENST00000568859 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
SNAP23-221ENST00000568859 GRIN2AQ12879 1464 aa28.9■■■□□ 2.22
SNAP23-221ENST00000568859 ABCA5Q8WWZ7 1642 aa28.89■■■□□ 2.22
SNAP23-221ENST00000568859 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
SNAP23-221ENST00000568859 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
SNAP23-221ENST00000568859 NUP160Q12769 1436 aa28.82■■■□□ 2.2
SNAP23-221ENST00000568859 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
SNAP23-221ENST00000568859 KIF13AQ9H1H9 1805 aa28.74■■■□□ 2.19
SNAP23-221ENST00000568859 SHROOM2Q13796 1616 aa28.74■■■□□ 2.19
SNAP23-221ENST00000568859 FHAD1B1AJZ9 1412 aa28.71■■■□□ 2.19
SNAP23-221ENST00000568859 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
SNAP23-221ENST00000568859 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNAP23-221ENST00000568859 FAM69CQ0P6D2 419 aa28.66■■■□□ 2.18
SNAP23-221ENST00000568859 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
SNAP23-221ENST00000568859 ABCC10Q5T3U5 1492 aa28.6■■■□□ 2.17
SNAP23-221ENST00000568859 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
SNAP23-221ENST00000568859 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms