RNA–Protein interactions for RNA: ENST00000568857.5

HSDL1-207, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

TSL 4

Gene HSDL1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-207ENST00000568857 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
HSDL1-207ENST00000568857 ABCC9O60706 1549 aa26.09■■□□□ 1.77
HSDL1-207ENST00000568857 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
HSDL1-207ENST00000568857 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
HSDL1-207ENST00000568857 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.52
HSDL1-207ENST00000568857 NACADO15069 1562 aa24.28■■□□□ 1.48
HSDL1-207ENST00000568857 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
HSDL1-207ENST00000568857 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
HSDL1-207ENST00000568857 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
HSDL1-207ENST00000568857 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
HSDL1-207ENST00000568857 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
HSDL1-207ENST00000568857 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
HSDL1-207ENST00000568857 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
HSDL1-207ENST00000568857 SHROOM4Q9ULL8 1493 aa23.47■■□□□ 1.35
HSDL1-207ENST00000568857 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
HSDL1-207ENST00000568857 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
HSDL1-207ENST00000568857 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
HSDL1-207ENST00000568857 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
HSDL1-207ENST00000568857 DNAJC5Q9H3Z4 198 aa23.23■■□□□ 1.31
HSDL1-207ENST00000568857 CUX2O14529 1486 aa22.65■■□□□ 1.22
HSDL1-207ENST00000568857 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
HSDL1-207ENST00000568857 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
HSDL1-207ENST00000568857 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
HSDL1-207ENST00000568857 NESP48681 1621 aa22.26■■□□□ 1.15
HSDL1-207ENST00000568857 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
HSDL1-207ENST00000568857 SMARCA2P51531 1590 aa22.2■■□□□ 1.14
HSDL1-207ENST00000568857 SMARCA4P51532 1647 aa22.14■■□□□ 1.14
HSDL1-207ENST00000568857 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
HSDL1-207ENST00000568857 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
HSDL1-207ENST00000568857 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
HSDL1-207ENST00000568857 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
HSDL1-207ENST00000568857 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
HSDL1-207ENST00000568857 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
HSDL1-207ENST00000568857 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
HSDL1-207ENST00000568857 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
HSDL1-207ENST00000568857 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
HSDL1-207ENST00000568857 MRC2Q9UBG0 1479 aa21.74■■□□□ 1.07
HSDL1-207ENST00000568857 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
HSDL1-207ENST00000568857 WDR62O43379 1518 aa21.69■■□□□ 1.06
HSDL1-207ENST00000568857 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
HSDL1-207ENST00000568857 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
HSDL1-207ENST00000568857 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
HSDL1-207ENST00000568857 WIZO95785 1651 aa21.5■■□□□ 1.03
HSDL1-207ENST00000568857 CFTRP13569 1480 aa21.37■■□□□ 1.01
HSDL1-207ENST00000568857 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
HSDL1-207ENST00000568857 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1
HSDL1-207ENST00000568857 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1
HSDL1-207ENST00000568857 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1
HSDL1-207ENST00000568857 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
HSDL1-207ENST00000568857 TOP2AP11388 1531 aaKnown RBP21.17■□□□□ 0.98
HSDL1-207ENST00000568857 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
HSDL1-207ENST00000568857 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.98
HSDL1-207ENST00000568857 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
HSDL1-207ENST00000568857 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
HSDL1-207ENST00000568857 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
HSDL1-207ENST00000568857 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
HSDL1-207ENST00000568857 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
HSDL1-207ENST00000568857 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.95
HSDL1-207ENST00000568857 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
HSDL1-207ENST00000568857 CHD1O14646 1710 aa20.95■□□□□ 0.94
HSDL1-207ENST00000568857 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
HSDL1-207ENST00000568857 ABCC8Q09428 1581 aa20.94■□□□□ 0.94
HSDL1-207ENST00000568857 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.94
HSDL1-207ENST00000568857 FBLN2P98095 1184 aa20.91■□□□□ 0.94
HSDL1-207ENST00000568857 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
HSDL1-207ENST00000568857 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
HSDL1-207ENST00000568857 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
HSDL1-207ENST00000568857 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
HSDL1-207ENST00000568857 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
HSDL1-207ENST00000568857 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
HSDL1-207ENST00000568857 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
HSDL1-207ENST00000568857 SOGA1O94964 1423 aa20.7■□□□□ 0.9
HSDL1-207ENST00000568857 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
HSDL1-207ENST00000568857 CHMP7Q8WUX9 453 aaPredicted RBP20.66■□□□□ 0.9
HSDL1-207ENST00000568857 SYNJ1O43426 1573 aa20.64■□□□□ 0.9
HSDL1-207ENST00000568857 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
HSDL1-207ENST00000568857 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
HSDL1-207ENST00000568857 FGD5Q6ZNL6 1462 aa20.58■□□□□ 0.89
HSDL1-207ENST00000568857 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
HSDL1-207ENST00000568857 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
HSDL1-207ENST00000568857 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
HSDL1-207ENST00000568857 CUX1P39880 1505 aa20.48■□□□□ 0.87
HSDL1-207ENST00000568857 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
HSDL1-207ENST00000568857 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
HSDL1-207ENST00000568857 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
HSDL1-207ENST00000568857 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
HSDL1-207ENST00000568857 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
HSDL1-207ENST00000568857 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
HSDL1-207ENST00000568857 NUP160Q12769 1436 aa20.23■□□□□ 0.83
HSDL1-207ENST00000568857 KIF13AQ9H1H9 1805 aa20.2■□□□□ 0.82
HSDL1-207ENST00000568857 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
HSDL1-207ENST00000568857 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
HSDL1-207ENST00000568857 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
HSDL1-207ENST00000568857 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
HSDL1-207ENST00000568857 PRG4Q92954 1404 aaPredicted RBP20.1■□□□□ 0.81
HSDL1-207ENST00000568857 FAM69CQ0P6D2 419 aa20.09■□□□□ 0.81
HSDL1-207ENST00000568857 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
HSDL1-207ENST00000568857 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
HSDL1-207ENST00000568857 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
HSDL1-207ENST00000568857 NPM1P06748 294 aaKnown RBP eCLIP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms