RNA–Protein interactions for RNA: ENST00000568233.5

NUTF2-203, Transcript of nuclear transport factor 2, humanhuman

TSL 2

Gene NUTF2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUTF2-203ENST00000568233 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
NUTF2-203ENST00000568233 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
NUTF2-203ENST00000568233 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
NUTF2-203ENST00000568233 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
NUTF2-203ENST00000568233 ABCC9O60706 1549 aa27.57■■■□□ 2
NUTF2-203ENST00000568233 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
NUTF2-203ENST00000568233 NACADO15069 1562 aa26.49■■□□□ 1.83
NUTF2-203ENST00000568233 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
NUTF2-203ENST00000568233 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
NUTF2-203ENST00000568233 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
NUTF2-203ENST00000568233 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
NUTF2-203ENST00000568233 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
NUTF2-203ENST00000568233 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
NUTF2-203ENST00000568233 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
NUTF2-203ENST00000568233 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
NUTF2-203ENST00000568233 SHROOM4Q9ULL8 1493 aa25.51■■□□□ 1.67
NUTF2-203ENST00000568233 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
NUTF2-203ENST00000568233 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
NUTF2-203ENST00000568233 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
NUTF2-203ENST00000568233 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
NUTF2-203ENST00000568233 CC2D2AQ9P2K1 1620 aa24.96■■□□□ 1.59
NUTF2-203ENST00000568233 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
NUTF2-203ENST00000568233 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
NUTF2-203ENST00000568233 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
NUTF2-203ENST00000568233 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
NUTF2-203ENST00000568233 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
NUTF2-203ENST00000568233 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
NUTF2-203ENST00000568233 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
NUTF2-203ENST00000568233 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
NUTF2-203ENST00000568233 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
NUTF2-203ENST00000568233 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
NUTF2-203ENST00000568233 WIZO95785 1651 aa24.05■■□□□ 1.44
NUTF2-203ENST00000568233 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
NUTF2-203ENST00000568233 NESP48681 1621 aa23.83■■□□□ 1.41
NUTF2-203ENST00000568233 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
NUTF2-203ENST00000568233 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
NUTF2-203ENST00000568233 ERCC6Q03468 1493 aa23.8■■□□□ 1.4
NUTF2-203ENST00000568233 CADPSQ9ULU8 1353 aa23.7■■□□□ 1.38
NUTF2-203ENST00000568233 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
NUTF2-203ENST00000568233 FOXD1Q16676 465 aa23.62■■□□□ 1.37
NUTF2-203ENST00000568233 CUX2O14529 1486 aa23.62■■□□□ 1.37
NUTF2-203ENST00000568233 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
NUTF2-203ENST00000568233 CFTRP13569 1480 aa23.56■■□□□ 1.36
NUTF2-203ENST00000568233 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
NUTF2-203ENST00000568233 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
NUTF2-203ENST00000568233 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
NUTF2-203ENST00000568233 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
NUTF2-203ENST00000568233 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
NUTF2-203ENST00000568233 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
NUTF2-203ENST00000568233 WDR62O43379 1518 aa23.33■■□□□ 1.33
NUTF2-203ENST00000568233 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
NUTF2-203ENST00000568233 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
NUTF2-203ENST00000568233 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
NUTF2-203ENST00000568233 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
NUTF2-203ENST00000568233 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
NUTF2-203ENST00000568233 DNAJC5Q9H3Z4 198 aa22.96■■□□□ 1.27
NUTF2-203ENST00000568233 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
NUTF2-203ENST00000568233 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
NUTF2-203ENST00000568233 CUX1P39880 1505 aa22.82■■□□□ 1.24
NUTF2-203ENST00000568233 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
NUTF2-203ENST00000568233 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
NUTF2-203ENST00000568233 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
NUTF2-203ENST00000568233 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
NUTF2-203ENST00000568233 SOGA1O94964 1423 aa22.74■■□□□ 1.23
NUTF2-203ENST00000568233 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
NUTF2-203ENST00000568233 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
NUTF2-203ENST00000568233 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.228e-7■■■■■ 29.6
NUTF2-203ENST00000568233 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
NUTF2-203ENST00000568233 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.21
NUTF2-203ENST00000568233 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
NUTF2-203ENST00000568233 PLPPR3Q6T4P5 718 aa22.62■■□□□ 1.21
NUTF2-203ENST00000568233 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
NUTF2-203ENST00000568233 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
NUTF2-203ENST00000568233 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
NUTF2-203ENST00000568233 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
NUTF2-203ENST00000568233 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
NUTF2-203ENST00000568233 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
NUTF2-203ENST00000568233 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
NUTF2-203ENST00000568233 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
NUTF2-203ENST00000568233 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
NUTF2-203ENST00000568233 CHD1O14646 1710 aa22.46■■□□□ 1.19
NUTF2-203ENST00000568233 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
NUTF2-203ENST00000568233 FBLN2P98095 1184 aa22.39■■□□□ 1.17
NUTF2-203ENST00000568233 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
NUTF2-203ENST00000568233 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
NUTF2-203ENST00000568233 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
NUTF2-203ENST00000568233 ADAMTS12P58397 1594 aa22.27■■□□□ 1.16
NUTF2-203ENST00000568233 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
NUTF2-203ENST00000568233 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
NUTF2-203ENST00000568233 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
NUTF2-203ENST00000568233 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
NUTF2-203ENST00000568233 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
NUTF2-203ENST00000568233 ARHGEF11O15085 1522 aa22.22■■□□□ 1.15
NUTF2-203ENST00000568233 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
NUTF2-203ENST00000568233 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
NUTF2-203ENST00000568233 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
NUTF2-203ENST00000568233 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
NUTF2-203ENST00000568233 NUP160Q12769 1436 aa22.12■■□□□ 1.13
NUTF2-203ENST00000568233 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
NUTF2-203ENST00000568233 ADRA2BP18089 450 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms