RNA–Protein interactions for RNA: ENST00000568228.5

CMC2-219, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3

Gene CMC2, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-219ENST00000568228 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
CMC2-219ENST00000568228 ABCC9O60706 1549 aa27.57■■■□□ 2
CMC2-219ENST00000568228 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
CMC2-219ENST00000568228 RB1CC1Q8TDY2 1594 aa26.13■■□□□ 1.77
CMC2-219ENST00000568228 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
CMC2-219ENST00000568228 NACADO15069 1562 aa25.85■■□□□ 1.73
CMC2-219ENST00000568228 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
CMC2-219ENST00000568228 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
CMC2-219ENST00000568228 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
CMC2-219ENST00000568228 MYO15BQ96JP2 1530 aa25.36■■□□□ 1.65
CMC2-219ENST00000568228 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
CMC2-219ENST00000568228 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
CMC2-219ENST00000568228 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
CMC2-219ENST00000568228 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
CMC2-219ENST00000568228 SCRIBQ14160 1630 aa24.92■■□□□ 1.58
CMC2-219ENST00000568228 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
CMC2-219ENST00000568228 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
CMC2-219ENST00000568228 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
CMC2-219ENST00000568228 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
CMC2-219ENST00000568228 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
CMC2-219ENST00000568228 CUX2O14529 1486 aa23.83■■□□□ 1.41
CMC2-219ENST00000568228 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
CMC2-219ENST00000568228 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
CMC2-219ENST00000568228 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
CMC2-219ENST00000568228 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
CMC2-219ENST00000568228 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
CMC2-219ENST00000568228 NESP48681 1621 aa23.59■■□□□ 1.37
CMC2-219ENST00000568228 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
CMC2-219ENST00000568228 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
CMC2-219ENST00000568228 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
CMC2-219ENST00000568228 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
CMC2-219ENST00000568228 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
CMC2-219ENST00000568228 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
CMC2-219ENST00000568228 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
CMC2-219ENST00000568228 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
CMC2-219ENST00000568228 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
CMC2-219ENST00000568228 WIZO95785 1651 aa23.09■■□□□ 1.29
CMC2-219ENST00000568228 MRC2Q9UBG0 1479 aa23.07■■□□□ 1.28
CMC2-219ENST00000568228 WDR62O43379 1518 aa23.03■■□□□ 1.28
CMC2-219ENST00000568228 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
CMC2-219ENST00000568228 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.26
CMC2-219ENST00000568228 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
CMC2-219ENST00000568228 CFTRP13569 1480 aa22.79■■□□□ 1.24
CMC2-219ENST00000568228 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
CMC2-219ENST00000568228 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
CMC2-219ENST00000568228 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
CMC2-219ENST00000568228 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
CMC2-219ENST00000568228 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
CMC2-219ENST00000568228 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
CMC2-219ENST00000568228 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
CMC2-219ENST00000568228 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
CMC2-219ENST00000568228 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
CMC2-219ENST00000568228 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
CMC2-219ENST00000568228 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
CMC2-219ENST00000568228 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
CMC2-219ENST00000568228 EIF4G3O43432 1585 aaKnown RBP22.39■■□□□ 1.18
CMC2-219ENST00000568228 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
CMC2-219ENST00000568228 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
CMC2-219ENST00000568228 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
CMC2-219ENST00000568228 CHD1O14646 1710 aa22.31■■□□□ 1.16
CMC2-219ENST00000568228 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
CMC2-219ENST00000568228 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
CMC2-219ENST00000568228 CYB5RLQ6IPT4 315 aa22.18■■□□□ 1.14
CMC2-219ENST00000568228 POLA1P09884 1462 aaPredicted RBP22.17■■□□□ 1.14
CMC2-219ENST00000568228 FBLN2P98095 1184 aa22.16■■□□□ 1.14
CMC2-219ENST00000568228 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
CMC2-219ENST00000568228 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
CMC2-219ENST00000568228 TRHP20396 242 aaPredicted RBP22.06■■□□□ 1.12
CMC2-219ENST00000568228 SOGA1O94964 1423 aa22.05■■□□□ 1.12
CMC2-219ENST00000568228 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
CMC2-219ENST00000568228 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
CMC2-219ENST00000568228 WDR97A6NE52 1622 aa22.01■■□□□ 1.11
CMC2-219ENST00000568228 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
CMC2-219ENST00000568228 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
CMC2-219ENST00000568228 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
CMC2-219ENST00000568228 CUX1P39880 1505 aa21.94■■□□□ 1.1
CMC2-219ENST00000568228 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
CMC2-219ENST00000568228 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
CMC2-219ENST00000568228 PBRM1Q86U86 1689 aa21.9■■□□□ 1.1
CMC2-219ENST00000568228 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
CMC2-219ENST00000568228 SYNJ2O15056 1496 aa21.86■■□□□ 1.09
CMC2-219ENST00000568228 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
CMC2-219ENST00000568228 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
CMC2-219ENST00000568228 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
CMC2-219ENST00000568228 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
CMC2-219ENST00000568228 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
CMC2-219ENST00000568228 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
CMC2-219ENST00000568228 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
CMC2-219ENST00000568228 CEP170Q5SW79 1584 aa21.59■■□□□ 1.05
CMC2-219ENST00000568228 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
CMC2-219ENST00000568228 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
CMC2-219ENST00000568228 BIVM-ERCC5R4GMW8 1640 aa21.56■■□□□ 1.04
CMC2-219ENST00000568228 TOP2BQ02880 1626 aa21.54■■□□□ 1.04
CMC2-219ENST00000568228 NUP160Q12769 1436 aa21.53■■□□□ 1.04
CMC2-219ENST00000568228 SHROOM2Q13796 1616 aa21.51■■□□□ 1.03
CMC2-219ENST00000568228 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
CMC2-219ENST00000568228 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
CMC2-219ENST00000568228 KIF13AQ9H1H9 1805 aa21.42■■□□□ 1.02
CMC2-219ENST00000568228 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
CMC2-219ENST00000568228 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms