RNA–Protein interactions for RNA: ENST00000567232.1

TNRC6A-212, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-212ENST00000567232 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
TNRC6A-212ENST00000567232 ABCC9O60706 1549 aa22.17■■□□□ 1.14
TNRC6A-212ENST00000567232 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
TNRC6A-212ENST00000567232 DNAJC5Q9H3Z4 198 aa21.71■■□□□ 1.07
TNRC6A-212ENST00000567232 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
TNRC6A-212ENST00000567232 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
TNRC6A-212ENST00000567232 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
TNRC6A-212ENST00000567232 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
TNRC6A-212ENST00000567232 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
TNRC6A-212ENST00000567232 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
TNRC6A-212ENST00000567232 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
TNRC6A-212ENST00000567232 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
TNRC6A-212ENST00000567232 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
TNRC6A-212ENST00000567232 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
TNRC6A-212ENST00000567232 CUX2O14529 1486 aa19.65■□□□□ 0.74
TNRC6A-212ENST00000567232 NACADO15069 1562 aa19.62■□□□□ 0.73
TNRC6A-212ENST00000567232 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
TNRC6A-212ENST00000567232 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
TNRC6A-212ENST00000567232 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
TNRC6A-212ENST00000567232 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
TNRC6A-212ENST00000567232 ILDR1Q86SU0 546 aaPredicted RBP18.96■□□□□ 0.63
TNRC6A-212ENST00000567232 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
TNRC6A-212ENST00000567232 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
TNRC6A-212ENST00000567232 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
TNRC6A-212ENST00000567232 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
TNRC6A-212ENST00000567232 NESP48681 1621 aa18.58■□□□□ 0.56
TNRC6A-212ENST00000567232 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
TNRC6A-212ENST00000567232 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
TNRC6A-212ENST00000567232 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
TNRC6A-212ENST00000567232 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
TNRC6A-212ENST00000567232 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
TNRC6A-212ENST00000567232 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
TNRC6A-212ENST00000567232 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
TNRC6A-212ENST00000567232 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
TNRC6A-212ENST00000567232 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
TNRC6A-212ENST00000567232 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
TNRC6A-212ENST00000567232 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
TNRC6A-212ENST00000567232 LAMC3Q9Y6N6 1575 aa17.99■□□□□ 0.47
TNRC6A-212ENST00000567232 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
TNRC6A-212ENST00000567232 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
TNRC6A-212ENST00000567232 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
TNRC6A-212ENST00000567232 WDR62O43379 1518 aa17.94■□□□□ 0.46
TNRC6A-212ENST00000567232 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
TNRC6A-212ENST00000567232 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
TNRC6A-212ENST00000567232 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
TNRC6A-212ENST00000567232 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
TNRC6A-212ENST00000567232 LMTK3Q96Q04 1460 aa17.79■□□□□ 0.44
TNRC6A-212ENST00000567232 KDM4FA0A1W2PPD8 638 aa17.78■□□□□ 0.44
TNRC6A-212ENST00000567232 SOCS7O14512 581 aa17.76■□□□□ 0.43
TNRC6A-212ENST00000567232 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
TNRC6A-212ENST00000567232 ILDR2Q71H61 639 aa17.67■□□□□ 0.42
TNRC6A-212ENST00000567232 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
TNRC6A-212ENST00000567232 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
TNRC6A-212ENST00000567232 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
TNRC6A-212ENST00000567232 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
TNRC6A-212ENST00000567232 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
TNRC6A-212ENST00000567232 ZNF608Q9ULD9 1512 aaPredicted RBP17.51■□□□□ 0.39
TNRC6A-212ENST00000567232 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
TNRC6A-212ENST00000567232 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
TNRC6A-212ENST00000567232 FBLN2P98095 1184 aa17.46■□□□□ 0.39
TNRC6A-212ENST00000567232 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
TNRC6A-212ENST00000567232 HECW2Q9P2P5 1572 aa17.41■□□□□ 0.38
TNRC6A-212ENST00000567232 URB2Q14146 1524 aaKnown RBP17.4■□□□□ 0.38
TNRC6A-212ENST00000567232 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
TNRC6A-212ENST00000567232 CHD1O14646 1710 aa17.36■□□□□ 0.37
TNRC6A-212ENST00000567232 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
TNRC6A-212ENST00000567232 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
TNRC6A-212ENST00000567232 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
TNRC6A-212ENST00000567232 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
TNRC6A-212ENST00000567232 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
TNRC6A-212ENST00000567232 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.343e-9■■■■□ 20.8
TNRC6A-212ENST00000567232 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
TNRC6A-212ENST00000567232 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
TNRC6A-212ENST00000567232 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
TNRC6A-212ENST00000567232 FAM69CQ0P6D2 419 aa17.06■□□□□ 0.32
TNRC6A-212ENST00000567232 CFTRP13569 1480 aa17.04■□□□□ 0.32
TNRC6A-212ENST00000567232 KDM6BO15054 1643 aa17.03■□□□□ 0.32
TNRC6A-212ENST00000567232 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
TNRC6A-212ENST00000567232 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
TNRC6A-212ENST00000567232 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
TNRC6A-212ENST00000567232 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.3
TNRC6A-212ENST00000567232 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
TNRC6A-212ENST00000567232 ABCC10Q5T3U5 1492 aa16.87■□□□□ 0.29
TNRC6A-212ENST00000567232 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
TNRC6A-212ENST00000567232 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
TNRC6A-212ENST00000567232 TDRD9Q8NDG6 1382 aaKnown RBP16.81■□□□□ 0.28
TNRC6A-212ENST00000567232 CERKQ8TCT0 537 aa16.77■□□□□ 0.28
TNRC6A-212ENST00000567232 TSPOAP1O95153 1857 aa16.73■□□□□ 0.27
TNRC6A-212ENST00000567232 DIP2BQ9P265 1576 aa16.73■□□□□ 0.27
TNRC6A-212ENST00000567232 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
TNRC6A-212ENST00000567232 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
TNRC6A-212ENST00000567232 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
TNRC6A-212ENST00000567232 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
TNRC6A-212ENST00000567232 WIZO95785 1651 aa16.63■□□□□ 0.25
TNRC6A-212ENST00000567232 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
TNRC6A-212ENST00000567232 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
TNRC6A-212ENST00000567232 FOXD1Q16676 465 aa16.6■□□□□ 0.25
TNRC6A-212ENST00000567232 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
TNRC6A-212ENST00000567232 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
TNRC6A-212ENST00000567232 COL17A1Q9UMD9 1497 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms