RNA–Protein interactions for RNA: ENST00000567059.5

KIFC3-229, Transcript of kinesin family member C3, humanhuman

TSL 3

Gene KIFC3, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-229ENST00000567059 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
KIFC3-229ENST00000567059 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
KIFC3-229ENST00000567059 ABCC9O60706 1549 aa36.37■■■■□ 3.41
KIFC3-229ENST00000567059 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
KIFC3-229ENST00000567059 RB1CC1Q8TDY2 1594 aa34.89■■■■□ 3.18
KIFC3-229ENST00000567059 NACADO15069 1562 aa34.88■■■■□ 3.17
KIFC3-229ENST00000567059 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
KIFC3-229ENST00000567059 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
KIFC3-229ENST00000567059 DCAF1Q9Y4B6 1507 aa34.55■■■■□ 3.12
KIFC3-229ENST00000567059 UNC13AQ9UPW8 1703 aa34.09■■■■□ 3.05
KIFC3-229ENST00000567059 PABPN1Q86U42 306 aaKnown RBP eCLIP34.06■■■■□ 3.04
KIFC3-229ENST00000567059 BICRAQ9NZM4 1560 aa33.95■■■■□ 3.03
KIFC3-229ENST00000567059 SCRIBQ14160 1630 aa33.83■■■■□ 3.01
KIFC3-229ENST00000567059 DNAJC5BQ9UF47 199 aa33.58■■■□□ 2.97
KIFC3-229ENST00000567059 SHROOM4Q9ULL8 1493 aa33.48■■■□□ 2.95
KIFC3-229ENST00000567059 EIF4G1Q04637 1599 aaKnown RBP33■■■□□ 2.87
KIFC3-229ENST00000567059 CC2D2AQ9P2K1 1620 aa32.86■■■□□ 2.85
KIFC3-229ENST00000567059 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
KIFC3-229ENST00000567059 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
KIFC3-229ENST00000567059 BAZ1AQ9NRL2 1556 aaPredicted RBP32.32■■■□□ 2.77
KIFC3-229ENST00000567059 ATAD2BQ9ULI0 1458 aa32.28■■■□□ 2.76
KIFC3-229ENST00000567059 NCAPD3P42695 1498 aa32.27■■■□□ 2.76
KIFC3-229ENST00000567059 MROH2BQ7Z745 1585 aa32.23■■■□□ 2.75
KIFC3-229ENST00000567059 SMARCA2P51531 1590 aa32.14■■■□□ 2.74
KIFC3-229ENST00000567059 PEG3Q9GZU2 1588 aa32.1■■■□□ 2.73
KIFC3-229ENST00000567059 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
KIFC3-229ENST00000567059 BAZ1BQ9UIG0 1483 aaKnown RBP31.93■■■□□ 2.7
KIFC3-229ENST00000567059 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
KIFC3-229ENST00000567059 WIZO95785 1651 aa31.83■■■□□ 2.69
KIFC3-229ENST00000567059 NESP48681 1621 aa31.5■■■□□ 2.63
KIFC3-229ENST00000567059 TOP2AP11388 1531 aaKnown RBP31.47■■■□□ 2.63
KIFC3-229ENST00000567059 CADPSQ9ULU8 1353 aa31.32■■■□□ 2.6
KIFC3-229ENST00000567059 LAMC3Q9Y6N6 1575 aa31.32■■■□□ 2.6
KIFC3-229ENST00000567059 ERCC6Q03468 1493 aa31.26■■■□□ 2.59
KIFC3-229ENST00000567059 CCDC88BA6NC98 1476 aa31.18■■■□□ 2.58
KIFC3-229ENST00000567059 PDS5BQ9NTI5 1447 aa31.14■■■□□ 2.58
KIFC3-229ENST00000567059 CFTRP13569 1480 aa31.13■■■□□ 2.57
KIFC3-229ENST00000567059 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
KIFC3-229ENST00000567059 KIF21AQ7Z4S6 1674 aa31.01■■■□□ 2.55
KIFC3-229ENST00000567059 CUX2O14529 1486 aa30.97■■■□□ 2.55
KIFC3-229ENST00000567059 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.54
KIFC3-229ENST00000567059 FANCD2Q9BXW9 1451 aa30.92■■■□□ 2.54
KIFC3-229ENST00000567059 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
KIFC3-229ENST00000567059 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.53
KIFC3-229ENST00000567059 WDR62O43379 1518 aa30.73■■■□□ 2.51
KIFC3-229ENST00000567059 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
KIFC3-229ENST00000567059 URB2Q14146 1524 aaKnown RBP30.65■■■□□ 2.5
KIFC3-229ENST00000567059 TOPBP1Q92547 1522 aa30.43■■■□□ 2.46
KIFC3-229ENST00000567059 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
KIFC3-229ENST00000567059 DNMBPQ6XZF7 1577 aa30.35■■■□□ 2.45
KIFC3-229ENST00000567059 IFT140Q96RY7 1462 aa30.23■■■□□ 2.43
KIFC3-229ENST00000567059 CUX1P39880 1505 aa30.22■■■□□ 2.43
KIFC3-229ENST00000567059 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
KIFC3-229ENST00000567059 POLA1P09884 1462 aaPredicted RBP30.18■■■□□ 2.42
KIFC3-229ENST00000567059 ZNF608Q9ULD9 1512 aaPredicted RBP30.16■■■□□ 2.42
KIFC3-229ENST00000567059 TARBP1Q13395 1621 aaKnown RBP30.11■■■□□ 2.41
KIFC3-229ENST00000567059 FGD5Q6ZNL6 1462 aa30.09■■■□□ 2.41
KIFC3-229ENST00000567059 RAD54L2Q9Y4B4 1467 aa30.09■■■□□ 2.41
KIFC3-229ENST00000567059 SOGA1O94964 1423 aa30.07■■■□□ 2.4
KIFC3-229ENST00000567059 WRNQ14191 1432 aaPredicted RBP eCLIP29.99■■■□□ 2.39
KIFC3-229ENST00000567059 AQRO60306 1485 aaKnown RBP eCLIP29.99■■■□□ 2.39
KIFC3-229ENST00000567059 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
KIFC3-229ENST00000567059 EIF4G3O43432 1585 aaKnown RBP29.93■■■□□ 2.38
KIFC3-229ENST00000567059 SYNJ1O43426 1573 aa29.92■■■□□ 2.38
KIFC3-229ENST00000567059 TOP2BQ02880 1626 aa29.9■■■□□ 2.38
KIFC3-229ENST00000567059 BIVM-ERCC5R4GMW8 1640 aa29.87■■■□□ 2.37
KIFC3-229ENST00000567059 ABCA10Q8WWZ4 1543 aa29.81■■■□□ 2.36
KIFC3-229ENST00000567059 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
KIFC3-229ENST00000567059 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
KIFC3-229ENST00000567059 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
KIFC3-229ENST00000567059 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
KIFC3-229ENST00000567059 ABCA5Q8WWZ7 1642 aa29.65■■■□□ 2.34
KIFC3-229ENST00000567059 SNAPC4Q5SXM2 1469 aa29.64■■■□□ 2.34
KIFC3-229ENST00000567059 MAGI1Q96QZ7 1491 aaPredicted RBP29.58■■■□□ 2.33
KIFC3-229ENST00000567059 FBLN2P98095 1184 aa29.57■■■□□ 2.32
KIFC3-229ENST00000567059 CHD1O14646 1710 aa29.52■■■□□ 2.32
KIFC3-229ENST00000567059 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
KIFC3-229ENST00000567059 CHMP7Q8WUX9 453 aaPredicted RBP29.5■■■□□ 2.31
KIFC3-229ENST00000567059 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
KIFC3-229ENST00000567059 ERICH3Q5RHP9 1530 aa29.41■■■□□ 2.3
KIFC3-229ENST00000567059 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
KIFC3-229ENST00000567059 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
KIFC3-229ENST00000567059 IGF1RP08069 1367 aa29.35■■■□□ 2.29
KIFC3-229ENST00000567059 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
KIFC3-229ENST00000567059 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
KIFC3-229ENST00000567059 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
KIFC3-229ENST00000567059 TRIM41Q8WV44 630 aa29.28■■■□□ 2.28
KIFC3-229ENST00000567059 ARHGEF11O15085 1522 aa29.23■■■□□ 2.27
KIFC3-229ENST00000567059 RIMBP3CA6NJZ7 1639 aa29.22■■■□□ 2.27
KIFC3-229ENST00000567059 RIMBP3BA6NNM3 1639 aa29.22■■■□□ 2.27
KIFC3-229ENST00000567059 RIMBP3Q9UFD9 1639 aa29.22■■■□□ 2.27
KIFC3-229ENST00000567059 NUP160Q12769 1436 aa29.21■■■□□ 2.27
KIFC3-229ENST00000567059 RUSC2Q8N2Y8 1516 aa29.19■■■□□ 2.26
KIFC3-229ENST00000567059 CEP170Q5SW79 1584 aa29.16■■■□□ 2.26
KIFC3-229ENST00000567059 CARMIL1Q5VZK9 1371 aa29.11■■■□□ 2.25
KIFC3-229ENST00000567059 CUL7Q14999 1698 aa29.07■■■□□ 2.24
KIFC3-229ENST00000567059 ARAP1Q96P48 1450 aa29.03■■■□□ 2.24
KIFC3-229ENST00000567059 CHIC1Q5VXU3 224 aa29.01■■■□□ 2.23
KIFC3-229ENST00000567059 CYB5RLQ6IPT4 315 aa29.01■■■□□ 2.23
KIFC3-229ENST00000567059 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms