RNA–Protein interactions for RNA: ENST00000567046.5

PDPR-208, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

TSL 2 BASIC

Gene PDPR, Length 1,207 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-208ENST00000567046 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
PDPR-208ENST00000567046 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
PDPR-208ENST00000567046 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
PDPR-208ENST00000567046 ABCC9O60706 1549 aa21.3■■□□□ 1
PDPR-208ENST00000567046 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
PDPR-208ENST00000567046 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
PDPR-208ENST00000567046 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
PDPR-208ENST00000567046 NACADO15069 1562 aa21.01■□□□□ 0.95
PDPR-208ENST00000567046 RB1CC1Q8TDY2 1594 aa20.84■□□□□ 0.93
PDPR-208ENST00000567046 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
PDPR-208ENST00000567046 SCRIBQ14160 1630 aa20.54■□□□□ 0.88
PDPR-208ENST00000567046 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
PDPR-208ENST00000567046 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
PDPR-208ENST00000567046 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDPR-208ENST00000567046 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
PDPR-208ENST00000567046 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
PDPR-208ENST00000567046 BAZ1AQ9NRL2 1556 aaPredicted RBP19.86■□□□□ 0.77
PDPR-208ENST00000567046 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
PDPR-208ENST00000567046 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
PDPR-208ENST00000567046 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
PDPR-208ENST00000567046 WIZO95785 1651 aa19.59■□□□□ 0.73
PDPR-208ENST00000567046 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
PDPR-208ENST00000567046 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
PDPR-208ENST00000567046 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
PDPR-208ENST00000567046 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
PDPR-208ENST00000567046 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
PDPR-208ENST00000567046 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
PDPR-208ENST00000567046 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
PDPR-208ENST00000567046 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
PDPR-208ENST00000567046 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
PDPR-208ENST00000567046 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
PDPR-208ENST00000567046 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
PDPR-208ENST00000567046 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
PDPR-208ENST00000567046 CFTRP13569 1480 aa18.88■□□□□ 0.61
PDPR-208ENST00000567046 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
PDPR-208ENST00000567046 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
PDPR-208ENST00000567046 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
PDPR-208ENST00000567046 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
PDPR-208ENST00000567046 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
PDPR-208ENST00000567046 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
PDPR-208ENST00000567046 PDS5BQ9NTI5 1447 aa18.63■□□□□ 0.57
PDPR-208ENST00000567046 NESP48681 1621 aa18.63■□□□□ 0.57
PDPR-208ENST00000567046 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
PDPR-208ENST00000567046 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
PDPR-208ENST00000567046 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
PDPR-208ENST00000567046 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
PDPR-208ENST00000567046 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
PDPR-208ENST00000567046 CUX1P39880 1505 aa18.49■□□□□ 0.55
PDPR-208ENST00000567046 EEA1Q15075 1411 aa18.44■□□□□ 0.54
PDPR-208ENST00000567046 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
PDPR-208ENST00000567046 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
PDPR-208ENST00000567046 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
PDPR-208ENST00000567046 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
PDPR-208ENST00000567046 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
PDPR-208ENST00000567046 SOGA1O94964 1423 aa18.35■□□□□ 0.53
PDPR-208ENST00000567046 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
PDPR-208ENST00000567046 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.53
PDPR-208ENST00000567046 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
PDPR-208ENST00000567046 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
PDPR-208ENST00000567046 KIF27Q86VH2 1401 aa18.29■□□□□ 0.52
PDPR-208ENST00000567046 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.52
PDPR-208ENST00000567046 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
PDPR-208ENST00000567046 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
PDPR-208ENST00000567046 WDR62O43379 1518 aa18.23■□□□□ 0.51
PDPR-208ENST00000567046 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
PDPR-208ENST00000567046 CUX2O14529 1486 aa18.2■□□□□ 0.5
PDPR-208ENST00000567046 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
PDPR-208ENST00000567046 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
PDPR-208ENST00000567046 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
PDPR-208ENST00000567046 KIF21BO75037 1637 aa18.12■□□□□ 0.49
PDPR-208ENST00000567046 IGF1RP08069 1367 aa18.11■□□□□ 0.49
PDPR-208ENST00000567046 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
PDPR-208ENST00000567046 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
PDPR-208ENST00000567046 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
PDPR-208ENST00000567046 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
PDPR-208ENST00000567046 UBTFP17480 764 aaKnown RBP18.06■□□□□ 0.48
PDPR-208ENST00000567046 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
PDPR-208ENST00000567046 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
PDPR-208ENST00000567046 ERICH3Q5RHP9 1530 aa18.05■□□□□ 0.48
PDPR-208ENST00000567046 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
PDPR-208ENST00000567046 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
PDPR-208ENST00000567046 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
PDPR-208ENST00000567046 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
PDPR-208ENST00000567046 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
PDPR-208ENST00000567046 RAPGEF2Q9Y4G8 1499 aa18■□□□□ 0.47
PDPR-208ENST00000567046 CUL7Q14999 1698 aa17.99■□□□□ 0.47
PDPR-208ENST00000567046 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDPR-208ENST00000567046 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
PDPR-208ENST00000567046 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
PDPR-208ENST00000567046 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
PDPR-208ENST00000567046 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
PDPR-208ENST00000567046 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
PDPR-208ENST00000567046 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
PDPR-208ENST00000567046 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
PDPR-208ENST00000567046 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
PDPR-208ENST00000567046 CLIP1P30622 1438 aa17.8■□□□□ 0.44
PDPR-208ENST00000567046 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
PDPR-208ENST00000567046 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
PDPR-208ENST00000567046 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
PDPR-208ENST00000567046 CTTNBP2Q8WZ74 1663 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms