RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
CFDP1-207ENST00000566901 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
CFDP1-207ENST00000566901 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
CFDP1-207ENST00000566901 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
CFDP1-207ENST00000566901 ABCC9O60706 1549 aa25.5■■□□□ 1.67
CFDP1-207ENST00000566901 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
CFDP1-207ENST00000566901 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
CFDP1-207ENST00000566901 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
CFDP1-207ENST00000566901 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
CFDP1-207ENST00000566901 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
CFDP1-207ENST00000566901 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
CFDP1-207ENST00000566901 NACADO15069 1562 aa23.95■■□□□ 1.42
CFDP1-207ENST00000566901 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
CFDP1-207ENST00000566901 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
CFDP1-207ENST00000566901 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
CFDP1-207ENST00000566901 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
CFDP1-207ENST00000566901 BICRAQ9NZM4 1560 aa23.42■■□□□ 1.34
CFDP1-207ENST00000566901 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
CFDP1-207ENST00000566901 SHROOM4Q9ULL8 1493 aa23.21■■□□□ 1.31
CFDP1-207ENST00000566901 CC2D2AQ9P2K1 1620 aa23.02■■□□□ 1.28
CFDP1-207ENST00000566901 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
CFDP1-207ENST00000566901 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
CFDP1-207ENST00000566901 FOXD1Q16676 465 aa22.55■■□□□ 1.2
CFDP1-207ENST00000566901 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
CFDP1-207ENST00000566901 RSF1Q96T23 1441 aaPredicted RBP22.36■■□□□ 1.17
CFDP1-207ENST00000566901 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
CFDP1-207ENST00000566901 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.16
CFDP1-207ENST00000566901 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
CFDP1-207ENST00000566901 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
CFDP1-207ENST00000566901 WIZO95785 1651 aa22.11■■□□□ 1.13
CFDP1-207ENST00000566901 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
CFDP1-207ENST00000566901 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.13
CFDP1-207ENST00000566901 SMARCA2P51531 1590 aa22.08■■□□□ 1.12
CFDP1-207ENST00000566901 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
CFDP1-207ENST00000566901 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
CFDP1-207ENST00000566901 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
CFDP1-207ENST00000566901 CUX2O14529 1486 aa22■■□□□ 1.11
CFDP1-207ENST00000566901 HMGXB3Q12766 1538 aa21.94■■□□□ 1.1
CFDP1-207ENST00000566901 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
CFDP1-207ENST00000566901 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
CFDP1-207ENST00000566901 NESP48681 1621 aa21.84■■□□□ 1.09
CFDP1-207ENST00000566901 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
CFDP1-207ENST00000566901 THOC2Q8NI27 1593 aaKnown RBP21.66■■□□□ 1.06
CFDP1-207ENST00000566901 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
CFDP1-207ENST00000566901 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
CFDP1-207ENST00000566901 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
CFDP1-207ENST00000566901 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
CFDP1-207ENST00000566901 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
CFDP1-207ENST00000566901 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
CFDP1-207ENST00000566901 CFTRP13569 1480 aa21.35■■□□□ 1.01
CFDP1-207ENST00000566901 WDR62O43379 1518 aa21.3■■□□□ 1
CFDP1-207ENST00000566901 PRDM2Q13029 1718 aa21.29■■□□□ 1
CFDP1-207ENST00000566901 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
CFDP1-207ENST00000566901 ADRA2BP18089 450 aa21.28■■□□□ 1
CFDP1-207ENST00000566901 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
CFDP1-207ENST00000566901 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
CFDP1-207ENST00000566901 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
CFDP1-207ENST00000566901 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
CFDP1-207ENST00000566901 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
CFDP1-207ENST00000566901 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
CFDP1-207ENST00000566901 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
CFDP1-207ENST00000566901 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
CFDP1-207ENST00000566901 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
CFDP1-207ENST00000566901 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
CFDP1-207ENST00000566901 CUX1P39880 1505 aa20.92■□□□□ 0.94
CFDP1-207ENST00000566901 DNMBPQ6XZF7 1577 aa20.88■□□□□ 0.93
CFDP1-207ENST00000566901 MSH5O43196 834 aa20.84■□□□□ 0.93
CFDP1-207ENST00000566901 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
CFDP1-207ENST00000566901 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
CFDP1-207ENST00000566901 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
CFDP1-207ENST00000566901 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
CFDP1-207ENST00000566901 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
CFDP1-207ENST00000566901 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
CFDP1-207ENST00000566901 EEA1Q15075 1411 aa20.76■□□□□ 0.91
CFDP1-207ENST00000566901 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
CFDP1-207ENST00000566901 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
CFDP1-207ENST00000566901 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
CFDP1-207ENST00000566901 CHD1O14646 1710 aa20.67■□□□□ 0.9
CFDP1-207ENST00000566901 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
CFDP1-207ENST00000566901 SOGA1O94964 1423 aa20.63■□□□□ 0.89
CFDP1-207ENST00000566901 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
CFDP1-207ENST00000566901 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
CFDP1-207ENST00000566901 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.898e-9■□□□□ 9.4
CFDP1-207ENST00000566901 FBLN2P98095 1184 aa20.59■□□□□ 0.89
CFDP1-207ENST00000566901 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
CFDP1-207ENST00000566901 KIF27Q86VH2 1401 aa20.58■□□□□ 0.88
CFDP1-207ENST00000566901 RUSC2Q8N2Y8 1516 aa20.53■□□□□ 0.88
CFDP1-207ENST00000566901 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
CFDP1-207ENST00000566901 CYB5RLQ6IPT4 315 aa20.51■□□□□ 0.87
CFDP1-207ENST00000566901 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
CFDP1-207ENST00000566901 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
CFDP1-207ENST00000566901 KIF21BO75037 1637 aa20.46■□□□□ 0.87
CFDP1-207ENST00000566901 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
CFDP1-207ENST00000566901 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
CFDP1-207ENST00000566901 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
CFDP1-207ENST00000566901 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
CFDP1-207ENST00000566901 TRHP20396 242 aaPredicted RBP20.41■□□□□ 0.86
CFDP1-207ENST00000566901 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
CFDP1-207ENST00000566901 ERICH3Q5RHP9 1530 aa20.39■□□□□ 0.85
CFDP1-207ENST00000566901 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms