RNA–Protein interactions for RNA: ENST00000566863.1

RPAP1-209, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 4

Gene RPAP1, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-209ENST00000566863 NISCHQ9Y2I1 1504 aa34.79■■■■□ 3.16
RPAP1-209ENST00000566863 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.51
RPAP1-209ENST00000566863 ABCC9O60706 1549 aa29.35■■■□□ 2.29
RPAP1-209ENST00000566863 ZCCHC6Q5VYS8 1495 aaKnown RBP29.14■■■□□ 2.26
RPAP1-209ENST00000566863 DCAF1Q9Y4B6 1507 aa28.82■■■□□ 2.2
RPAP1-209ENST00000566863 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
RPAP1-209ENST00000566863 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
RPAP1-209ENST00000566863 NACADO15069 1562 aa28.67■■■□□ 2.18
RPAP1-209ENST00000566863 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
RPAP1-209ENST00000566863 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
RPAP1-209ENST00000566863 UNC13AQ9UPW8 1703 aa27.94■■■□□ 2.06
RPAP1-209ENST00000566863 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
RPAP1-209ENST00000566863 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
RPAP1-209ENST00000566863 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
RPAP1-209ENST00000566863 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
RPAP1-209ENST00000566863 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
RPAP1-209ENST00000566863 SMARCA4P51532 1647 aa26.89■■□□□ 1.9
RPAP1-209ENST00000566863 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
RPAP1-209ENST00000566863 MROH2BQ7Z745 1585 aa26.83■■□□□ 1.89
RPAP1-209ENST00000566863 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
RPAP1-209ENST00000566863 CC2D2AQ9P2K1 1620 aa26.6■■□□□ 1.85
RPAP1-209ENST00000566863 WIZO95785 1651 aa26.6■■□□□ 1.85
RPAP1-209ENST00000566863 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
RPAP1-209ENST00000566863 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
RPAP1-209ENST00000566863 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
RPAP1-209ENST00000566863 ATAD2BQ9ULI0 1458 aa26.54■■□□□ 1.84
RPAP1-209ENST00000566863 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
RPAP1-209ENST00000566863 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
RPAP1-209ENST00000566863 HMGXB3Q12766 1538 aa26.39■■□□□ 1.81
RPAP1-209ENST00000566863 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
RPAP1-209ENST00000566863 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
RPAP1-209ENST00000566863 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
RPAP1-209ENST00000566863 CFTRP13569 1480 aa25.66■■□□□ 1.7
RPAP1-209ENST00000566863 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
RPAP1-209ENST00000566863 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
RPAP1-209ENST00000566863 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
RPAP1-209ENST00000566863 NESP48681 1621 aa25.59■■□□□ 1.69
RPAP1-209ENST00000566863 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
RPAP1-209ENST00000566863 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
RPAP1-209ENST00000566863 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
RPAP1-209ENST00000566863 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
RPAP1-209ENST00000566863 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
RPAP1-209ENST00000566863 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
RPAP1-209ENST00000566863 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
RPAP1-209ENST00000566863 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
RPAP1-209ENST00000566863 SYNJ1O43426 1573 aa25.14■■□□□ 1.62
RPAP1-209ENST00000566863 CUX1P39880 1505 aa25.14■■□□□ 1.62
RPAP1-209ENST00000566863 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
RPAP1-209ENST00000566863 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
RPAP1-209ENST00000566863 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
RPAP1-209ENST00000566863 TOP2BQ02880 1626 aa25.11■■□□□ 1.61
RPAP1-209ENST00000566863 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
RPAP1-209ENST00000566863 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
RPAP1-209ENST00000566863 TOPBP1Q92547 1522 aa25.08■■□□□ 1.61
RPAP1-209ENST00000566863 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
RPAP1-209ENST00000566863 WDR62O43379 1518 aa25.05■■□□□ 1.6
RPAP1-209ENST00000566863 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
RPAP1-209ENST00000566863 POLA1P09884 1462 aaPredicted RBP24.9■■□□□ 1.58
RPAP1-209ENST00000566863 CUX2O14529 1486 aa24.79■■□□□ 1.56
RPAP1-209ENST00000566863 SOGA1O94964 1423 aa24.78■■□□□ 1.56
RPAP1-209ENST00000566863 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
RPAP1-209ENST00000566863 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
RPAP1-209ENST00000566863 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
RPAP1-209ENST00000566863 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
RPAP1-209ENST00000566863 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
RPAP1-209ENST00000566863 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
RPAP1-209ENST00000566863 EEA1Q15075 1411 aa24.62■■□□□ 1.53
RPAP1-209ENST00000566863 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
RPAP1-209ENST00000566863 RUSC2Q8N2Y8 1516 aa24.6■■□□□ 1.53
RPAP1-209ENST00000566863 ZNF608Q9ULD9 1512 aaPredicted RBP24.57■■□□□ 1.52
RPAP1-209ENST00000566863 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
RPAP1-209ENST00000566863 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
RPAP1-209ENST00000566863 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
RPAP1-209ENST00000566863 FAM9AQ8IZU1 332 aaPredicted RBP24.52■■□□□ 1.52
RPAP1-209ENST00000566863 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
RPAP1-209ENST00000566863 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.516e-6■■■■□ 25.1
RPAP1-209ENST00000566863 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
RPAP1-209ENST00000566863 GRIN2BQ13224 1484 aa24.45■■□□□ 1.5
RPAP1-209ENST00000566863 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
RPAP1-209ENST00000566863 CUL7Q14999 1698 aa24.41■■□□□ 1.5
RPAP1-209ENST00000566863 IGF1RP08069 1367 aa24.4■■□□□ 1.5
RPAP1-209ENST00000566863 KIF21BO75037 1637 aa24.35■■□□□ 1.49
RPAP1-209ENST00000566863 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
RPAP1-209ENST00000566863 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
RPAP1-209ENST00000566863 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
RPAP1-209ENST00000566863 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
RPAP1-209ENST00000566863 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
RPAP1-209ENST00000566863 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
RPAP1-209ENST00000566863 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
RPAP1-209ENST00000566863 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
RPAP1-209ENST00000566863 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
RPAP1-209ENST00000566863 EHMT2Q96KQ7 1210 aa24.16■■□□□ 1.46
RPAP1-209ENST00000566863 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
RPAP1-209ENST00000566863 CHD1O14646 1710 aa24.13■■□□□ 1.45
RPAP1-209ENST00000566863 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
RPAP1-209ENST00000566863 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
RPAP1-209ENST00000566863 FBLN2P98095 1184 aa24.08■■□□□ 1.45
RPAP1-209ENST00000566863 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
RPAP1-209ENST00000566863 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
RPAP1-209ENST00000566863 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms