RNA–Protein interactions for RNA: ENST00000566415.1

LAT-213, Transcript of linker for activation of T cells, humanhuman

TSL 2

Gene LAT, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAT-213ENST00000566415 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
LAT-213ENST00000566415 CCDC180Q9P1Z9 1646 aa27.11■■□□□ 1.93
LAT-213ENST00000566415 ABCC9O60706 1549 aa26.58■■□□□ 1.85
LAT-213ENST00000566415 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
LAT-213ENST00000566415 NACADO15069 1562 aa25.47■■□□□ 1.67
LAT-213ENST00000566415 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
LAT-213ENST00000566415 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
LAT-213ENST00000566415 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
LAT-213ENST00000566415 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
LAT-213ENST00000566415 DCAF1Q9Y4B6 1507 aa25.05■■□□□ 1.6
LAT-213ENST00000566415 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
LAT-213ENST00000566415 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
LAT-213ENST00000566415 DNAJC5BQ9UF47 199 aa24.6■■□□□ 1.53
LAT-213ENST00000566415 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
LAT-213ENST00000566415 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
LAT-213ENST00000566415 EIF4G1Q04637 1599 aaKnown RBP24.15■■□□□ 1.46
LAT-213ENST00000566415 CC2D2AQ9P2K1 1620 aa24.12■■□□□ 1.45
LAT-213ENST00000566415 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
LAT-213ENST00000566415 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
LAT-213ENST00000566415 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
LAT-213ENST00000566415 BAZ1AQ9NRL2 1556 aaPredicted RBP23.46■■□□□ 1.35
LAT-213ENST00000566415 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
LAT-213ENST00000566415 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
LAT-213ENST00000566415 HMGXB3Q12766 1538 aa23.36■■□□□ 1.33
LAT-213ENST00000566415 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
LAT-213ENST00000566415 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
LAT-213ENST00000566415 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
LAT-213ENST00000566415 WIZO95785 1651 aa23.06■■□□□ 1.28
LAT-213ENST00000566415 RSF1Q96T23 1441 aaPredicted RBP22.96■■□□□ 1.27
LAT-213ENST00000566415 NESP48681 1621 aa22.94■■□□□ 1.26
LAT-213ENST00000566415 LAMC3Q9Y6N6 1575 aa22.94■■□□□ 1.26
LAT-213ENST00000566415 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
LAT-213ENST00000566415 CUX2O14529 1486 aa22.84■■□□□ 1.25
LAT-213ENST00000566415 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
LAT-213ENST00000566415 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
LAT-213ENST00000566415 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
LAT-213ENST00000566415 CADPSQ9ULU8 1353 aa22.73■■□□□ 1.23
LAT-213ENST00000566415 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
LAT-213ENST00000566415 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
LAT-213ENST00000566415 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
LAT-213ENST00000566415 CFTRP13569 1480 aa22.58■■□□□ 1.2
LAT-213ENST00000566415 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
LAT-213ENST00000566415 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
LAT-213ENST00000566415 WDR62O43379 1518 aa22.48■■□□□ 1.19
LAT-213ENST00000566415 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
LAT-213ENST00000566415 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
LAT-213ENST00000566415 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
LAT-213ENST00000566415 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
LAT-213ENST00000566415 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
LAT-213ENST00000566415 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
LAT-213ENST00000566415 DNMBPQ6XZF7 1577 aa22.09■■□□□ 1.13
LAT-213ENST00000566415 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
LAT-213ENST00000566415 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
LAT-213ENST00000566415 ZNF608Q9ULD9 1512 aaPredicted RBP21.92■■□□□ 1.1
LAT-213ENST00000566415 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
LAT-213ENST00000566415 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
LAT-213ENST00000566415 CUX1P39880 1505 aa21.85■■□□□ 1.09
LAT-213ENST00000566415 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
LAT-213ENST00000566415 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
LAT-213ENST00000566415 OSCARQ8IYS5 282 aa21.78■■□□□ 1.08
LAT-213ENST00000566415 SOGA1O94964 1423 aa21.77■■□□□ 1.08
LAT-213ENST00000566415 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
LAT-213ENST00000566415 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.07
LAT-213ENST00000566415 CHD1O14646 1710 aa21.74■■□□□ 1.07
LAT-213ENST00000566415 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
LAT-213ENST00000566415 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
LAT-213ENST00000566415 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
LAT-213ENST00000566415 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
LAT-213ENST00000566415 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
LAT-213ENST00000566415 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
LAT-213ENST00000566415 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
LAT-213ENST00000566415 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
LAT-213ENST00000566415 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
LAT-213ENST00000566415 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
LAT-213ENST00000566415 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
LAT-213ENST00000566415 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
LAT-213ENST00000566415 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
LAT-213ENST00000566415 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
LAT-213ENST00000566415 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
LAT-213ENST00000566415 FBLN2P98095 1184 aa21.48■■□□□ 1.03
LAT-213ENST00000566415 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
LAT-213ENST00000566415 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
LAT-213ENST00000566415 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
LAT-213ENST00000566415 CLASP1Q7Z460 1538 aa21.43■■□□□ 1.02
LAT-213ENST00000566415 CHMP7Q8WUX9 453 aaPredicted RBP21.42■■□□□ 1.02
LAT-213ENST00000566415 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
LAT-213ENST00000566415 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
LAT-213ENST00000566415 GRIN2AQ12879 1464 aa21.3■■□□□ 1
LAT-213ENST00000566415 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
LAT-213ENST00000566415 ARAP1Q96P48 1450 aa21.27■■□□□ 1
LAT-213ENST00000566415 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
LAT-213ENST00000566415 NUP160Q12769 1436 aa21.22■□□□□ 0.99
LAT-213ENST00000566415 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
LAT-213ENST00000566415 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
LAT-213ENST00000566415 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
LAT-213ENST00000566415 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
LAT-213ENST00000566415 CUL7Q14999 1698 aa21.16■□□□□ 0.98
LAT-213ENST00000566415 IGF1RP08069 1367 aa21.09■□□□□ 0.97
LAT-213ENST00000566415 ERCC6L2Q5T890 1561 aa21.07■□□□□ 0.96
LAT-213ENST00000566415 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms