RNA–Protein interactions for RNA: ENST00000566327.5

SNAP23-213, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-213ENST00000566327 NISCHQ9Y2I1 1504 aa48.07■■■■■ 5.29
SNAP23-213ENST00000566327 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
SNAP23-213ENST00000566327 ABCC9O60706 1549 aa42.05■■■■■ 4.32
SNAP23-213ENST00000566327 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.09
SNAP23-213ENST00000566327 NACADO15069 1562 aa40.46■■■■■ 4.07
SNAP23-213ENST00000566327 MYO15BQ96JP2 1530 aa40.17■■■■■ 4.02
SNAP23-213ENST00000566327 DCAF8L2P0C7V8 631 aa40.15■■■■■ 4.02
SNAP23-213ENST00000566327 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
SNAP23-213ENST00000566327 DCAF1Q9Y4B6 1507 aa39.88■■■■□ 3.97
SNAP23-213ENST00000566327 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
SNAP23-213ENST00000566327 BICRAQ9NZM4 1560 aa39.15■■■■□ 3.86
SNAP23-213ENST00000566327 PABPN1Q86U42 306 aaKnown RBP eCLIP39.14■■■■□ 3.86
SNAP23-213ENST00000566327 SCRIBQ14160 1630 aa39.04■■■■□ 3.84
SNAP23-213ENST00000566327 SHROOM4Q9ULL8 1493 aa39.02■■■■□ 3.84
SNAP23-213ENST00000566327 DNAJC5BQ9UF47 199 aa38.59■■■■□ 3.77
SNAP23-213ENST00000566327 EIF4G1Q04637 1599 aaKnown RBP38.23■■■■□ 3.71
SNAP23-213ENST00000566327 CC2D2AQ9P2K1 1620 aa38.12■■■■□ 3.69
SNAP23-213ENST00000566327 CECR2Q9BXF3 1484 aa37.88■■■■□ 3.65
SNAP23-213ENST00000566327 SMARCA4P51532 1647 aa37.39■■■■□ 3.58
SNAP23-213ENST00000566327 BAZ1AQ9NRL2 1556 aaPredicted RBP37.38■■■■□ 3.57
SNAP23-213ENST00000566327 SMARCA2P51531 1590 aa37.28■■■■□ 3.56
SNAP23-213ENST00000566327 NCAPD3P42695 1498 aa37.23■■■■□ 3.55
SNAP23-213ENST00000566327 ATAD2BQ9ULI0 1458 aa37.17■■■■□ 3.54
SNAP23-213ENST00000566327 HMGXB3Q12766 1538 aa37.11■■■■□ 3.53
SNAP23-213ENST00000566327 PEG3Q9GZU2 1588 aa37.06■■■■□ 3.52
SNAP23-213ENST00000566327 MROH2BQ7Z745 1585 aa36.94■■■■□ 3.5
SNAP23-213ENST00000566327 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
SNAP23-213ENST00000566327 WIZO95785 1651 aa36.59■■■■□ 3.45
SNAP23-213ENST00000566327 RSF1Q96T23 1441 aaPredicted RBP36.44■■■■□ 3.42
SNAP23-213ENST00000566327 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
SNAP23-213ENST00000566327 LAMC3Q9Y6N6 1575 aa36.4■■■■□ 3.42
SNAP23-213ENST00000566327 TOP2AP11388 1531 aaKnown RBP36.27■■■■□ 3.4
SNAP23-213ENST00000566327 NESP48681 1621 aa36.26■■■■□ 3.39
SNAP23-213ENST00000566327 CUX2O14529 1486 aa36.16■■■■□ 3.38
SNAP23-213ENST00000566327 PDS5BQ9NTI5 1447 aa36.14■■■■□ 3.38
SNAP23-213ENST00000566327 CADPSQ9ULU8 1353 aa36.12■■■■□ 3.37
SNAP23-213ENST00000566327 KIF21AQ7Z4S6 1674 aa36■■■■□ 3.35
SNAP23-213ENST00000566327 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
SNAP23-213ENST00000566327 CFTRP13569 1480 aa35.86■■■■□ 3.33
SNAP23-213ENST00000566327 PRDM2Q13029 1718 aa35.81■■■■□ 3.32
SNAP23-213ENST00000566327 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
SNAP23-213ENST00000566327 CCDC88BA6NC98 1476 aa35.73■■■■□ 3.31
SNAP23-213ENST00000566327 MRC2Q9UBG0 1479 aa35.73■■■■□ 3.31
SNAP23-213ENST00000566327 FANCD2Q9BXW9 1451 aa35.71■■■■□ 3.31
SNAP23-213ENST00000566327 WDR62O43379 1518 aa35.61■■■■□ 3.29
SNAP23-213ENST00000566327 SUPT5HO00267 1087 aaKnown RBP35.3■■■■□ 3.24
SNAP23-213ENST00000566327 URB2Q14146 1524 aaKnown RBP35.29■■■■□ 3.24
SNAP23-213ENST00000566327 ABCC8Q09428 1581 aa35.28■■■■□ 3.24
SNAP23-213ENST00000566327 DNAJC5Q9H3Z4 198 aa35.16■■■■□ 3.22
SNAP23-213ENST00000566327 DNMBPQ6XZF7 1577 aa35.12■■■■□ 3.21
SNAP23-213ENST00000566327 TOPBP1Q92547 1522 aa35.11■■■■□ 3.21
SNAP23-213ENST00000566327 IFT140Q96RY7 1462 aa35.02■■■■□ 3.2
SNAP23-213ENST00000566327 POLA1P09884 1462 aaPredicted RBP34.78■■■■□ 3.16
SNAP23-213ENST00000566327 TARBP1Q13395 1621 aaKnown RBP34.75■■■■□ 3.15
SNAP23-213ENST00000566327 EIF4G3O43432 1585 aaKnown RBP34.7■■■■□ 3.15
SNAP23-213ENST00000566327 CUX1P39880 1505 aa34.7■■■■□ 3.14
SNAP23-213ENST00000566327 ZNF608Q9ULD9 1512 aaPredicted RBP34.69■■■■□ 3.14
SNAP23-213ENST00000566327 WDR97A6NE52 1622 aa34.69■■■■□ 3.14
SNAP23-213ENST00000566327 FGD5Q6ZNL6 1462 aa34.66■■■■□ 3.14
SNAP23-213ENST00000566327 SOGA1O94964 1423 aa34.64■■■■□ 3.14
SNAP23-213ENST00000566327 OSCARQ8IYS5 282 aa34.54■■■■□ 3.12
SNAP23-213ENST00000566327 RAD54L2Q9Y4B4 1467 aa34.53■■■■□ 3.12
SNAP23-213ENST00000566327 AQRO60306 1485 aaKnown RBP eCLIP34.49■■■■□ 3.11
SNAP23-213ENST00000566327 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
SNAP23-213ENST00000566327 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
SNAP23-213ENST00000566327 TOP2BQ02880 1626 aa34.46■■■■□ 3.11
SNAP23-213ENST00000566327 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
SNAP23-213ENST00000566327 ABCA10Q8WWZ4 1543 aa34.37■■■■□ 3.09
SNAP23-213ENST00000566327 CHD1O14646 1710 aa34.34■■■■□ 3.09
SNAP23-213ENST00000566327 GRIN2BQ13224 1484 aa34.33■■■■□ 3.09
SNAP23-213ENST00000566327 SYNJ1O43426 1573 aa34.32■■■■□ 3.09
SNAP23-213ENST00000566327 MAGI1Q96QZ7 1491 aaPredicted RBP34.31■■■■□ 3.08
SNAP23-213ENST00000566327 PBRM1Q86U86 1689 aa34.31■■■■□ 3.08
SNAP23-213ENST00000566327 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
SNAP23-213ENST00000566327 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
SNAP23-213ENST00000566327 SNAPC4Q5SXM2 1469 aa34.24■■■■□ 3.07
SNAP23-213ENST00000566327 FBLN2P98095 1184 aa34.18■■■■□ 3.06
SNAP23-213ENST00000566327 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
SNAP23-213ENST00000566327 CHMP7Q8WUX9 453 aaPredicted RBP34.11■■■■□ 3.05
SNAP23-213ENST00000566327 ERICH3Q5RHP9 1530 aa34.02■■■■□ 3.04
SNAP23-213ENST00000566327 RIMBP3CA6NJZ7 1639 aa34■■■■□ 3.03
SNAP23-213ENST00000566327 RIMBP3BA6NNM3 1639 aa34■■■■□ 3.03
SNAP23-213ENST00000566327 RIMBP3Q9UFD9 1639 aa34■■■■□ 3.03
SNAP23-213ENST00000566327 ARHGEF11O15085 1522 aa33.95■■■■□ 3.03
SNAP23-213ENST00000566327 ADAMTS12P58397 1594 aa33.94■■■■□ 3.02
SNAP23-213ENST00000566327 CLASP1Q7Z460 1538 aa33.9■■■■□ 3.02
SNAP23-213ENST00000566327 FHAD1B1AJZ9 1412 aa33.89■■■■□ 3.02
SNAP23-213ENST00000566327 TRIM41Q8WV44 630 aa33.86■■■■□ 3.01
SNAP23-213ENST00000566327 GRIN2AQ12879 1464 aa33.85■■■■□ 3.01
SNAP23-213ENST00000566327 KIF27Q86VH2 1401 aa33.81■■■■□ 3
SNAP23-213ENST00000566327 CUL7Q14999 1698 aa33.73■■■□□ 2.99
SNAP23-213ENST00000566327 NUP160Q12769 1436 aa33.69■■■□□ 2.98
SNAP23-213ENST00000566327 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
SNAP23-213ENST00000566327 ARAP1Q96P48 1450 aa33.61■■■□□ 2.97
SNAP23-213ENST00000566327 CYB5RLQ6IPT4 315 aa33.58■■■□□ 2.97
SNAP23-213ENST00000566327 IGF1RP08069 1367 aa33.56■■■□□ 2.96
SNAP23-213ENST00000566327 SHROOM2Q13796 1616 aa33.53■■■□□ 2.96
SNAP23-213ENST00000566327 RUSC2Q8N2Y8 1516 aa33.45■■■□□ 2.95
SNAP23-213ENST00000566327 CARMIL1Q5VZK9 1371 aa33.43■■■□□ 2.94
SNAP23-213ENST00000566327 KIAA0586Q9BVV6 1533 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms