RNA–Protein interactions for RNA: ENST00000566074.5

HACD3-207, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-207ENST00000566074 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
HACD3-207ENST00000566074 CCDC180Q9P1Z9 1646 aa26.52■■□□□ 1.84
HACD3-207ENST00000566074 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.66
HACD3-207ENST00000566074 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
HACD3-207ENST00000566074 ABCC9O60706 1549 aa25.11■■□□□ 1.61
HACD3-207ENST00000566074 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
HACD3-207ENST00000566074 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
HACD3-207ENST00000566074 NACADO15069 1562 aa24.76■■□□□ 1.55
HACD3-207ENST00000566074 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
HACD3-207ENST00000566074 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
HACD3-207ENST00000566074 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
HACD3-207ENST00000566074 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
HACD3-207ENST00000566074 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
HACD3-207ENST00000566074 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
HACD3-207ENST00000566074 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
HACD3-207ENST00000566074 SUPT5HO00267 1087 aaKnown RBP23.44■■□□□ 1.34
HACD3-207ENST00000566074 CECR2Q9BXF3 1484 aa23.44■■□□□ 1.34
HACD3-207ENST00000566074 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
HACD3-207ENST00000566074 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
HACD3-207ENST00000566074 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
HACD3-207ENST00000566074 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
HACD3-207ENST00000566074 WIZO95785 1651 aa23.08■■□□□ 1.29
HACD3-207ENST00000566074 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.28
HACD3-207ENST00000566074 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
HACD3-207ENST00000566074 SMARCA2P51531 1590 aa23■■□□□ 1.27
HACD3-207ENST00000566074 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
HACD3-207ENST00000566074 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
HACD3-207ENST00000566074 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
HACD3-207ENST00000566074 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
HACD3-207ENST00000566074 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.24
HACD3-207ENST00000566074 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
HACD3-207ENST00000566074 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
HACD3-207ENST00000566074 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
HACD3-207ENST00000566074 CFTRP13569 1480 aa22.27■■□□□ 1.15
HACD3-207ENST00000566074 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
HACD3-207ENST00000566074 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
HACD3-207ENST00000566074 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
HACD3-207ENST00000566074 PRDM2Q13029 1718 aa22.1■■□□□ 1.13
HACD3-207ENST00000566074 LAMC3Q9Y6N6 1575 aa22.09■■□□□ 1.13
HACD3-207ENST00000566074 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
HACD3-207ENST00000566074 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
HACD3-207ENST00000566074 NESP48681 1621 aa21.95■■□□□ 1.11
HACD3-207ENST00000566074 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
HACD3-207ENST00000566074 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
HACD3-207ENST00000566074 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
HACD3-207ENST00000566074 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
HACD3-207ENST00000566074 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
HACD3-207ENST00000566074 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
HACD3-207ENST00000566074 CUX1P39880 1505 aa21.82■■□□□ 1.08
HACD3-207ENST00000566074 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
HACD3-207ENST00000566074 EEA1Q15075 1411 aa21.73■■□□□ 1.07
HACD3-207ENST00000566074 KIF21AQ7Z4S6 1674 aa21.7■■□□□ 1.07
HACD3-207ENST00000566074 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
HACD3-207ENST00000566074 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
HACD3-207ENST00000566074 SOGA1O94964 1423 aa21.64■■□□□ 1.05
HACD3-207ENST00000566074 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
HACD3-207ENST00000566074 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
HACD3-207ENST00000566074 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
HACD3-207ENST00000566074 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
HACD3-207ENST00000566074 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
HACD3-207ENST00000566074 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
HACD3-207ENST00000566074 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
HACD3-207ENST00000566074 WDR62O43379 1518 aa21.52■■□□□ 1.04
HACD3-207ENST00000566074 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
HACD3-207ENST00000566074 ABCA10Q8WWZ4 1543 aa21.48■■□□□ 1.03
HACD3-207ENST00000566074 CUX2O14529 1486 aa21.46■■□□□ 1.03
HACD3-207ENST00000566074 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
HACD3-207ENST00000566074 LOC105371045A0A1W2PR82 267 aa21.44■■□□□ 1.02
HACD3-207ENST00000566074 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
HACD3-207ENST00000566074 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
HACD3-207ENST00000566074 KIF21BO75037 1637 aa21.37■■□□□ 1.01
HACD3-207ENST00000566074 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
HACD3-207ENST00000566074 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
HACD3-207ENST00000566074 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
HACD3-207ENST00000566074 PRXQ9BXM0 1461 aa21.32■■□□□ 1
HACD3-207ENST00000566074 IGF1RP08069 1367 aa21.32■■□□□ 1
HACD3-207ENST00000566074 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
HACD3-207ENST00000566074 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
HACD3-207ENST00000566074 GAPVD1Q14C86 1478 aa21.27■■□□□ 1
HACD3-207ENST00000566074 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
HACD3-207ENST00000566074 TNIKQ9UKE5 1360 aa21.25■□□□□ 0.99
HACD3-207ENST00000566074 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
HACD3-207ENST00000566074 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
HACD3-207ENST00000566074 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
HACD3-207ENST00000566074 CUL7Q14999 1698 aa21.21■□□□□ 0.99
HACD3-207ENST00000566074 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
HACD3-207ENST00000566074 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
HACD3-207ENST00000566074 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.981e-6■■■■□ 21.8
HACD3-207ENST00000566074 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
HACD3-207ENST00000566074 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
HACD3-207ENST00000566074 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
HACD3-207ENST00000566074 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
HACD3-207ENST00000566074 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
HACD3-207ENST00000566074 ADAMTS12P58397 1594 aa21.02■□□□□ 0.96
HACD3-207ENST00000566074 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
HACD3-207ENST00000566074 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
HACD3-207ENST00000566074 CLIP1P30622 1438 aa20.97■□□□□ 0.95
HACD3-207ENST00000566074 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
HACD3-207ENST00000566074 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
HACD3-207ENST00000566074 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms