RNA–Protein interactions for RNA: ENST00000565996.1

HIRIP3-205, Transcript of HIRA interacting protein 3, humanhuman

TSL 2

Gene HIRIP3, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3-205ENST00000565996 NISCHQ9Y2I1 1504 aa22.59■■□□□ 1.21
HIRIP3-205ENST00000565996 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
HIRIP3-205ENST00000565996 ABCC9O60706 1549 aa19.61■□□□□ 0.73
HIRIP3-205ENST00000565996 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
HIRIP3-205ENST00000565996 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.62
HIRIP3-205ENST00000565996 NACADO15069 1562 aa18.87■□□□□ 0.61
HIRIP3-205ENST00000565996 ZCCHC6Q5VYS8 1495 aaKnown RBP18.83■□□□□ 0.6
HIRIP3-205ENST00000565996 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
HIRIP3-205ENST00000565996 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
HIRIP3-205ENST00000565996 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
HIRIP3-205ENST00000565996 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
HIRIP3-205ENST00000565996 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
HIRIP3-205ENST00000565996 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
HIRIP3-205ENST00000565996 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
HIRIP3-205ENST00000565996 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
HIRIP3-205ENST00000565996 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
HIRIP3-205ENST00000565996 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
HIRIP3-205ENST00000565996 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
HIRIP3-205ENST00000565996 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
HIRIP3-205ENST00000565996 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
HIRIP3-205ENST00000565996 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
HIRIP3-205ENST00000565996 MROH2BQ7Z745 1585 aa17.41■□□□□ 0.38
HIRIP3-205ENST00000565996 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
HIRIP3-205ENST00000565996 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
HIRIP3-205ENST00000565996 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.37
HIRIP3-205ENST00000565996 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
HIRIP3-205ENST00000565996 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
HIRIP3-205ENST00000565996 WIZO95785 1651 aa17.23■□□□□ 0.35
HIRIP3-205ENST00000565996 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
HIRIP3-205ENST00000565996 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
HIRIP3-205ENST00000565996 NESP48681 1621 aa16.97■□□□□ 0.31
HIRIP3-205ENST00000565996 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
HIRIP3-205ENST00000565996 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
HIRIP3-205ENST00000565996 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.3
HIRIP3-205ENST00000565996 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
HIRIP3-205ENST00000565996 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
HIRIP3-205ENST00000565996 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
HIRIP3-205ENST00000565996 CFTRP13569 1480 aa16.8■□□□□ 0.28
HIRIP3-205ENST00000565996 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
HIRIP3-205ENST00000565996 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
HIRIP3-205ENST00000565996 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
HIRIP3-205ENST00000565996 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
HIRIP3-205ENST00000565996 CUX2O14529 1486 aa16.7■□□□□ 0.26
HIRIP3-205ENST00000565996 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
HIRIP3-205ENST00000565996 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
HIRIP3-205ENST00000565996 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
HIRIP3-205ENST00000565996 WDR62O43379 1518 aa16.59■□□□□ 0.25
HIRIP3-205ENST00000565996 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
HIRIP3-205ENST00000565996 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
HIRIP3-205ENST00000565996 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
HIRIP3-205ENST00000565996 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
HIRIP3-205ENST00000565996 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
HIRIP3-205ENST00000565996 CUX1P39880 1505 aa16.34■□□□□ 0.21
HIRIP3-205ENST00000565996 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
HIRIP3-205ENST00000565996 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
HIRIP3-205ENST00000565996 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
HIRIP3-205ENST00000565996 ZNF608Q9ULD9 1512 aaPredicted RBP16.25■□□□□ 0.19
HIRIP3-205ENST00000565996 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
HIRIP3-205ENST00000565996 SOGA1O94964 1423 aa16.25■□□□□ 0.19
HIRIP3-205ENST00000565996 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
HIRIP3-205ENST00000565996 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
HIRIP3-205ENST00000565996 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
HIRIP3-205ENST00000565996 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
HIRIP3-205ENST00000565996 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
HIRIP3-205ENST00000565996 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.189e-10■■■■□ 21
HIRIP3-205ENST00000565996 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
HIRIP3-205ENST00000565996 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
HIRIP3-205ENST00000565996 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
HIRIP3-205ENST00000565996 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
HIRIP3-205ENST00000565996 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
HIRIP3-205ENST00000565996 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
HIRIP3-205ENST00000565996 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
HIRIP3-205ENST00000565996 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
HIRIP3-205ENST00000565996 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
HIRIP3-205ENST00000565996 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.15
HIRIP3-205ENST00000565996 FBLN2P98095 1184 aa16.01■□□□□ 0.15
HIRIP3-205ENST00000565996 CHD1O14646 1710 aa15.99■□□□□ 0.15
HIRIP3-205ENST00000565996 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
HIRIP3-205ENST00000565996 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
HIRIP3-205ENST00000565996 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
HIRIP3-205ENST00000565996 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
HIRIP3-205ENST00000565996 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
HIRIP3-205ENST00000565996 ADAMTS12P58397 1594 aa15.91■□□□□ 0.14
HIRIP3-205ENST00000565996 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
HIRIP3-205ENST00000565996 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
HIRIP3-205ENST00000565996 IGF1RP08069 1367 aa15.82■□□□□ 0.12
HIRIP3-205ENST00000565996 CUL7Q14999 1698 aa15.82■□□□□ 0.12
HIRIP3-205ENST00000565996 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
HIRIP3-205ENST00000565996 NUP160Q12769 1436 aa15.77■□□□□ 0.11
HIRIP3-205ENST00000565996 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
HIRIP3-205ENST00000565996 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
HIRIP3-205ENST00000565996 RUSC2Q8N2Y8 1516 aa15.76■□□□□ 0.11
HIRIP3-205ENST00000565996 RIMBP3CA6NJZ7 1639 aa15.76■□□□□ 0.11
HIRIP3-205ENST00000565996 RIMBP3BA6NNM3 1639 aa15.76■□□□□ 0.11
HIRIP3-205ENST00000565996 RIMBP3Q9UFD9 1639 aa15.76■□□□□ 0.11
HIRIP3-205ENST00000565996 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
HIRIP3-205ENST00000565996 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
HIRIP3-205ENST00000565996 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
HIRIP3-205ENST00000565996 EEA1Q15075 1411 aa15.65■□□□□ 0.1
HIRIP3-205ENST00000565996 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms