RNA–Protein interactions for RNA: ENST00000565871.1

KIFC3-225, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-225ENST00000565871 NISCHQ9Y2I1 1504 aa35.08■■■■□ 3.21
KIFC3-225ENST00000565871 CCDC180Q9P1Z9 1646 aa30.85■■■□□ 2.53
KIFC3-225ENST00000565871 ABCC9O60706 1549 aa29.92■■■□□ 2.38
KIFC3-225ENST00000565871 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
KIFC3-225ENST00000565871 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
KIFC3-225ENST00000565871 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
KIFC3-225ENST00000565871 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
KIFC3-225ENST00000565871 NACADO15069 1562 aa28.83■■■□□ 2.21
KIFC3-225ENST00000565871 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
KIFC3-225ENST00000565871 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
KIFC3-225ENST00000565871 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
KIFC3-225ENST00000565871 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
KIFC3-225ENST00000565871 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
KIFC3-225ENST00000565871 PABPN1Q86U42 306 aaKnown RBP eCLIP27.87■■■□□ 2.05
KIFC3-225ENST00000565871 BICRAQ9NZM4 1560 aa27.76■■■□□ 2.03
KIFC3-225ENST00000565871 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
KIFC3-225ENST00000565871 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.94
KIFC3-225ENST00000565871 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
KIFC3-225ENST00000565871 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
KIFC3-225ENST00000565871 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
KIFC3-225ENST00000565871 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
KIFC3-225ENST00000565871 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
KIFC3-225ENST00000565871 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
KIFC3-225ENST00000565871 WIZO95785 1651 aa26.82■■□□□ 1.88
KIFC3-225ENST00000565871 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
KIFC3-225ENST00000565871 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
KIFC3-225ENST00000565871 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
KIFC3-225ENST00000565871 NCAPD3P42695 1498 aa26.58■■□□□ 1.85
KIFC3-225ENST00000565871 TOP2AP11388 1531 aaKnown RBP26.57■■□□□ 1.84
KIFC3-225ENST00000565871 DNAJC5Q9H3Z4 198 aa26.57■■□□□ 1.84
KIFC3-225ENST00000565871 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
KIFC3-225ENST00000565871 HMGXB3Q12766 1538 aa26.52■■□□□ 1.84
KIFC3-225ENST00000565871 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
KIFC3-225ENST00000565871 CUX2O14529 1486 aa26.02■■□□□ 1.76
KIFC3-225ENST00000565871 ERCC6Q03468 1493 aa25.93■■□□□ 1.74
KIFC3-225ENST00000565871 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
KIFC3-225ENST00000565871 CFTRP13569 1480 aa25.85■■□□□ 1.73
KIFC3-225ENST00000565871 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
KIFC3-225ENST00000565871 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
KIFC3-225ENST00000565871 NESP48681 1621 aa25.7■■□□□ 1.71
KIFC3-225ENST00000565871 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
KIFC3-225ENST00000565871 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
KIFC3-225ENST00000565871 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
KIFC3-225ENST00000565871 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
KIFC3-225ENST00000565871 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
KIFC3-225ENST00000565871 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
KIFC3-225ENST00000565871 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
KIFC3-225ENST00000565871 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
KIFC3-225ENST00000565871 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
KIFC3-225ENST00000565871 CUX1P39880 1505 aa25.33■■□□□ 1.65
KIFC3-225ENST00000565871 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
KIFC3-225ENST00000565871 BIVM-ERCC5R4GMW8 1640 aa25.32■■□□□ 1.64
KIFC3-225ENST00000565871 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
KIFC3-225ENST00000565871 DNMBPQ6XZF7 1577 aa25.28■■□□□ 1.64
KIFC3-225ENST00000565871 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
KIFC3-225ENST00000565871 URB2Q14146 1524 aaKnown RBP25.25■■□□□ 1.63
KIFC3-225ENST00000565871 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
KIFC3-225ENST00000565871 WDR62O43379 1518 aa25.13■■□□□ 1.61
KIFC3-225ENST00000565871 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
KIFC3-225ENST00000565871 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
KIFC3-225ENST00000565871 SOGA1O94964 1423 aa25.01■■□□□ 1.59
KIFC3-225ENST00000565871 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
KIFC3-225ENST00000565871 EEA1Q15075 1411 aa24.94■■□□□ 1.58
KIFC3-225ENST00000565871 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
KIFC3-225ENST00000565871 IFT140Q96RY7 1462 aa24.89■■□□□ 1.58
KIFC3-225ENST00000565871 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
KIFC3-225ENST00000565871 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
KIFC3-225ENST00000565871 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
KIFC3-225ENST00000565871 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
KIFC3-225ENST00000565871 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
KIFC3-225ENST00000565871 WDR97A6NE52 1622 aa24.88■■□□□ 1.57
KIFC3-225ENST00000565871 CSRNP3Q8WYN3 585 aa24.79■■□□□ 1.56
KIFC3-225ENST00000565871 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
KIFC3-225ENST00000565871 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
KIFC3-225ENST00000565871 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
KIFC3-225ENST00000565871 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
KIFC3-225ENST00000565871 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.54
KIFC3-225ENST00000565871 IGF1RP08069 1367 aa24.67■■□□□ 1.54
KIFC3-225ENST00000565871 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.53
KIFC3-225ENST00000565871 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
KIFC3-225ENST00000565871 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
KIFC3-225ENST00000565871 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
KIFC3-225ENST00000565871 KIF21BO75037 1637 aa24.61■■□□□ 1.53
KIFC3-225ENST00000565871 PRXQ9BXM0 1461 aa24.58■■□□□ 1.53
KIFC3-225ENST00000565871 CUL7Q14999 1698 aa24.58■■□□□ 1.53
KIFC3-225ENST00000565871 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
KIFC3-225ENST00000565871 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
KIFC3-225ENST00000565871 GOLGA3Q08378 1498 aa24.53■■□□□ 1.52
KIFC3-225ENST00000565871 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
KIFC3-225ENST00000565871 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
KIFC3-225ENST00000565871 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
KIFC3-225ENST00000565871 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
KIFC3-225ENST00000565871 FHAD1B1AJZ9 1412 aa24.46■■□□□ 1.51
KIFC3-225ENST00000565871 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
KIFC3-225ENST00000565871 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
KIFC3-225ENST00000565871 TNIKQ9UKE5 1360 aa24.38■■□□□ 1.49
KIFC3-225ENST00000565871 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
KIFC3-225ENST00000565871 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
KIFC3-225ENST00000565871 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
KIFC3-225ENST00000565871 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms