RNA–Protein interactions for RNA: ENST00000565870.5

RNPS1-217, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 1 (best)

Gene RNPS1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-217ENST00000565870 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
RNPS1-217ENST00000565870 CCDC180Q9P1Z9 1646 aa36.75■■■■□ 3.47
RNPS1-217ENST00000565870 ABCC9O60706 1549 aa35.31■■■■□ 3.24
RNPS1-217ENST00000565870 ZCCHC6Q5VYS8 1495 aaKnown RBP34.92■■■■□ 3.18
RNPS1-217ENST00000565870 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
RNPS1-217ENST00000565870 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
RNPS1-217ENST00000565870 MYO15BQ96JP2 1530 aa34.5■■■■□ 3.11
RNPS1-217ENST00000565870 NACADO15069 1562 aa34.43■■■■□ 3.1
RNPS1-217ENST00000565870 RB1CC1Q8TDY2 1594 aa34.26■■■■□ 3.08
RNPS1-217ENST00000565870 SCRIBQ14160 1630 aa33.58■■■□□ 2.97
RNPS1-217ENST00000565870 UNC13AQ9UPW8 1703 aa33.52■■■□□ 2.96
RNPS1-217ENST00000565870 SHROOM4Q9ULL8 1493 aa33.42■■■□□ 2.94
RNPS1-217ENST00000565870 BICRAQ9NZM4 1560 aa33.27■■■□□ 2.92
RNPS1-217ENST00000565870 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.91
RNPS1-217ENST00000565870 CECR2Q9BXF3 1484 aa32.5■■■□□ 2.79
RNPS1-217ENST00000565870 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
RNPS1-217ENST00000565870 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
RNPS1-217ENST00000565870 MROH2BQ7Z745 1585 aa32.22■■■□□ 2.75
RNPS1-217ENST00000565870 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
RNPS1-217ENST00000565870 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
RNPS1-217ENST00000565870 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
RNPS1-217ENST00000565870 PEG3Q9GZU2 1588 aa31.93■■■□□ 2.7
RNPS1-217ENST00000565870 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
RNPS1-217ENST00000565870 DNAJC5BQ9UF47 199 aa31.92■■■□□ 2.7
RNPS1-217ENST00000565870 WIZO95785 1651 aa31.88■■■□□ 2.69
RNPS1-217ENST00000565870 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
RNPS1-217ENST00000565870 SMARCA2P51531 1590 aa31.86■■■□□ 2.69
RNPS1-217ENST00000565870 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
RNPS1-217ENST00000565870 HMGXB3Q12766 1538 aa31.64■■■□□ 2.66
RNPS1-217ENST00000565870 BAZ1BQ9UIG0 1483 aaKnown RBP31.64■■■□□ 2.66
RNPS1-217ENST00000565870 TOP2AP11388 1531 aaKnown RBP31.55■■■□□ 2.64
RNPS1-217ENST00000565870 CCDC88BA6NC98 1476 aa31.26■■■□□ 2.6
RNPS1-217ENST00000565870 CADPSQ9ULU8 1353 aa30.93■■■□□ 2.54
RNPS1-217ENST00000565870 CFTRP13569 1480 aa30.88■■■□□ 2.53
RNPS1-217ENST00000565870 NESP48681 1621 aa30.8■■■□□ 2.52
RNPS1-217ENST00000565870 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
RNPS1-217ENST00000565870 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
RNPS1-217ENST00000565870 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
RNPS1-217ENST00000565870 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.48
RNPS1-217ENST00000565870 KIF21AQ7Z4S6 1674 aa30.4■■■□□ 2.46
RNPS1-217ENST00000565870 CEP164Q9UPV0 1460 aa30.38■■■□□ 2.45
RNPS1-217ENST00000565870 ERCC6Q03468 1493 aa30.33■■■□□ 2.45
RNPS1-217ENST00000565870 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
RNPS1-217ENST00000565870 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
RNPS1-217ENST00000565870 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
RNPS1-217ENST00000565870 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
RNPS1-217ENST00000565870 URB2Q14146 1524 aaKnown RBP30.18■■■□□ 2.42
RNPS1-217ENST00000565870 CUX1P39880 1505 aa30.16■■■□□ 2.42
RNPS1-217ENST00000565870 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
RNPS1-217ENST00000565870 DNMBPQ6XZF7 1577 aa30.11■■■□□ 2.41
RNPS1-217ENST00000565870 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
RNPS1-217ENST00000565870 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
RNPS1-217ENST00000565870 TOP2BQ02880 1626 aa30.08■■■□□ 2.41
RNPS1-217ENST00000565870 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
RNPS1-217ENST00000565870 WDR62O43379 1518 aa30.07■■■□□ 2.4
RNPS1-217ENST00000565870 BIVM-ERCC5R4GMW8 1640 aa30.06■■■□□ 2.4
RNPS1-217ENST00000565870 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
RNPS1-217ENST00000565870 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
RNPS1-217ENST00000565870 CUX2O14529 1486 aa29.85■■■□□ 2.37
RNPS1-217ENST00000565870 SOGA1O94964 1423 aa29.84■■■□□ 2.37
RNPS1-217ENST00000565870 RAD54L2Q9Y4B4 1467 aa29.8■■■□□ 2.36
RNPS1-217ENST00000565870 IFT140Q96RY7 1462 aa29.75■■■□□ 2.35
RNPS1-217ENST00000565870 TARBP1Q13395 1621 aaKnown RBP29.74■■■□□ 2.35
RNPS1-217ENST00000565870 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.35
RNPS1-217ENST00000565870 WDR97A6NE52 1622 aa29.61■■■□□ 2.33
RNPS1-217ENST00000565870 TDRD9Q8NDG6 1382 aaKnown RBP29.59■■■□□ 2.33
RNPS1-217ENST00000565870 ZNF608Q9ULD9 1512 aaPredicted RBP29.57■■■□□ 2.32
RNPS1-217ENST00000565870 RUSC2Q8N2Y8 1516 aa29.56■■■□□ 2.32
RNPS1-217ENST00000565870 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
RNPS1-217ENST00000565870 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.323e-7■■■■□ 22.2
RNPS1-217ENST00000565870 GAPVD1Q14C86 1478 aa29.48■■■□□ 2.31
RNPS1-217ENST00000565870 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
RNPS1-217ENST00000565870 EEA1Q15075 1411 aa29.47■■■□□ 2.31
RNPS1-217ENST00000565870 IGF1RP08069 1367 aa29.43■■■□□ 2.3
RNPS1-217ENST00000565870 FAM9AQ8IZU1 332 aaPredicted RBP29.42■■■□□ 2.3
RNPS1-217ENST00000565870 CSRNP3Q8WYN3 585 aa29.41■■■□□ 2.3
RNPS1-217ENST00000565870 EIF4G3O43432 1585 aaKnown RBP29.4■■■□□ 2.3
RNPS1-217ENST00000565870 GRIN2BQ13224 1484 aa29.36■■■□□ 2.29
RNPS1-217ENST00000565870 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
RNPS1-217ENST00000565870 PBRM1Q86U86 1689 aa29.29■■■□□ 2.28
RNPS1-217ENST00000565870 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
RNPS1-217ENST00000565870 PRXQ9BXM0 1461 aa29.2■■■□□ 2.27
RNPS1-217ENST00000565870 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.26
RNPS1-217ENST00000565870 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
RNPS1-217ENST00000565870 FHAD1B1AJZ9 1412 aa29.17■■■□□ 2.26
RNPS1-217ENST00000565870 CUL7Q14999 1698 aa29.17■■■□□ 2.26
RNPS1-217ENST00000565870 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
RNPS1-217ENST00000565870 RAPGEF2Q9Y4G8 1499 aa29.1■■■□□ 2.25
RNPS1-217ENST00000565870 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
RNPS1-217ENST00000565870 KIF21BO75037 1637 aa29.07■■■□□ 2.24
RNPS1-217ENST00000565870 CHMP7Q8WUX9 453 aaPredicted RBP29.06■■■□□ 2.24
RNPS1-217ENST00000565870 LOC105371045A0A1W2PR82 267 aa29.01■■■□□ 2.23
RNPS1-217ENST00000565870 FBLN2P98095 1184 aa29■■■□□ 2.23
RNPS1-217ENST00000565870 GRIN2AQ12879 1464 aa28.98■■■□□ 2.23
RNPS1-217ENST00000565870 GOLGA3Q08378 1498 aa28.96■■■□□ 2.23
RNPS1-217ENST00000565870 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
RNPS1-217ENST00000565870 CHD1O14646 1710 aa28.91■■■□□ 2.22
RNPS1-217ENST00000565870 UBTFP17480 764 aaKnown RBP28.89■■■□□ 2.21
RNPS1-217ENST00000565870 NUP160Q12769 1436 aa28.85■■■□□ 2.21
RNPS1-217ENST00000565870 TNIKQ9UKE5 1360 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms