RNA–Protein interactions for RNA: ENST00000565372.5

SCAPER-214, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-214ENST00000565372 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
SCAPER-214ENST00000565372 CCDC180Q9P1Z9 1646 aa39.42■■■■□ 3.9
SCAPER-214ENST00000565372 ABCC9O60706 1549 aa38.49■■■■□ 3.75
SCAPER-214ENST00000565372 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.52
SCAPER-214ENST00000565372 NACADO15069 1562 aa37.05■■■■□ 3.52
SCAPER-214ENST00000565372 ZCCHC6Q5VYS8 1495 aaKnown RBP37■■■■□ 3.51
SCAPER-214ENST00000565372 DCAF8L2P0C7V8 631 aa36.96■■■■□ 3.51
SCAPER-214ENST00000565372 MYO15BQ96JP2 1530 aa36.9■■■■□ 3.5
SCAPER-214ENST00000565372 DCAF1Q9Y4B6 1507 aa36.75■■■■□ 3.47
SCAPER-214ENST00000565372 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.38
SCAPER-214ENST00000565372 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
SCAPER-214ENST00000565372 BICRAQ9NZM4 1560 aa35.96■■■■□ 3.35
SCAPER-214ENST00000565372 SCRIBQ14160 1630 aa35.95■■■■□ 3.35
SCAPER-214ENST00000565372 SHROOM4Q9ULL8 1493 aa35.63■■■■□ 3.29
SCAPER-214ENST00000565372 DNAJC5BQ9UF47 199 aa35.28■■■■□ 3.24
SCAPER-214ENST00000565372 EIF4G1Q04637 1599 aaKnown RBP35.01■■■■□ 3.2
SCAPER-214ENST00000565372 CC2D2AQ9P2K1 1620 aa34.83■■■■□ 3.17
SCAPER-214ENST00000565372 CECR2Q9BXF3 1484 aa34.59■■■■□ 3.13
SCAPER-214ENST00000565372 SMARCA4P51532 1647 aa34.41■■■■□ 3.1
SCAPER-214ENST00000565372 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
SCAPER-214ENST00000565372 ATAD2BQ9ULI0 1458 aa34.22■■■■□ 3.07
SCAPER-214ENST00000565372 NCAPD3P42695 1498 aa34.2■■■■□ 3.06
SCAPER-214ENST00000565372 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
SCAPER-214ENST00000565372 SMARCA2P51531 1590 aa34.18■■■■□ 3.06
SCAPER-214ENST00000565372 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
SCAPER-214ENST00000565372 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
SCAPER-214ENST00000565372 BAZ1BQ9UIG0 1483 aaKnown RBP33.94■■■■□ 3.02
SCAPER-214ENST00000565372 RSF1Q96T23 1441 aaPredicted RBP33.83■■■■□ 3.01
SCAPER-214ENST00000565372 WIZO95785 1651 aa33.8■■■■□ 3
SCAPER-214ENST00000565372 TOP2AP11388 1531 aaKnown RBP33.48■■■□□ 2.95
SCAPER-214ENST00000565372 NESP48681 1621 aa33.34■■■□□ 2.93
SCAPER-214ENST00000565372 LAMC3Q9Y6N6 1575 aa33.28■■■□□ 2.92
SCAPER-214ENST00000565372 CADPSQ9ULU8 1353 aa33.2■■■□□ 2.9
SCAPER-214ENST00000565372 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
SCAPER-214ENST00000565372 CCDC88BA6NC98 1476 aa33.07■■■□□ 2.88
SCAPER-214ENST00000565372 PDS5BQ9NTI5 1447 aa33.05■■■□□ 2.88
SCAPER-214ENST00000565372 CFTRP13569 1480 aa33.03■■■□□ 2.88
SCAPER-214ENST00000565372 SUPT5HO00267 1087 aaKnown RBP32.95■■■□□ 2.87
SCAPER-214ENST00000565372 KIF21AQ7Z4S6 1674 aa32.92■■■□□ 2.86
SCAPER-214ENST00000565372 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
SCAPER-214ENST00000565372 CUX2O14529 1486 aa32.83■■■□□ 2.85
SCAPER-214ENST00000565372 FANCD2Q9BXW9 1451 aa32.81■■■□□ 2.84
SCAPER-214ENST00000565372 CEP164Q9UPV0 1460 aa32.76■■■□□ 2.84
SCAPER-214ENST00000565372 PRDM2Q13029 1718 aa32.73■■■□□ 2.83
SCAPER-214ENST00000565372 MRC2Q9UBG0 1479 aa32.71■■■□□ 2.83
SCAPER-214ENST00000565372 WDR62O43379 1518 aa32.61■■■□□ 2.81
SCAPER-214ENST00000565372 URB2Q14146 1524 aaKnown RBP32.49■■■□□ 2.79
SCAPER-214ENST00000565372 ABCC8Q09428 1581 aa32.29■■■□□ 2.76
SCAPER-214ENST00000565372 TOPBP1Q92547 1522 aa32.29■■■□□ 2.76
SCAPER-214ENST00000565372 DNMBPQ6XZF7 1577 aa32.27■■■□□ 2.76
SCAPER-214ENST00000565372 CUX1P39880 1505 aa32.08■■■□□ 2.73
SCAPER-214ENST00000565372 IFT140Q96RY7 1462 aa32.08■■■□□ 2.73
SCAPER-214ENST00000565372 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
SCAPER-214ENST00000565372 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
SCAPER-214ENST00000565372 TARBP1Q13395 1621 aaKnown RBP31.94■■■□□ 2.7
SCAPER-214ENST00000565372 ZNF608Q9ULD9 1512 aaPredicted RBP31.93■■■□□ 2.7
SCAPER-214ENST00000565372 WRNQ14191 1432 aaPredicted RBP eCLIP31.89■■■□□ 2.7
SCAPER-214ENST00000565372 SOGA1O94964 1423 aa31.88■■■□□ 2.69
SCAPER-214ENST00000565372 RAD54L2Q9Y4B4 1467 aa31.87■■■□□ 2.69
SCAPER-214ENST00000565372 TOP2BQ02880 1626 aa31.82■■■□□ 2.69
SCAPER-214ENST00000565372 SYNJ1O43426 1573 aa31.81■■■□□ 2.68
SCAPER-214ENST00000565372 BIVM-ERCC5R4GMW8 1640 aa31.81■■■□□ 2.68
SCAPER-214ENST00000565372 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
SCAPER-214ENST00000565372 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.67
SCAPER-214ENST00000565372 DNAJC5Q9H3Z4 198 aa31.73■■■□□ 2.67
SCAPER-214ENST00000565372 WDR97A6NE52 1622 aa31.71■■■□□ 2.67
SCAPER-214ENST00000565372 TDRD9Q8NDG6 1382 aaKnown RBP31.69■■■□□ 2.66
SCAPER-214ENST00000565372 ABCA10Q8WWZ4 1543 aa31.66■■■□□ 2.66
SCAPER-214ENST00000565372 ABCA5Q8WWZ7 1642 aa31.53■■■□□ 2.64
SCAPER-214ENST00000565372 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
SCAPER-214ENST00000565372 GRIN2BQ13224 1484 aa31.52■■■□□ 2.64
SCAPER-214ENST00000565372 SNAPC4Q5SXM2 1469 aa31.46■■■□□ 2.63
SCAPER-214ENST00000565372 OSCARQ8IYS5 282 aa31.45■■■□□ 2.63
SCAPER-214ENST00000565372 MAGI1Q96QZ7 1491 aaPredicted RBP31.44■■■□□ 2.62
SCAPER-214ENST00000565372 PBRM1Q86U86 1689 aa31.43■■■□□ 2.62
SCAPER-214ENST00000565372 CHD1O14646 1710 aa31.35■■■□□ 2.61
SCAPER-214ENST00000565372 SYNJ2O15056 1496 aa31.32■■■□□ 2.6
SCAPER-214ENST00000565372 FBLN2P98095 1184 aa31.31■■■□□ 2.6
SCAPER-214ENST00000565372 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
SCAPER-214ENST00000565372 CHMP7Q8WUX9 453 aaPredicted RBP31.26■■■□□ 2.59
SCAPER-214ENST00000565372 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
SCAPER-214ENST00000565372 KIF27Q86VH2 1401 aa31.22■■■□□ 2.59
SCAPER-214ENST00000565372 FHAD1B1AJZ9 1412 aa31.17■■■□□ 2.58
SCAPER-214ENST00000565372 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
SCAPER-214ENST00000565372 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
SCAPER-214ENST00000565372 IGF1RP08069 1367 aa31.09■■■□□ 2.57
SCAPER-214ENST00000565372 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
SCAPER-214ENST00000565372 CUL7Q14999 1698 aa31■■■□□ 2.55
SCAPER-214ENST00000565372 NUP160Q12769 1436 aa30.98■■■□□ 2.55
SCAPER-214ENST00000565372 ARHGEF11O15085 1522 aa30.97■■■□□ 2.55
SCAPER-214ENST00000565372 CEP170Q5SW79 1584 aa30.96■■■□□ 2.55
SCAPER-214ENST00000565372 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.54
SCAPER-214ENST00000565372 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.54
SCAPER-214ENST00000565372 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.54
SCAPER-214ENST00000565372 RUSC2Q8N2Y8 1516 aa30.94■■■□□ 2.54
SCAPER-214ENST00000565372 CARMIL1Q5VZK9 1371 aa30.89■■■□□ 2.54
SCAPER-214ENST00000565372 CHIC1Q5VXU3 224 aa30.81■■■□□ 2.52
SCAPER-214ENST00000565372 SHROOM2Q13796 1616 aa30.74■■■□□ 2.51
SCAPER-214ENST00000565372 ARAP1Q96P48 1450 aa30.73■■■□□ 2.51
SCAPER-214ENST00000565372 RAPGEF2Q9Y4G8 1499 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms