RNA–Protein interactions for RNA: ENST00000565351.5

KIFC3-220, Transcript of kinesin family member C3, humanhuman

TSL 1 (best)

Gene KIFC3, Length 297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-220ENST00000565351 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
KIFC3-220ENST00000565351 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
KIFC3-220ENST00000565351 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
KIFC3-220ENST00000565351 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
KIFC3-220ENST00000565351 ABCC9O60706 1549 aa23.37■■□□□ 1.33
KIFC3-220ENST00000565351 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.33
KIFC3-220ENST00000565351 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
KIFC3-220ENST00000565351 NACADO15069 1562 aa23.11■■□□□ 1.29
KIFC3-220ENST00000565351 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
KIFC3-220ENST00000565351 SHROOM4Q9ULL8 1493 aa22.64■■□□□ 1.21
KIFC3-220ENST00000565351 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
KIFC3-220ENST00000565351 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
KIFC3-220ENST00000565351 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
KIFC3-220ENST00000565351 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
KIFC3-220ENST00000565351 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
KIFC3-220ENST00000565351 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
KIFC3-220ENST00000565351 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
KIFC3-220ENST00000565351 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
KIFC3-220ENST00000565351 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
KIFC3-220ENST00000565351 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
KIFC3-220ENST00000565351 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
KIFC3-220ENST00000565351 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
KIFC3-220ENST00000565351 WIZO95785 1651 aa21.53■■□□□ 1.04
KIFC3-220ENST00000565351 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
KIFC3-220ENST00000565351 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
KIFC3-220ENST00000565351 ATAD2BQ9ULI0 1458 aa21.44■■□□□ 1.02
KIFC3-220ENST00000565351 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
KIFC3-220ENST00000565351 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
KIFC3-220ENST00000565351 HMGXB3Q12766 1538 aa21.29■■□□□ 1
KIFC3-220ENST00000565351 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
KIFC3-220ENST00000565351 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
KIFC3-220ENST00000565351 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
KIFC3-220ENST00000565351 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
KIFC3-220ENST00000565351 CFTRP13569 1480 aa20.8■□□□□ 0.92
KIFC3-220ENST00000565351 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
KIFC3-220ENST00000565351 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
KIFC3-220ENST00000565351 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
KIFC3-220ENST00000565351 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
KIFC3-220ENST00000565351 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
KIFC3-220ENST00000565351 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
KIFC3-220ENST00000565351 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
KIFC3-220ENST00000565351 NESP48681 1621 aa20.48■□□□□ 0.87
KIFC3-220ENST00000565351 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
KIFC3-220ENST00000565351 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
KIFC3-220ENST00000565351 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
KIFC3-220ENST00000565351 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
KIFC3-220ENST00000565351 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
KIFC3-220ENST00000565351 CUX1P39880 1505 aa20.37■□□□□ 0.85
KIFC3-220ENST00000565351 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
KIFC3-220ENST00000565351 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
KIFC3-220ENST00000565351 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
KIFC3-220ENST00000565351 EEA1Q15075 1411 aa20.24■□□□□ 0.83
KIFC3-220ENST00000565351 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
KIFC3-220ENST00000565351 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
KIFC3-220ENST00000565351 SOGA1O94964 1423 aa20.17■□□□□ 0.82
KIFC3-220ENST00000565351 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
KIFC3-220ENST00000565351 FGD5Q6ZNL6 1462 aa20.15■□□□□ 0.82
KIFC3-220ENST00000565351 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
KIFC3-220ENST00000565351 WDR62O43379 1518 aa20.09■□□□□ 0.81
KIFC3-220ENST00000565351 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
KIFC3-220ENST00000565351 ERCC6Q03468 1493 aa20.06■□□□□ 0.8
KIFC3-220ENST00000565351 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
KIFC3-220ENST00000565351 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
KIFC3-220ENST00000565351 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
KIFC3-220ENST00000565351 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
KIFC3-220ENST00000565351 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.8
KIFC3-220ENST00000565351 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
KIFC3-220ENST00000565351 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
KIFC3-220ENST00000565351 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
KIFC3-220ENST00000565351 CUX2O14529 1486 aa19.97■□□□□ 0.79
KIFC3-220ENST00000565351 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
KIFC3-220ENST00000565351 KIF21BO75037 1637 aa19.94■□□□□ 0.78
KIFC3-220ENST00000565351 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
KIFC3-220ENST00000565351 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
KIFC3-220ENST00000565351 IGF1RP08069 1367 aa19.91■□□□□ 0.78
KIFC3-220ENST00000565351 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
KIFC3-220ENST00000565351 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
KIFC3-220ENST00000565351 GOLGA3Q08378 1498 aa19.86■□□□□ 0.77
KIFC3-220ENST00000565351 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
KIFC3-220ENST00000565351 TNIKQ9UKE5 1360 aa19.82■□□□□ 0.76
KIFC3-220ENST00000565351 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
KIFC3-220ENST00000565351 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
KIFC3-220ENST00000565351 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
KIFC3-220ENST00000565351 CUL7Q14999 1698 aa19.77■□□□□ 0.76
KIFC3-220ENST00000565351 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
KIFC3-220ENST00000565351 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
KIFC3-220ENST00000565351 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.753e-9■■■■■ 42.8
KIFC3-220ENST00000565351 PBRM1Q86U86 1689 aa19.68■□□□□ 0.74
KIFC3-220ENST00000565351 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
KIFC3-220ENST00000565351 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
KIFC3-220ENST00000565351 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
KIFC3-220ENST00000565351 CEP162Q5TB80 1403 aa19.61■□□□□ 0.73
KIFC3-220ENST00000565351 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
KIFC3-220ENST00000565351 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
KIFC3-220ENST00000565351 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
KIFC3-220ENST00000565351 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
KIFC3-220ENST00000565351 CLIP1P30622 1438 aa19.51■□□□□ 0.71
KIFC3-220ENST00000565351 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
KIFC3-220ENST00000565351 CTTNBP2Q8WZ74 1663 aa19.48■□□□□ 0.71
KIFC3-220ENST00000565351 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms