RNA–Protein interactions for RNA: ENST00000565264.1

SIN3A-206, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-206ENST00000565264 NISCHQ9Y2I1 1504 aa40.76■■■■■ 4.12
SIN3A-206ENST00000565264 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
SIN3A-206ENST00000565264 ABCC9O60706 1549 aa36.38■■■■□ 3.41
SIN3A-206ENST00000565264 RB1CC1Q8TDY2 1594 aa34.62■■■■□ 3.13
SIN3A-206ENST00000565264 NACADO15069 1562 aa34.4■■■■□ 3.1
SIN3A-206ENST00000565264 DCAF8L2P0C7V8 631 aa34.39■■■■□ 3.1
SIN3A-206ENST00000565264 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
SIN3A-206ENST00000565264 DNAJC5BQ9UF47 199 aa33.93■■■■□ 3.02
SIN3A-206ENST00000565264 PABPN1Q86U42 306 aaKnown RBP eCLIP33.91■■■■□ 3.02
SIN3A-206ENST00000565264 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
SIN3A-206ENST00000565264 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
SIN3A-206ENST00000565264 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
SIN3A-206ENST00000565264 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
SIN3A-206ENST00000565264 SCRIBQ14160 1630 aa33.35■■■□□ 2.93
SIN3A-206ENST00000565264 SHROOM4Q9ULL8 1493 aa33.09■■■□□ 2.89
SIN3A-206ENST00000565264 CC2D2AQ9P2K1 1620 aa32.83■■■□□ 2.85
SIN3A-206ENST00000565264 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
SIN3A-206ENST00000565264 CECR2Q9BXF3 1484 aa32.7■■■□□ 2.83
SIN3A-206ENST00000565264 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
SIN3A-206ENST00000565264 NCAPD3P42695 1498 aa31.76■■■□□ 2.67
SIN3A-206ENST00000565264 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
SIN3A-206ENST00000565264 SMARCA2P51531 1590 aa31.63■■■□□ 2.65
SIN3A-206ENST00000565264 BAZ1AQ9NRL2 1556 aaPredicted RBP31.61■■■□□ 2.65
SIN3A-206ENST00000565264 HMGXB3Q12766 1538 aa31.56■■■□□ 2.64
SIN3A-206ENST00000565264 MROH2BQ7Z745 1585 aa31.46■■■□□ 2.63
SIN3A-206ENST00000565264 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
SIN3A-206ENST00000565264 PEG3Q9GZU2 1588 aa31.4■■■□□ 2.62
SIN3A-206ENST00000565264 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
SIN3A-206ENST00000565264 NESP48681 1621 aa31.31■■■□□ 2.6
SIN3A-206ENST00000565264 CUX2O14529 1486 aa31.16■■■□□ 2.58
SIN3A-206ENST00000565264 WIZO95785 1651 aa31.11■■■□□ 2.57
SIN3A-206ENST00000565264 LAMC3Q9Y6N6 1575 aa31.02■■■□□ 2.56
SIN3A-206ENST00000565264 THOC2Q8NI27 1593 aaKnown RBP30.92■■■□□ 2.54
SIN3A-206ENST00000565264 DNAJC5Q9H3Z4 198 aa30.91■■■□□ 2.54
SIN3A-206ENST00000565264 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
SIN3A-206ENST00000565264 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
SIN3A-206ENST00000565264 PDS5BQ9NTI5 1447 aa30.82■■■□□ 2.52
SIN3A-206ENST00000565264 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
SIN3A-206ENST00000565264 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
SIN3A-206ENST00000565264 MRC2Q9UBG0 1479 aa30.6■■■□□ 2.49
SIN3A-206ENST00000565264 CFTRP13569 1480 aa30.52■■■□□ 2.48
SIN3A-206ENST00000565264 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
SIN3A-206ENST00000565264 WDR62O43379 1518 aa30.52■■■□□ 2.48
SIN3A-206ENST00000565264 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.48
SIN3A-206ENST00000565264 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
SIN3A-206ENST00000565264 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
SIN3A-206ENST00000565264 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
SIN3A-206ENST00000565264 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
SIN3A-206ENST00000565264 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
SIN3A-206ENST00000565264 IFT140Q96RY7 1462 aa29.88■■■□□ 2.37
SIN3A-206ENST00000565264 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
SIN3A-206ENST00000565264 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
SIN3A-206ENST00000565264 OSCARQ8IYS5 282 aa29.77■■■□□ 2.36
SIN3A-206ENST00000565264 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
SIN3A-206ENST00000565264 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
SIN3A-206ENST00000565264 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
SIN3A-206ENST00000565264 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
SIN3A-206ENST00000565264 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
SIN3A-206ENST00000565264 AQRO60306 1485 aaKnown RBP eCLIP29.63■■■□□ 2.33
SIN3A-206ENST00000565264 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
SIN3A-206ENST00000565264 CUX1P39880 1505 aa29.55■■■□□ 2.32
SIN3A-206ENST00000565264 FGD5Q6ZNL6 1462 aa29.53■■■□□ 2.32
SIN3A-206ENST00000565264 SOGA1O94964 1423 aa29.52■■■□□ 2.32
SIN3A-206ENST00000565264 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
SIN3A-206ENST00000565264 CHD1O14646 1710 aa29.47■■■□□ 2.31
SIN3A-206ENST00000565264 RIMBP3CA6NJZ7 1639 aa29.44■■■□□ 2.3
SIN3A-206ENST00000565264 RIMBP3BA6NNM3 1639 aa29.44■■■□□ 2.3
SIN3A-206ENST00000565264 RIMBP3Q9UFD9 1639 aa29.44■■■□□ 2.3
SIN3A-206ENST00000565264 FBLN2P98095 1184 aa29.4■■■□□ 2.3
SIN3A-206ENST00000565264 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
SIN3A-206ENST00000565264 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
SIN3A-206ENST00000565264 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
SIN3A-206ENST00000565264 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
SIN3A-206ENST00000565264 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.26
SIN3A-206ENST00000565264 PBRM1Q86U86 1689 aa29.18■■■□□ 2.26
SIN3A-206ENST00000565264 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
SIN3A-206ENST00000565264 ABCA10Q8WWZ4 1543 aa29.16■■■□□ 2.26
SIN3A-206ENST00000565264 CHMP7Q8WUX9 453 aaPredicted RBP29.16■■■□□ 2.26
SIN3A-206ENST00000565264 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
SIN3A-206ENST00000565264 CYB5RLQ6IPT4 315 aa29.13■■■□□ 2.25
SIN3A-206ENST00000565264 SYNJ1O43426 1573 aa29.12■■■□□ 2.25
SIN3A-206ENST00000565264 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
SIN3A-206ENST00000565264 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
SIN3A-206ENST00000565264 WRNQ14191 1432 aaPredicted RBP eCLIP29.1■■■□□ 2.25
SIN3A-206ENST00000565264 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
SIN3A-206ENST00000565264 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
SIN3A-206ENST00000565264 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
SIN3A-206ENST00000565264 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
SIN3A-206ENST00000565264 GRIN2AQ12879 1464 aa28.87■■■□□ 2.21
SIN3A-206ENST00000565264 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
SIN3A-206ENST00000565264 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
SIN3A-206ENST00000565264 FHAD1B1AJZ9 1412 aa28.78■■■□□ 2.2
SIN3A-206ENST00000565264 TRHP20396 242 aaPredicted RBP28.75■■■□□ 2.19
SIN3A-206ENST00000565264 NUP160Q12769 1436 aa28.75■■■□□ 2.19
SIN3A-206ENST00000565264 ERCC6L2Q5T890 1561 aa28.74■■■□□ 2.19
SIN3A-206ENST00000565264 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
SIN3A-206ENST00000565264 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
SIN3A-206ENST00000565264 RUSC2Q8N2Y8 1516 aa28.5■■■□□ 2.15
SIN3A-206ENST00000565264 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
SIN3A-206ENST00000565264 IGF1RP08069 1367 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms