RNA–Protein interactions for RNA: ENST00000564998.1

HSDL1-204, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

TSL 4

Gene HSDL1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-204ENST00000564998 NISCHQ9Y2I1 1504 aa51.89■■■■■ 5.9
HSDL1-204ENST00000564998 ABCC9O60706 1549 aa48.38■■■■■ 5.34
HSDL1-204ENST00000564998 CCDC180Q9P1Z9 1646 aa47.05■■■■■ 5.12
HSDL1-204ENST00000564998 DNAJC5BQ9UF47 199 aa46.64■■■■■ 5.06
HSDL1-204ENST00000564998 RB1CC1Q8TDY2 1594 aa45.45■■■■■ 4.87
HSDL1-204ENST00000564998 PABPN1Q86U42 306 aaKnown RBP eCLIP44.92■■■■■ 4.78
HSDL1-204ENST00000564998 NACADO15069 1562 aa44.84■■■■■ 4.77
HSDL1-204ENST00000564998 DCAF8L2P0C7V8 631 aa44.48■■■■■ 4.71
HSDL1-204ENST00000564998 UNC13AQ9UPW8 1703 aa44.4■■■■■ 4.7
HSDL1-204ENST00000564998 BICRAQ9NZM4 1560 aa44.2■■■■■ 4.67
HSDL1-204ENST00000564998 MYO15BQ96JP2 1530 aa43.79■■■■■ 4.6
HSDL1-204ENST00000564998 DNAJC5Q9H3Z4 198 aa43.76■■■■■ 4.6
HSDL1-204ENST00000564998 CECR2Q9BXF3 1484 aa43.72■■■■■ 4.59
HSDL1-204ENST00000564998 CC2D2AQ9P2K1 1620 aa43.62■■■■■ 4.57
HSDL1-204ENST00000564998 SHROOM4Q9ULL8 1493 aa43.41■■■■■ 4.54
HSDL1-204ENST00000564998 EIF4G1Q04637 1599 aaKnown RBP43.2■■■■■ 4.51
HSDL1-204ENST00000564998 SCRIBQ14160 1630 aa42.81■■■■■ 4.44
HSDL1-204ENST00000564998 DCAF1Q9Y4B6 1507 aa42.76■■■■■ 4.44
HSDL1-204ENST00000564998 ZCCHC6Q5VYS8 1495 aaKnown RBP42.68■■■■■ 4.42
HSDL1-204ENST00000564998 CUX2O14529 1486 aa42.2■■■■■ 4.35
HSDL1-204ENST00000564998 ERCC6Q03468 1493 aa41.85■■■■■ 4.29
HSDL1-204ENST00000564998 NCAPD3P42695 1498 aa41.47■■■■■ 4.23
HSDL1-204ENST00000564998 TRIM41Q8WV44 630 aa41.28■■■■■ 4.2
HSDL1-204ENST00000564998 NESP48681 1621 aa41.2■■■■■ 4.19
HSDL1-204ENST00000564998 ATAD2BQ9ULI0 1458 aa41.13■■■■■ 4.17
HSDL1-204ENST00000564998 THOC2Q8NI27 1593 aaKnown RBP40.96■■■■■ 4.15
HSDL1-204ENST00000564998 HMGXB3Q12766 1538 aa40.95■■■■■ 4.15
HSDL1-204ENST00000564998 SMARCA2P51531 1590 aa40.91■■■■■ 4.14
HSDL1-204ENST00000564998 SMARCA4P51532 1647 aa40.71■■■■■ 4.11
HSDL1-204ENST00000564998 LAMC3Q9Y6N6 1575 aa40.67■■■■■ 4.1
HSDL1-204ENST00000564998 BAZ1BQ9UIG0 1483 aaKnown RBP40.64■■■■■ 4.1
HSDL1-204ENST00000564998 KIF21AQ7Z4S6 1674 aa40.56■■■■■ 4.08
HSDL1-204ENST00000564998 PDS5BQ9NTI5 1447 aa40.53■■■■■ 4.08
HSDL1-204ENST00000564998 PEG3Q9GZU2 1588 aa40.33■■■■■ 4.05
HSDL1-204ENST00000564998 BAZ1AQ9NRL2 1556 aaPredicted RBP40.33■■■■■ 4.05
HSDL1-204ENST00000564998 MRC2Q9UBG0 1479 aa40.22■■■■■ 4.03
HSDL1-204ENST00000564998 OSCARQ8IYS5 282 aa40.18■■■■■ 4.02
HSDL1-204ENST00000564998 WDR62O43379 1518 aa40.15■■■■■ 4.02
HSDL1-204ENST00000564998 CADPSQ9ULU8 1353 aa40.14■■■■■ 4.02
HSDL1-204ENST00000564998 MROH2BQ7Z745 1585 aa39.98■■■■□ 3.99
HSDL1-204ENST00000564998 CEP164Q9UPV0 1460 aa39.8■■■■□ 3.96
HSDL1-204ENST00000564998 RIMBP3CA6NJZ7 1639 aa39.68■■■■□ 3.94
HSDL1-204ENST00000564998 RIMBP3BA6NNM3 1639 aa39.68■■■■□ 3.94
HSDL1-204ENST00000564998 RIMBP3Q9UFD9 1639 aa39.68■■■■□ 3.94
HSDL1-204ENST00000564998 FANCD2Q9BXW9 1451 aa39.66■■■■□ 3.94
HSDL1-204ENST00000564998 ARHGEF11O15085 1522 aa39.42■■■■□ 3.9
HSDL1-204ENST00000564998 WIZO95785 1651 aa39.41■■■■□ 3.9
HSDL1-204ENST00000564998 URB2Q14146 1524 aaKnown RBP39.41■■■■□ 3.9
HSDL1-204ENST00000564998 CFTRP13569 1480 aa39.39■■■■□ 3.9
HSDL1-204ENST00000564998 CYB5RLQ6IPT4 315 aa39.33■■■■□ 3.89
HSDL1-204ENST00000564998 TRHP20396 242 aaPredicted RBP39.29■■■■□ 3.88
HSDL1-204ENST00000564998 ZNF608Q9ULD9 1512 aaPredicted RBP39.15■■■■□ 3.86
HSDL1-204ENST00000564998 AEBP2Q6ZN18 517 aaPredicted RBP39.09■■■■□ 3.85
HSDL1-204ENST00000564998 IFT140Q96RY7 1462 aa39.07■■■■□ 3.85
HSDL1-204ENST00000564998 ARAP1Q96P48 1450 aa38.95■■■■□ 3.83
HSDL1-204ENST00000564998 TOP2AP11388 1531 aaKnown RBP38.79■■■■□ 3.8
HSDL1-204ENST00000564998 EIF4G3O43432 1585 aaKnown RBP38.79■■■■□ 3.8
HSDL1-204ENST00000564998 PRDM2Q13029 1718 aa38.78■■■■□ 3.8
HSDL1-204ENST00000564998 CHD1O14646 1710 aa38.76■■■■□ 3.8
HSDL1-204ENST00000564998 TOPBP1Q92547 1522 aa38.75■■■■□ 3.79
HSDL1-204ENST00000564998 RSF1Q96T23 1441 aaPredicted RBP38.75■■■■□ 3.79
HSDL1-204ENST00000564998 FBLN2P98095 1184 aa38.7■■■■□ 3.79
HSDL1-204ENST00000564998 AQRO60306 1485 aaKnown RBP eCLIP38.66■■■■□ 3.78
HSDL1-204ENST00000564998 ABCC8Q09428 1581 aa38.61■■■■□ 3.77
HSDL1-204ENST00000564998 TARBP1Q13395 1621 aaKnown RBP38.5■■■■□ 3.75
HSDL1-204ENST00000564998 DNMBPQ6XZF7 1577 aa38.47■■■■□ 3.75
HSDL1-204ENST00000564998 CCDC88BA6NC98 1476 aa38.44■■■■□ 3.74
HSDL1-204ENST00000564998 CLASP1Q7Z460 1538 aa38.31■■■■□ 3.72
HSDL1-204ENST00000564998 POLA1P09884 1462 aaPredicted RBP38.27■■■■□ 3.72
HSDL1-204ENST00000564998 TDRD9Q8NDG6 1382 aaKnown RBP38.23■■■■□ 3.71
HSDL1-204ENST00000564998 CHMP7Q8WUX9 453 aaPredicted RBP38.21■■■■□ 3.71
HSDL1-204ENST00000564998 RAD54L2Q9Y4B4 1467 aa38.19■■■■□ 3.7
HSDL1-204ENST00000564998 SNAPC4Q5SXM2 1469 aa38.17■■■■□ 3.7
HSDL1-204ENST00000564998 SYNJ1O43426 1573 aa38.16■■■■□ 3.7
HSDL1-204ENST00000564998 SOGA1O94964 1423 aa38.13■■■■□ 3.7
HSDL1-204ENST00000564998 GAPVD1Q14C86 1478 aa38.03■■■■□ 3.68
HSDL1-204ENST00000564998 MAGI1Q96QZ7 1491 aaPredicted RBP38.03■■■■□ 3.68
HSDL1-204ENST00000564998 WDR97A6NE52 1622 aa37.97■■■■□ 3.67
HSDL1-204ENST00000564998 SYNJ2O15056 1496 aa37.93■■■■□ 3.66
HSDL1-204ENST00000564998 GRIN2BQ13224 1484 aa37.9■■■■□ 3.66
HSDL1-204ENST00000564998 FGD5Q6ZNL6 1462 aa37.85■■■■□ 3.65
HSDL1-204ENST00000564998 ERCC6L2Q5T890 1561 aa37.64■■■■□ 3.62
HSDL1-204ENST00000564998 CUX1P39880 1505 aa37.62■■■■□ 3.61
HSDL1-204ENST00000564998 PBRM1Q86U86 1689 aa37.6■■■■□ 3.61
HSDL1-204ENST00000564998 ILDR1Q86SU0 546 aaPredicted RBP37.56■■■■□ 3.6
HSDL1-204ENST00000564998 KIF13AQ9H1H9 1805 aa37.52■■■■□ 3.6
HSDL1-204ENST00000564998 CEP170Q5SW79 1584 aa37.46■■■■□ 3.59
HSDL1-204ENST00000564998 GRIN2AQ12879 1464 aa37.4■■■■□ 3.58
HSDL1-204ENST00000564998 KDM4FA0A1W2PPD8 638 aa37.37■■■■□ 3.57
HSDL1-204ENST00000564998 ABCA5Q8WWZ7 1642 aa37.36■■■■□ 3.57
HSDL1-204ENST00000564998 ABCA10Q8WWZ4 1543 aa37.36■■■■□ 3.57
HSDL1-204ENST00000564998 NUP160Q12769 1436 aa37.35■■■■□ 3.57
HSDL1-204ENST00000564998 SHROOM2Q13796 1616 aa37.29■■■■□ 3.56
HSDL1-204ENST00000564998 FAM69CQ0P6D2 419 aa37.28■■■■□ 3.56
HSDL1-204ENST00000564998 ABCC10Q5T3U5 1492 aa37.2■■■■□ 3.54
HSDL1-204ENST00000564998 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
HSDL1-204ENST00000564998 PRG4Q92954 1404 aaPredicted RBP37.11■■■■□ 3.53
HSDL1-204ENST00000564998 NPM1P06748 294 aaKnown RBP eCLIP37.1■■■■□ 3.53
HSDL1-204ENST00000564998 FHAD1B1AJZ9 1412 aa37.09■■■■□ 3.53
HSDL1-204ENST00000564998 JPH4Q96JJ6 628 aa37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms