RNA–Protein interactions for RNA: ENST00000564968.1

CLCN7-208, Transcript of chloride voltage-gated channel 7, human

TSL 4

Gene CLCN7, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN7-208	ENST00000564968	NISCH	Q9Y2I1	1504 aa		40.32	■■■■■ 4.05
CLCN7-208	ENST00000564968	ABCC9	O60706	1549 aa		36.62	■■■■□ 3.45
CLCN7-208	ENST00000564968	CCDC180	Q9P1Z9	1646 aa		36.38	■■■■□ 3.41
CLCN7-208	ENST00000564968	RB1CC1	Q8TDY2	1594 aa		34.72	■■■■□ 3.15
CLCN7-208	ENST00000564968	DNAJC5B	Q9UF47	199 aa		34.4	■■■■□ 3.1
CLCN7-208	ENST00000564968	NACAD	O15069	1562 aa		34.36	■■■■□ 3.09
CLCN7-208	ENST00000564968	DCAF8L2	P0C7V8	631 aa		34.17	■■■■□ 3.06
CLCN7-208	ENST00000564968	UNC13A	Q9UPW8	1703 aa		34.07	■■■■□ 3.05
CLCN7-208	ENST00000564968	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.98	■■■■□ 3.03
CLCN7-208	ENST00000564968	MYO15B	Q96JP2	1530 aa		33.71	■■■□□ 2.99
CLCN7-208	ENST00000564968	BICRA	Q9NZM4	1560 aa		33.71	■■■□□ 2.99
CLCN7-208	ENST00000564968	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.4	■■■□□ 2.94
CLCN7-208	ENST00000564968	DCAF1	Q9Y4B6	1507 aa		33.23	■■■□□ 2.91
CLCN7-208	ENST00000564968	SCRIB	Q14160	1630 aa		33.22	■■■□□ 2.91
CLCN7-208	ENST00000564968	SHROOM4	Q9ULL8	1493 aa		33.14	■■■□□ 2.9
CLCN7-208	ENST00000564968	CC2D2A	Q9P2K1	1620 aa		33.06	■■■□□ 2.88
CLCN7-208	ENST00000564968	CECR2	Q9BXF3	1484 aa		32.96	■■■□□ 2.87
CLCN7-208	ENST00000564968	EIF4G1	Q04637	1599 aa	Known RBP	32.92	■■■□□ 2.86
CLCN7-208	ENST00000564968	DNAJC5	Q9H3Z4	198 aa		31.72	■■■□□ 2.67
CLCN7-208	ENST00000564968	NCAPD3	P42695	1498 aa		31.65	■■■□□ 2.66
CLCN7-208	ENST00000564968	ERCC6	Q03468	1493 aa		31.65	■■■□□ 2.66
CLCN7-208	ENST00000564968	SMARCA4	P51532	1647 aa		31.6	■■■□□ 2.65
CLCN7-208	ENST00000564968	ATAD2B	Q9ULI0	1458 aa		31.59	■■■□□ 2.65
CLCN7-208	ENST00000564968	CUX2	O14529	1486 aa		31.58	■■■□□ 2.65
CLCN7-208	ENST00000564968	SMARCA2	P51531	1590 aa		31.53	■■■□□ 2.64
CLCN7-208	ENST00000564968	HMGXB3	Q12766	1538 aa		31.5	■■■□□ 2.63
CLCN7-208	ENST00000564968	NES	P48681	1621 aa		31.38	■■■□□ 2.61
CLCN7-208	ENST00000564968	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.34	■■■□□ 2.61
CLCN7-208	ENST00000564968	BAZ1B	Q9UIG0	1483 aa	Known RBP	31.33	■■■□□ 2.61
CLCN7-208	ENST00000564968	PEG3	Q9GZU2	1588 aa		31.19	■■■□□ 2.58
CLCN7-208	ENST00000564968	THOC2	Q8NI27	1593 aa	Known RBP	31.16	■■■□□ 2.58
CLCN7-208	ENST00000564968	MROH2B	Q7Z745	1585 aa		31.11	■■■□□ 2.57
CLCN7-208	ENST00000564968	LAMC3	Q9Y6N6	1575 aa		31.09	■■■□□ 2.57
CLCN7-208	ENST00000564968	KIF21A	Q7Z4S6	1674 aa		31.09	■■■□□ 2.57
CLCN7-208	ENST00000564968	PDS5B	Q9NTI5	1447 aa		30.85	■■■□□ 2.53
CLCN7-208	ENST00000564968	WIZ	O95785	1651 aa		30.8	■■■□□ 2.52
CLCN7-208	ENST00000564968	CADPS	Q9ULU8	1353 aa		30.69	■■■□□ 2.5
CLCN7-208	ENST00000564968	MRC2	Q9UBG0	1479 aa		30.67	■■■□□ 2.5
CLCN7-208	ENST00000564968	WDR62	O43379	1518 aa		30.61	■■■□□ 2.49
CLCN7-208	ENST00000564968	CEP164	Q9UPV0	1460 aa		30.52	■■■□□ 2.48
CLCN7-208	ENST00000564968	FANCD2	Q9BXW9	1451 aa		30.44	■■■□□ 2.46
CLCN7-208	ENST00000564968	TRIM41	Q8WV44	630 aa		30.42	■■■□□ 2.46
CLCN7-208	ENST00000564968	TOP2A	P11388	1531 aa	Known RBP	30.34	■■■□□ 2.45
CLCN7-208	ENST00000564968	CFTR	P13569	1480 aa		30.31	■■■□□ 2.44
CLCN7-208	ENST00000564968	RSF1	Q96T23	1441 aa	Predicted RBP	30.3	■■■□□ 2.44
CLCN7-208	ENST00000564968	PRDM2	Q13029	1718 aa		30.22	■■■□□ 2.43
CLCN7-208	ENST00000564968	URB2	Q14146	1524 aa	Known RBP	30.22	■■■□□ 2.43
CLCN7-208	ENST00000564968	OSCAR	Q8IYS5	282 aa		30	■■■□□ 2.39
CLCN7-208	ENST00000564968	CCDC88B	A6NC98	1476 aa		29.93	■■■□□ 2.38
CLCN7-208	ENST00000564968	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.89	■■■□□ 2.38
CLCN7-208	ENST00000564968	IFT140	Q96RY7	1462 aa		29.87	■■■□□ 2.37
CLCN7-208	ENST00000564968	RIMBP3C	A6NJZ7	1639 aa		29.85	■■■□□ 2.37
CLCN7-208	ENST00000564968	RIMBP3B	A6NNM3	1639 aa		29.85	■■■□□ 2.37
CLCN7-208	ENST00000564968	RIMBP3	Q9UFD9	1639 aa		29.85	■■■□□ 2.37
CLCN7-208	ENST00000564968	TOPBP1	Q92547	1522 aa		29.84	■■■□□ 2.37
CLCN7-208	ENST00000564968	EIF4G3	O43432	1585 aa	Known RBP	29.81	■■■□□ 2.36
CLCN7-208	ENST00000564968	DNMBP	Q6XZF7	1577 aa		29.74	■■■□□ 2.35
CLCN7-208	ENST00000564968	ARHGEF11	O15085	1522 aa		29.68	■■■□□ 2.34
CLCN7-208	ENST00000564968	CHD1	O14646	1710 aa		29.68	■■■□□ 2.34
CLCN7-208	ENST00000564968	ABCC8	Q09428	1581 aa		29.67	■■■□□ 2.34
CLCN7-208	ENST00000564968	TARBP1	Q13395	1621 aa	Known RBP	29.62	■■■□□ 2.33
CLCN7-208	ENST00000564968	AQR	O60306	1485 aa	Known RBP eCLIP	29.55	■■■□□ 2.32	1e-12	■□□□□ 8.6
CLCN7-208	ENST00000564968	POLA1	P09884	1462 aa	Predicted RBP	29.52	■■■□□ 2.32
CLCN7-208	ENST00000564968	FBLN2	P98095	1184 aa		29.43	■■■□□ 2.3
CLCN7-208	ENST00000564968	RAD54L2	Q9Y4B4	1467 aa		29.42	■■■□□ 2.3
CLCN7-208	ENST00000564968	CYB5RL	Q6IPT4	315 aa		29.39	■■■□□ 2.3
CLCN7-208	ENST00000564968	ARAP1	Q96P48	1450 aa		29.37	■■■□□ 2.29
CLCN7-208	ENST00000564968	FGD5	Q6ZNL6	1462 aa		29.33	■■■□□ 2.29
CLCN7-208	ENST00000564968	SOGA1	O94964	1423 aa		29.32	■■■□□ 2.28
CLCN7-208	ENST00000564968	TDRD9	Q8NDG6	1382 aa	Known RBP	29.32	■■■□□ 2.28
CLCN7-208	ENST00000564968	SNAPC4	Q5SXM2	1469 aa		29.31	■■■□□ 2.28
CLCN7-208	ENST00000564968	CUX1	P39880	1505 aa		29.26	■■■□□ 2.27
CLCN7-208	ENST00000564968	WDR97	A6NE52	1622 aa		29.26	■■■□□ 2.27
CLCN7-208	ENST00000564968	TRH	P20396	242 aa	Predicted RBP	29.2	■■■□□ 2.26
CLCN7-208	ENST00000564968	CLASP1	Q7Z460	1538 aa		29.2	■■■□□ 2.26
CLCN7-208	ENST00000564968	SYNJ1	O43426	1573 aa		29.18	■■■□□ 2.26
CLCN7-208	ENST00000564968	PBRM1	Q86U86	1689 aa		29.18	■■■□□ 2.26
CLCN7-208	ENST00000564968	MAGI1	Q96QZ7	1491 aa	Predicted RBP	29.16	■■■□□ 2.26
CLCN7-208	ENST00000564968	GRIN2B	Q13224	1484 aa		29.13	■■■□□ 2.25
CLCN7-208	ENST00000564968	CHMP7	Q8WUX9	453 aa	Predicted RBP	29.11	■■■□□ 2.25
CLCN7-208	ENST00000564968	SYNJ2	O15056	1496 aa		29.07	■■■□□ 2.24
CLCN7-208	ENST00000564968	GAPVD1	Q14C86	1478 aa		29	■■■□□ 2.23
CLCN7-208	ENST00000564968	ABCA5	Q8WWZ7	1642 aa		28.99	■■■□□ 2.23
CLCN7-208	ENST00000564968	ABCA10	Q8WWZ4	1543 aa		28.92	■■■□□ 2.22
CLCN7-208	ENST00000564968	SUPT5H	O00267	1087 aa	Known RBP	28.85	■■■□□ 2.21
CLCN7-208	ENST00000564968	ADAMTS12	P58397	1594 aa		28.82	■■■□□ 2.2
CLCN7-208	ENST00000564968	GRIN2A	Q12879	1464 aa		28.78	■■■□□ 2.2
CLCN7-208	ENST00000564968	ERCC6L2	Q5T890	1561 aa		28.78	■■■□□ 2.2
CLCN7-208	ENST00000564968	BIVM-ERCC5	R4GMW8	1640 aa		28.76	■■■□□ 2.2
CLCN7-208	ENST00000564968	CEP170	Q5SW79	1584 aa		28.75	■■■□□ 2.19
CLCN7-208	ENST00000564968	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.74	■■■□□ 2.19
CLCN7-208	ENST00000564968	TOP2B	Q02880	1626 aa		28.72	■■■□□ 2.19
CLCN7-208	ENST00000564968	NUP160	Q12769	1436 aa		28.64	■■■□□ 2.18
CLCN7-208	ENST00000564968	SHROOM2	Q13796	1616 aa		28.61	■■■□□ 2.17
CLCN7-208	ENST00000564968	FHAD1	B1AJZ9	1412 aa		28.59	■■■□□ 2.17
CLCN7-208	ENST00000564968	ERICH3	Q5RHP9	1530 aa		28.57	■■■□□ 2.16
CLCN7-208	ENST00000564968	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.52	■■■□□ 2.16
CLCN7-208	ENST00000564968	KIF13A	Q9H1H9	1805 aa		28.46	■■■□□ 2.15
CLCN7-208	ENST00000564968	RUSC2	Q8N2Y8	1516 aa		28.43	■■■□□ 2.14
CLCN7-208	ENST00000564968	PRG4	Q92954	1404 aa	Predicted RBP	28.42	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms