RNA–Protein interactions for RNA: ENST00000564910.5

RAB11A-203, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-203ENST00000564910 NISCHQ9Y2I1 1504 aa28.35■■■□□ 2.13
RAB11A-203ENST00000564910 ABCC9O60706 1549 aa25.78■■□□□ 1.72
RAB11A-203ENST00000564910 AEBP2Q6ZN18 517 aaPredicted RBP25.76■■□□□ 1.71
RAB11A-203ENST00000564910 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
RAB11A-203ENST00000564910 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
RAB11A-203ENST00000564910 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
RAB11A-203ENST00000564910 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
RAB11A-203ENST00000564910 NACADO15069 1562 aa24.2■■□□□ 1.46
RAB11A-203ENST00000564910 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
RAB11A-203ENST00000564910 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
RAB11A-203ENST00000564910 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
RAB11A-203ENST00000564910 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
RAB11A-203ENST00000564910 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
RAB11A-203ENST00000564910 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.34
RAB11A-203ENST00000564910 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
RAB11A-203ENST00000564910 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
RAB11A-203ENST00000564910 CC2D2AQ9P2K1 1620 aa23.29■■□□□ 1.32
RAB11A-203ENST00000564910 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
RAB11A-203ENST00000564910 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
RAB11A-203ENST00000564910 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
RAB11A-203ENST00000564910 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
RAB11A-203ENST00000564910 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
RAB11A-203ENST00000564910 CUX2O14529 1486 aa22.31■■□□□ 1.16
RAB11A-203ENST00000564910 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
RAB11A-203ENST00000564910 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
RAB11A-203ENST00000564910 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
RAB11A-203ENST00000564910 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
RAB11A-203ENST00000564910 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
RAB11A-203ENST00000564910 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
RAB11A-203ENST00000564910 NESP48681 1621 aa22.09■■□□□ 1.13
RAB11A-203ENST00000564910 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
RAB11A-203ENST00000564910 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
RAB11A-203ENST00000564910 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
RAB11A-203ENST00000564910 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
RAB11A-203ENST00000564910 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
RAB11A-203ENST00000564910 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
RAB11A-203ENST00000564910 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
RAB11A-203ENST00000564910 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
RAB11A-203ENST00000564910 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
RAB11A-203ENST00000564910 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
RAB11A-203ENST00000564910 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
RAB11A-203ENST00000564910 WIZO95785 1651 aa21.58■■□□□ 1.05
RAB11A-203ENST00000564910 WDR62O43379 1518 aa21.56■■□□□ 1.04
RAB11A-203ENST00000564910 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
RAB11A-203ENST00000564910 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
RAB11A-203ENST00000564910 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
RAB11A-203ENST00000564910 CFTRP13569 1480 aa21.37■■□□□ 1.01
RAB11A-203ENST00000564910 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
RAB11A-203ENST00000564910 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
RAB11A-203ENST00000564910 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
RAB11A-203ENST00000564910 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
RAB11A-203ENST00000564910 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
RAB11A-203ENST00000564910 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
RAB11A-203ENST00000564910 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
RAB11A-203ENST00000564910 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
RAB11A-203ENST00000564910 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
RAB11A-203ENST00000564910 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
RAB11A-203ENST00000564910 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
RAB11A-203ENST00000564910 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
RAB11A-203ENST00000564910 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
RAB11A-203ENST00000564910 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
RAB11A-203ENST00000564910 ABCC8Q09428 1581 aa20.89■□□□□ 0.94
RAB11A-203ENST00000564910 DNMBPQ6XZF7 1577 aa20.88■□□□□ 0.93
RAB11A-203ENST00000564910 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
RAB11A-203ENST00000564910 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.929e-9■■■■□ 19.4
RAB11A-203ENST00000564910 CHD1O14646 1710 aa20.8■□□□□ 0.92
RAB11A-203ENST00000564910 CYB5RLQ6IPT4 315 aa20.76■□□□□ 0.91
RAB11A-203ENST00000564910 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
RAB11A-203ENST00000564910 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
RAB11A-203ENST00000564910 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
RAB11A-203ENST00000564910 FBLN2P98095 1184 aa20.68■□□□□ 0.9
RAB11A-203ENST00000564910 SOGA1O94964 1423 aa20.64■□□□□ 0.89
RAB11A-203ENST00000564910 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
RAB11A-203ENST00000564910 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
RAB11A-203ENST00000564910 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
RAB11A-203ENST00000564910 TRHP20396 242 aaPredicted RBP20.58■□□□□ 0.89
RAB11A-203ENST00000564910 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
RAB11A-203ENST00000564910 FOXD1Q16676 465 aa20.57■□□□□ 0.88
RAB11A-203ENST00000564910 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
RAB11A-203ENST00000564910 CUX1P39880 1505 aa20.54■□□□□ 0.88
RAB11A-203ENST00000564910 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
RAB11A-203ENST00000564910 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
RAB11A-203ENST00000564910 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
RAB11A-203ENST00000564910 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
RAB11A-203ENST00000564910 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
RAB11A-203ENST00000564910 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
RAB11A-203ENST00000564910 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
RAB11A-203ENST00000564910 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
RAB11A-203ENST00000564910 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
RAB11A-203ENST00000564910 ERCC6L2Q5T890 1561 aa20.24■□□□□ 0.83
RAB11A-203ENST00000564910 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
RAB11A-203ENST00000564910 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
RAB11A-203ENST00000564910 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
RAB11A-203ENST00000564910 CEP170Q5SW79 1584 aa20.19■□□□□ 0.82
RAB11A-203ENST00000564910 NUP160Q12769 1436 aa20.19■□□□□ 0.82
RAB11A-203ENST00000564910 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
RAB11A-203ENST00000564910 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
RAB11A-203ENST00000564910 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
RAB11A-203ENST00000564910 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
RAB11A-203ENST00000564910 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms