RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 NISCHQ9Y2I1 1504 aa25.92■■□□□ 1.74
SNX29-204ENST00000564791 CCDC180Q9P1Z9 1646 aa22.72■■□□□ 1.23
SNX29-204ENST00000564791 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
SNX29-204ENST00000564791 ABCC9O60706 1549 aa21.57■■□□□ 1.04
SNX29-204ENST00000564791 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
SNX29-204ENST00000564791 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
SNX29-204ENST00000564791 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
SNX29-204ENST00000564791 NACADO15069 1562 aa21.16■□□□□ 0.98
SNX29-204ENST00000564791 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
SNX29-204ENST00000564791 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
SNX29-204ENST00000564791 SCRIBQ14160 1630 aa20.87■□□□□ 0.93
SNX29-204ENST00000564791 UNC13AQ9UPW8 1703 aa20.66■□□□□ 0.9
SNX29-204ENST00000564791 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
SNX29-204ENST00000564791 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.84
SNX29-204ENST00000564791 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
SNX29-204ENST00000564791 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
SNX29-204ENST00000564791 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
SNX29-204ENST00000564791 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
SNX29-204ENST00000564791 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
SNX29-204ENST00000564791 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
SNX29-204ENST00000564791 WIZO95785 1651 aa19.88■□□□□ 0.77
SNX29-204ENST00000564791 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
SNX29-204ENST00000564791 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
SNX29-204ENST00000564791 TOP2AP11388 1531 aaKnown RBP19.67■□□□□ 0.74
SNX29-204ENST00000564791 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SNX29-204ENST00000564791 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
SNX29-204ENST00000564791 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
SNX29-204ENST00000564791 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
SNX29-204ENST00000564791 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
SNX29-204ENST00000564791 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
SNX29-204ENST00000564791 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
SNX29-204ENST00000564791 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
SNX29-204ENST00000564791 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
SNX29-204ENST00000564791 CFTRP13569 1480 aa19.03■□□□□ 0.64
SNX29-204ENST00000564791 PRDM2Q13029 1718 aa19.02■□□□□ 0.64
SNX29-204ENST00000564791 ABCC8Q09428 1581 aa19■□□□□ 0.63
SNX29-204ENST00000564791 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
SNX29-204ENST00000564791 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
SNX29-204ENST00000564791 NESP48681 1621 aa18.91■□□□□ 0.62
SNX29-204ENST00000564791 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
SNX29-204ENST00000564791 WRNQ14191 1432 aaPredicted RBP eCLIP18.86■□□□□ 0.619e-6■■■■■ 50.1
SNX29-204ENST00000564791 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
SNX29-204ENST00000564791 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
SNX29-204ENST00000564791 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
SNX29-204ENST00000564791 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
SNX29-204ENST00000564791 CUX1P39880 1505 aa18.74■□□□□ 0.59
SNX29-204ENST00000564791 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
SNX29-204ENST00000564791 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
SNX29-204ENST00000564791 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
SNX29-204ENST00000564791 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
SNX29-204ENST00000564791 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
SNX29-204ENST00000564791 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
SNX29-204ENST00000564791 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
SNX29-204ENST00000564791 SOGA1O94964 1423 aa18.58■□□□□ 0.56
SNX29-204ENST00000564791 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
SNX29-204ENST00000564791 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
SNX29-204ENST00000564791 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.55
SNX29-204ENST00000564791 EEA1Q15075 1411 aa18.51■□□□□ 0.55
SNX29-204ENST00000564791 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
SNX29-204ENST00000564791 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
SNX29-204ENST00000564791 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
SNX29-204ENST00000564791 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
SNX29-204ENST00000564791 WDR62O43379 1518 aa18.43■□□□□ 0.54
SNX29-204ENST00000564791 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
SNX29-204ENST00000564791 WDR97A6NE52 1622 aa18.39■□□□□ 0.54
SNX29-204ENST00000564791 CUX2O14529 1486 aa18.39■□□□□ 0.54
SNX29-204ENST00000564791 KIF27Q86VH2 1401 aa18.39■□□□□ 0.53
SNX29-204ENST00000564791 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
SNX29-204ENST00000564791 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
SNX29-204ENST00000564791 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
SNX29-204ENST00000564791 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
SNX29-204ENST00000564791 KIF21BO75037 1637 aa18.32■□□□□ 0.52
SNX29-204ENST00000564791 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
SNX29-204ENST00000564791 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
SNX29-204ENST00000564791 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
SNX29-204ENST00000564791 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
SNX29-204ENST00000564791 IGF1RP08069 1367 aa18.23■□□□□ 0.51
SNX29-204ENST00000564791 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
SNX29-204ENST00000564791 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
SNX29-204ENST00000564791 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
SNX29-204ENST00000564791 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
SNX29-204ENST00000564791 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
SNX29-204ENST00000564791 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
SNX29-204ENST00000564791 CUL7Q14999 1698 aa18.17■□□□□ 0.5
SNX29-204ENST00000564791 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
SNX29-204ENST00000564791 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
SNX29-204ENST00000564791 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX29-204ENST00000564791 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
SNX29-204ENST00000564791 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
SNX29-204ENST00000564791 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
SNX29-204ENST00000564791 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
SNX29-204ENST00000564791 ADAMTS12P58397 1594 aa18.06■□□□□ 0.48
SNX29-204ENST00000564791 SNAPC4Q5SXM2 1469 aa18■□□□□ 0.47
SNX29-204ENST00000564791 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
SNX29-204ENST00000564791 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
SNX29-204ENST00000564791 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
SNX29-204ENST00000564791 CLIP1P30622 1438 aa17.96■□□□□ 0.47
SNX29-204ENST00000564791 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
SNX29-204ENST00000564791 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
SNX29-204ENST00000564791 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms