RNA–Protein interactions for RNA: ENST00000564764.5

RNPS1-211, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 3

Gene RNPS1, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-211ENST00000564764 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
RNPS1-211ENST00000564764 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
RNPS1-211ENST00000564764 ABCC9O60706 1549 aa23.1■■□□□ 1.29
RNPS1-211ENST00000564764 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
RNPS1-211ENST00000564764 NACADO15069 1562 aa22.16■■□□□ 1.14
RNPS1-211ENST00000564764 MYO15BQ96JP2 1530 aa22.02■■□□□ 1.12
RNPS1-211ENST00000564764 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
RNPS1-211ENST00000564764 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
RNPS1-211ENST00000564764 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
RNPS1-211ENST00000564764 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
RNPS1-211ENST00000564764 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
RNPS1-211ENST00000564764 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
RNPS1-211ENST00000564764 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
RNPS1-211ENST00000564764 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.02
RNPS1-211ENST00000564764 SCRIBQ14160 1630 aa21.33■■□□□ 1
RNPS1-211ENST00000564764 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
RNPS1-211ENST00000564764 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
RNPS1-211ENST00000564764 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
RNPS1-211ENST00000564764 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
RNPS1-211ENST00000564764 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
RNPS1-211ENST00000564764 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
RNPS1-211ENST00000564764 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
RNPS1-211ENST00000564764 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
RNPS1-211ENST00000564764 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
RNPS1-211ENST00000564764 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
RNPS1-211ENST00000564764 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
RNPS1-211ENST00000564764 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
RNPS1-211ENST00000564764 DNAJC5Q9H3Z4 198 aa20.05■□□□□ 0.8
RNPS1-211ENST00000564764 WIZO95785 1651 aa19.97■□□□□ 0.79
RNPS1-211ENST00000564764 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
RNPS1-211ENST00000564764 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
RNPS1-211ENST00000564764 NESP48681 1621 aa19.93■□□□□ 0.78
RNPS1-211ENST00000564764 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
RNPS1-211ENST00000564764 CUX2O14529 1486 aa19.91■□□□□ 0.78
RNPS1-211ENST00000564764 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
RNPS1-211ENST00000564764 TOP2AP11388 1531 aaKnown RBP19.8■□□□□ 0.76
RNPS1-211ENST00000564764 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
RNPS1-211ENST00000564764 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
RNPS1-211ENST00000564764 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
RNPS1-211ENST00000564764 CFTRP13569 1480 aa19.67■□□□□ 0.74
RNPS1-211ENST00000564764 MRC2Q9UBG0 1479 aa19.59■□□□□ 0.73
RNPS1-211ENST00000564764 WDR62O43379 1518 aa19.56■□□□□ 0.72
RNPS1-211ENST00000564764 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
RNPS1-211ENST00000564764 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
RNPS1-211ENST00000564764 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
RNPS1-211ENST00000564764 PRDM2Q13029 1718 aa19.49■□□□□ 0.71
RNPS1-211ENST00000564764 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
RNPS1-211ENST00000564764 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
RNPS1-211ENST00000564764 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
RNPS1-211ENST00000564764 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
RNPS1-211ENST00000564764 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
RNPS1-211ENST00000564764 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
RNPS1-211ENST00000564764 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
RNPS1-211ENST00000564764 ZNF608Q9ULD9 1512 aaPredicted RBP19.06■□□□□ 0.64
RNPS1-211ENST00000564764 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
RNPS1-211ENST00000564764 TARBP1Q13395 1621 aaKnown RBP19.05■□□□□ 0.64
RNPS1-211ENST00000564764 EIF4G3O43432 1585 aaKnown RBP19.01■□□□□ 0.63
RNPS1-211ENST00000564764 CUX1P39880 1505 aa18.99■□□□□ 0.63
RNPS1-211ENST00000564764 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
RNPS1-211ENST00000564764 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
RNPS1-211ENST00000564764 FGD5Q6ZNL6 1462 aa18.96■□□□□ 0.63
RNPS1-211ENST00000564764 SOGA1O94964 1423 aa18.95■□□□□ 0.62
RNPS1-211ENST00000564764 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
RNPS1-211ENST00000564764 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.623e-7■■■■□ 23.4
RNPS1-211ENST00000564764 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.61
RNPS1-211ENST00000564764 ABCA10Q8WWZ4 1543 aa18.8■□□□□ 0.6
RNPS1-211ENST00000564764 BIVM-ERCC5R4GMW8 1640 aa18.8■□□□□ 0.6
RNPS1-211ENST00000564764 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
RNPS1-211ENST00000564764 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
RNPS1-211ENST00000564764 CHD1O14646 1710 aa18.78■□□□□ 0.6
RNPS1-211ENST00000564764 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
RNPS1-211ENST00000564764 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
RNPS1-211ENST00000564764 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
RNPS1-211ENST00000564764 ABCA5Q8WWZ7 1642 aa18.74■□□□□ 0.59
RNPS1-211ENST00000564764 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
RNPS1-211ENST00000564764 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
RNPS1-211ENST00000564764 PBRM1Q86U86 1689 aa18.71■□□□□ 0.59
RNPS1-211ENST00000564764 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
RNPS1-211ENST00000564764 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
RNPS1-211ENST00000564764 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
RNPS1-211ENST00000564764 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
RNPS1-211ENST00000564764 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
RNPS1-211ENST00000564764 FBLN2P98095 1184 aa18.67■□□□□ 0.58
RNPS1-211ENST00000564764 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
RNPS1-211ENST00000564764 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.57
RNPS1-211ENST00000564764 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
RNPS1-211ENST00000564764 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
RNPS1-211ENST00000564764 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
RNPS1-211ENST00000564764 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
RNPS1-211ENST00000564764 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
RNPS1-211ENST00000564764 NUP160Q12769 1436 aa18.49■□□□□ 0.55
RNPS1-211ENST00000564764 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
RNPS1-211ENST00000564764 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
RNPS1-211ENST00000564764 KIF27Q86VH2 1401 aa18.42■□□□□ 0.54
RNPS1-211ENST00000564764 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
RNPS1-211ENST00000564764 IGF1RP08069 1367 aa18.37■□□□□ 0.53
RNPS1-211ENST00000564764 CUL7Q14999 1698 aa18.36■□□□□ 0.53
RNPS1-211ENST00000564764 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
RNPS1-211ENST00000564764 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
RNPS1-211ENST00000564764 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms