RNA–Protein interactions for RNA: ENST00000564701.1

ACSM3-209, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 3

Gene ACSM3, Length 756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-209ENST00000564701 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
ACSM3-209ENST00000564701 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
ACSM3-209ENST00000564701 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
ACSM3-209ENST00000564701 ABCC9O60706 1549 aa17.54■□□□□ 0.4
ACSM3-209ENST00000564701 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
ACSM3-209ENST00000564701 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
ACSM3-209ENST00000564701 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
ACSM3-209ENST00000564701 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
ACSM3-209ENST00000564701 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
ACSM3-209ENST00000564701 NACADO15069 1562 aa16.68■□□□□ 0.26
ACSM3-209ENST00000564701 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
ACSM3-209ENST00000564701 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
ACSM3-209ENST00000564701 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
ACSM3-209ENST00000564701 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
ACSM3-209ENST00000564701 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
ACSM3-209ENST00000564701 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
ACSM3-209ENST00000564701 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
ACSM3-209ENST00000564701 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
ACSM3-209ENST00000564701 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
ACSM3-209ENST00000564701 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
ACSM3-209ENST00000564701 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
ACSM3-209ENST00000564701 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
ACSM3-209ENST00000564701 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
ACSM3-209ENST00000564701 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
ACSM3-209ENST00000564701 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
ACSM3-209ENST00000564701 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
ACSM3-209ENST00000564701 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
ACSM3-209ENST00000564701 WIZO95785 1651 aa15.5■□□□□ 0.07
ACSM3-209ENST00000564701 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
ACSM3-209ENST00000564701 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
ACSM3-209ENST00000564701 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
ACSM3-209ENST00000564701 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
ACSM3-209ENST00000564701 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
ACSM3-209ENST00000564701 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
ACSM3-209ENST00000564701 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
ACSM3-209ENST00000564701 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
ACSM3-209ENST00000564701 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
ACSM3-209ENST00000564701 NESP48681 1621 aa15.08■□□□□ 0
ACSM3-209ENST00000564701 DNAJC5Q9H3Z4 198 aa15.02■□□□□ -0
ACSM3-209ENST00000564701 CUX2O14529 1486 aa15.01□□□□□ -0.01
ACSM3-209ENST00000564701 CFTRP13569 1480 aa14.97□□□□□ -0.01
ACSM3-209ENST00000564701 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
ACSM3-209ENST00000564701 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
ACSM3-209ENST00000564701 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
ACSM3-209ENST00000564701 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
ACSM3-209ENST00000564701 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
ACSM3-209ENST00000564701 THOC2Q8NI27 1593 aaKnown RBP14.83□□□□□ -0.04
ACSM3-209ENST00000564701 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
ACSM3-209ENST00000564701 KIF21AQ7Z4S6 1674 aa14.79□□□□□ -0.04
ACSM3-209ENST00000564701 ABCC8Q09428 1581 aa14.78□□□□□ -0.04
ACSM3-209ENST00000564701 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.04
ACSM3-209ENST00000564701 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
ACSM3-209ENST00000564701 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
ACSM3-209ENST00000564701 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
ACSM3-209ENST00000564701 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
ACSM3-209ENST00000564701 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
ACSM3-209ENST00000564701 WDR62O43379 1518 aa14.66□□□□□ -0.06
ACSM3-209ENST00000564701 CUX1P39880 1505 aa14.65□□□□□ -0.06
ACSM3-209ENST00000564701 FOXD1Q16676 465 aa14.64□□□□□ -0.07
ACSM3-209ENST00000564701 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
ACSM3-209ENST00000564701 EEA1Q15075 1411 aa14.59□□□□□ -0.07
ACSM3-209ENST00000564701 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
ACSM3-209ENST00000564701 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
ACSM3-209ENST00000564701 FGD5Q6ZNL6 1462 aa14.54□□□□□ -0.08
ACSM3-209ENST00000564701 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
ACSM3-209ENST00000564701 SOGA1O94964 1423 aa14.49□□□□□ -0.09
ACSM3-209ENST00000564701 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
ACSM3-209ENST00000564701 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
ACSM3-209ENST00000564701 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
ACSM3-209ENST00000564701 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
ACSM3-209ENST00000564701 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
ACSM3-209ENST00000564701 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
ACSM3-209ENST00000564701 RUSC2Q8N2Y8 1516 aa14.4□□□□□ -0.1
ACSM3-209ENST00000564701 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
ACSM3-209ENST00000564701 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
ACSM3-209ENST00000564701 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
ACSM3-209ENST00000564701 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
ACSM3-209ENST00000564701 POTEDQ86YR6 584 aa14.36□□□□□ -0.11
ACSM3-209ENST00000564701 KIF21BO75037 1637 aa14.34□□□□□ -0.11
ACSM3-209ENST00000564701 ABCA5Q8WWZ7 1642 aa14.32□□□□□ -0.12
ACSM3-209ENST00000564701 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
ACSM3-209ENST00000564701 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
ACSM3-209ENST00000564701 IGF1RP08069 1367 aa14.31□□□□□ -0.12
ACSM3-209ENST00000564701 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
ACSM3-209ENST00000564701 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
ACSM3-209ENST00000564701 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
ACSM3-209ENST00000564701 TDRD9Q8NDG6 1382 aaKnown RBP14.29□□□□□ -0.12
ACSM3-209ENST00000564701 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
ACSM3-209ENST00000564701 CUL7Q14999 1698 aa14.27□□□□□ -0.12
ACSM3-209ENST00000564701 CARMIL1Q5VZK9 1371 aa14.26□□□□□ -0.13
ACSM3-209ENST00000564701 EIF4G3O43432 1585 aaKnown RBP14.25□□□□□ -0.13
ACSM3-209ENST00000564701 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
ACSM3-209ENST00000564701 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
ACSM3-209ENST00000564701 RAPGEF2Q9Y4G8 1499 aa14.24□□□□□ -0.13
ACSM3-209ENST00000564701 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
ACSM3-209ENST00000564701 FBLN2P98095 1184 aa14.23□□□□□ -0.13
ACSM3-209ENST00000564701 PBRM1Q86U86 1689 aa14.22□□□□□ -0.13
ACSM3-209ENST00000564701 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
ACSM3-209ENST00000564701 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
ACSM3-209ENST00000564701 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms