RNA–Protein interactions for RNA: ENST00000564675.5

SNUPN-206, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNUPN, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-206ENST00000564675 NISCHQ9Y2I1 1504 aa35.97■■■■□ 3.35
SNUPN-206ENST00000564675 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
SNUPN-206ENST00000564675 ABCC9O60706 1549 aa30.64■■■□□ 2.49
SNUPN-206ENST00000564675 DCAF8L2P0C7V8 631 aa30.14■■■□□ 2.41
SNUPN-206ENST00000564675 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
SNUPN-206ENST00000564675 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
SNUPN-206ENST00000564675 NACADO15069 1562 aa29.71■■■□□ 2.35
SNUPN-206ENST00000564675 MYO15BQ96JP2 1530 aa29.69■■■□□ 2.34
SNUPN-206ENST00000564675 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
SNUPN-206ENST00000564675 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
SNUPN-206ENST00000564675 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
SNUPN-206ENST00000564675 SHROOM4Q9ULL8 1493 aa28.84■■■□□ 2.21
SNUPN-206ENST00000564675 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
SNUPN-206ENST00000564675 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
SNUPN-206ENST00000564675 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
SNUPN-206ENST00000564675 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
SNUPN-206ENST00000564675 BAZ1AQ9NRL2 1556 aaPredicted RBP27.83■■■□□ 2.05
SNUPN-206ENST00000564675 DNAJC5BQ9UF47 199 aa27.78■■■□□ 2.04
SNUPN-206ENST00000564675 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
SNUPN-206ENST00000564675 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
SNUPN-206ENST00000564675 CC2D2AQ9P2K1 1620 aa27.65■■■□□ 2.02
SNUPN-206ENST00000564675 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
SNUPN-206ENST00000564675 ATAD2BQ9ULI0 1458 aa27.55■■■□□ 2
SNUPN-206ENST00000564675 SMARCA2P51531 1590 aa27.51■■□□□ 1.99
SNUPN-206ENST00000564675 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
SNUPN-206ENST00000564675 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
SNUPN-206ENST00000564675 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
SNUPN-206ENST00000564675 WIZO95785 1651 aa27.39■■□□□ 1.98
SNUPN-206ENST00000564675 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
SNUPN-206ENST00000564675 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
SNUPN-206ENST00000564675 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
SNUPN-206ENST00000564675 CCDC88BA6NC98 1476 aa26.92■■□□□ 1.9
SNUPN-206ENST00000564675 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
SNUPN-206ENST00000564675 CFTRP13569 1480 aa26.64■■□□□ 1.86
SNUPN-206ENST00000564675 NESP48681 1621 aa26.63■■□□□ 1.85
SNUPN-206ENST00000564675 LAMC3Q9Y6N6 1575 aa26.59■■□□□ 1.85
SNUPN-206ENST00000564675 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
SNUPN-206ENST00000564675 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
SNUPN-206ENST00000564675 FANCD2Q9BXW9 1451 aa26.39■■□□□ 1.82
SNUPN-206ENST00000564675 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
SNUPN-206ENST00000564675 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
SNUPN-206ENST00000564675 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
SNUPN-206ENST00000564675 MRC2Q9UBG0 1479 aa26.14■■□□□ 1.78
SNUPN-206ENST00000564675 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
SNUPN-206ENST00000564675 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
SNUPN-206ENST00000564675 URB2Q14146 1524 aaKnown RBP26.05■■□□□ 1.76
SNUPN-206ENST00000564675 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
SNUPN-206ENST00000564675 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
SNUPN-206ENST00000564675 WDR62O43379 1518 aa25.98■■□□□ 1.75
SNUPN-206ENST00000564675 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
SNUPN-206ENST00000564675 CUX1P39880 1505 aa25.96■■□□□ 1.75
SNUPN-206ENST00000564675 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
SNUPN-206ENST00000564675 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
SNUPN-206ENST00000564675 CUX2O14529 1486 aa25.88■■□□□ 1.73
SNUPN-206ENST00000564675 SYNJ1O43426 1573 aa25.85■■□□□ 1.73
SNUPN-206ENST00000564675 TOP2BQ02880 1626 aa25.84■■□□□ 1.73
SNUPN-206ENST00000564675 FGD5Q6ZNL6 1462 aa25.82■■□□□ 1.72
SNUPN-206ENST00000564675 POLA1P09884 1462 aaPredicted RBP25.81■■□□□ 1.72
SNUPN-206ENST00000564675 SOGA1O94964 1423 aa25.81■■□□□ 1.72
SNUPN-206ENST00000564675 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
SNUPN-206ENST00000564675 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
SNUPN-206ENST00000564675 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
SNUPN-206ENST00000564675 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
SNUPN-206ENST00000564675 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
SNUPN-206ENST00000564675 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
SNUPN-206ENST00000564675 ZNF608Q9ULD9 1512 aaPredicted RBP25.56■■□□□ 1.68
SNUPN-206ENST00000564675 AQRO60306 1485 aaKnown RBP eCLIP25.55■■□□□ 1.68
SNUPN-206ENST00000564675 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
SNUPN-206ENST00000564675 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
SNUPN-206ENST00000564675 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
SNUPN-206ENST00000564675 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
SNUPN-206ENST00000564675 GRIN2BQ13224 1484 aa25.39■■□□□ 1.66
SNUPN-206ENST00000564675 IGF1RP08069 1367 aa25.38■■□□□ 1.65
SNUPN-206ENST00000564675 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
SNUPN-206ENST00000564675 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
SNUPN-206ENST00000564675 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
SNUPN-206ENST00000564675 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
SNUPN-206ENST00000564675 EEA1Q15075 1411 aa25.33■■□□□ 1.65
SNUPN-206ENST00000564675 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
SNUPN-206ENST00000564675 FBLN2P98095 1184 aa25.28■■□□□ 1.64
SNUPN-206ENST00000564675 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
SNUPN-206ENST00000564675 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
SNUPN-206ENST00000564675 MAGI1Q96QZ7 1491 aaPredicted RBP25.24■■□□□ 1.63
SNUPN-206ENST00000564675 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
SNUPN-206ENST00000564675 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
SNUPN-206ENST00000564675 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
SNUPN-206ENST00000564675 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
SNUPN-206ENST00000564675 OSCARQ8IYS5 282 aa25.1■■□□□ 1.61
SNUPN-206ENST00000564675 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
SNUPN-206ENST00000564675 RAPGEF2Q9Y4G8 1499 aa25.08■■□□□ 1.61
SNUPN-206ENST00000564675 CUL7Q14999 1698 aa25.08■■□□□ 1.6
SNUPN-206ENST00000564675 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
SNUPN-206ENST00000564675 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
SNUPN-206ENST00000564675 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
SNUPN-206ENST00000564675 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
SNUPN-206ENST00000564675 CHD1O14646 1710 aa24.91■■□□□ 1.58
SNUPN-206ENST00000564675 LOC105371045A0A1W2PR82 267 aa24.91■■□□□ 1.58
SNUPN-206ENST00000564675 NUP160Q12769 1436 aa24.9■■□□□ 1.58
SNUPN-206ENST00000564675 KIF21BO75037 1637 aa24.9■■□□□ 1.58
SNUPN-206ENST00000564675 GOLGA3Q08378 1498 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms