RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 NISCHQ9Y2I1 1504 aa41.34■■■■■ 4.21
CPNE7-207ENST00000564421 CCDC180Q9P1Z9 1646 aa36.79■■■■□ 3.48
CPNE7-207ENST00000564421 ABCC9O60706 1549 aa35.68■■■■□ 3.3
CPNE7-207ENST00000564421 NACADO15069 1562 aa34.5■■■■□ 3.11
CPNE7-207ENST00000564421 RB1CC1Q8TDY2 1594 aa34.49■■■■□ 3.11
CPNE7-207ENST00000564421 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
CPNE7-207ENST00000564421 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
CPNE7-207ENST00000564421 DCAF8L2P0C7V8 631 aa34.33■■■■□ 3.09
CPNE7-207ENST00000564421 DCAF1Q9Y4B6 1507 aa34.27■■■■□ 3.08
CPNE7-207ENST00000564421 UNC13AQ9UPW8 1703 aa33.82■■■■□ 3
CPNE7-207ENST00000564421 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
CPNE7-207ENST00000564421 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
CPNE7-207ENST00000564421 PABPN1Q86U42 306 aaKnown RBP eCLIP33.31■■■□□ 2.92
CPNE7-207ENST00000564421 SHROOM4Q9ULL8 1493 aa33.13■■■□□ 2.89
CPNE7-207ENST00000564421 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
CPNE7-207ENST00000564421 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
CPNE7-207ENST00000564421 CC2D2AQ9P2K1 1620 aa32.37■■■□□ 2.77
CPNE7-207ENST00000564421 CECR2Q9BXF3 1484 aa32.13■■■□□ 2.73
CPNE7-207ENST00000564421 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
CPNE7-207ENST00000564421 BAZ1AQ9NRL2 1556 aaPredicted RBP32.06■■■□□ 2.72
CPNE7-207ENST00000564421 SMARCA2P51531 1590 aa31.83■■■□□ 2.69
CPNE7-207ENST00000564421 MROH2BQ7Z745 1585 aa31.83■■■□□ 2.69
CPNE7-207ENST00000564421 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
CPNE7-207ENST00000564421 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
CPNE7-207ENST00000564421 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
CPNE7-207ENST00000564421 HMGXB3Q12766 1538 aa31.69■■■□□ 2.66
CPNE7-207ENST00000564421 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
CPNE7-207ENST00000564421 WIZO95785 1651 aa31.54■■■□□ 2.64
CPNE7-207ENST00000564421 RSF1Q96T23 1441 aaPredicted RBP31.51■■■□□ 2.64
CPNE7-207ENST00000564421 TOP2AP11388 1531 aaKnown RBP31.21■■■□□ 2.59
CPNE7-207ENST00000564421 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
CPNE7-207ENST00000564421 NESP48681 1621 aa30.93■■■□□ 2.54
CPNE7-207ENST00000564421 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
CPNE7-207ENST00000564421 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
CPNE7-207ENST00000564421 ERCC6Q03468 1493 aa30.76■■■□□ 2.51
CPNE7-207ENST00000564421 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
CPNE7-207ENST00000564421 CFTRP13569 1480 aa30.71■■■□□ 2.51
CPNE7-207ENST00000564421 PDS5BQ9NTI5 1447 aa30.7■■■□□ 2.5
CPNE7-207ENST00000564421 KIF21AQ7Z4S6 1674 aa30.68■■■□□ 2.5
CPNE7-207ENST00000564421 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
CPNE7-207ENST00000564421 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
CPNE7-207ENST00000564421 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
CPNE7-207ENST00000564421 CEP164Q9UPV0 1460 aa30.45■■■□□ 2.47
CPNE7-207ENST00000564421 CUX2O14529 1486 aa30.44■■■□□ 2.46
CPNE7-207ENST00000564421 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
CPNE7-207ENST00000564421 WDR62O43379 1518 aa30.31■■■□□ 2.44
CPNE7-207ENST00000564421 URB2Q14146 1524 aaKnown RBP30.18■■■□□ 2.42
CPNE7-207ENST00000564421 ABCC8Q09428 1581 aa30.09■■■□□ 2.41
CPNE7-207ENST00000564421 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
CPNE7-207ENST00000564421 TOPBP1Q92547 1522 aa30.04■■■□□ 2.4
CPNE7-207ENST00000564421 CUX1P39880 1505 aa29.86■■■□□ 2.37
CPNE7-207ENST00000564421 IFT140Q96RY7 1462 aa29.81■■■□□ 2.36
CPNE7-207ENST00000564421 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
CPNE7-207ENST00000564421 TARBP1Q13395 1621 aaKnown RBP29.74■■■□□ 2.35
CPNE7-207ENST00000564421 FGD5Q6ZNL6 1462 aa29.74■■■□□ 2.35
CPNE7-207ENST00000564421 BIVM-ERCC5R4GMW8 1640 aa29.73■■■□□ 2.35
CPNE7-207ENST00000564421 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
CPNE7-207ENST00000564421 DNAJC5Q9H3Z4 198 aa29.7■■■□□ 2.35
CPNE7-207ENST00000564421 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
CPNE7-207ENST00000564421 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
CPNE7-207ENST00000564421 SOGA1O94964 1423 aa29.64■■■□□ 2.34
CPNE7-207ENST00000564421 ZNF608Q9ULD9 1512 aaPredicted RBP29.63■■■□□ 2.33
CPNE7-207ENST00000564421 RAD54L2Q9Y4B4 1467 aa29.62■■■□□ 2.33
CPNE7-207ENST00000564421 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
CPNE7-207ENST00000564421 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
CPNE7-207ENST00000564421 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
CPNE7-207ENST00000564421 AQRO60306 1485 aaKnown RBP eCLIP29.47■■■□□ 2.313e-8■■□□□ 14.5
CPNE7-207ENST00000564421 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
CPNE7-207ENST00000564421 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
CPNE7-207ENST00000564421 PBRM1Q86U86 1689 aa29.36■■■□□ 2.29
CPNE7-207ENST00000564421 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
CPNE7-207ENST00000564421 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
CPNE7-207ENST00000564421 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
CPNE7-207ENST00000564421 CHD1O14646 1710 aa29.23■■■□□ 2.27
CPNE7-207ENST00000564421 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
CPNE7-207ENST00000564421 ERICH3Q5RHP9 1530 aa29.15■■■□□ 2.26
CPNE7-207ENST00000564421 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
CPNE7-207ENST00000564421 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
CPNE7-207ENST00000564421 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
CPNE7-207ENST00000564421 ADAMTS12P58397 1594 aa29.08■■■□□ 2.25
CPNE7-207ENST00000564421 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
CPNE7-207ENST00000564421 FBLN2P98095 1184 aa29.03■■■□□ 2.24
CPNE7-207ENST00000564421 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
CPNE7-207ENST00000564421 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
CPNE7-207ENST00000564421 CUL7Q14999 1698 aa28.96■■■□□ 2.23
CPNE7-207ENST00000564421 GRIN2AQ12879 1464 aa28.93■■■□□ 2.22
CPNE7-207ENST00000564421 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
CPNE7-207ENST00000564421 IGF1RP08069 1367 aa28.92■■■□□ 2.22
CPNE7-207ENST00000564421 CLASP1Q7Z460 1538 aa28.87■■■□□ 2.21
CPNE7-207ENST00000564421 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
CPNE7-207ENST00000564421 NUP160Q12769 1436 aa28.8■■■□□ 2.2
CPNE7-207ENST00000564421 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
CPNE7-207ENST00000564421 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.2
CPNE7-207ENST00000564421 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
CPNE7-207ENST00000564421 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
CPNE7-207ENST00000564421 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
CPNE7-207ENST00000564421 ARHGEF11O15085 1522 aa28.7■■■□□ 2.19
CPNE7-207ENST00000564421 EEA1Q15075 1411 aa28.67■■■□□ 2.18
CPNE7-207ENST00000564421 RAPGEF2Q9Y4G8 1499 aa28.64■■■□□ 2.17
CPNE7-207ENST00000564421 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms