RNA–Protein interactions for RNA: ENST00000564398.5

RHD-208, Transcript of Rh blood group D antigen, humanhuman

TSL 1 (best)

Gene RHD, Length 1,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHD-208ENST00000564398 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
RHD-208ENST00000564398 CCDC180Q9P1Z9 1646 aa31.73■■■□□ 2.67
RHD-208ENST00000564398 ABCC9O60706 1549 aa31.67■■■□□ 2.66
RHD-208ENST00000564398 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
RHD-208ENST00000564398 NACADO15069 1562 aa29.92■■■□□ 2.38
RHD-208ENST00000564398 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
RHD-208ENST00000564398 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
RHD-208ENST00000564398 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
RHD-208ENST00000564398 MYO15BQ96JP2 1530 aa29.44■■■□□ 2.3
RHD-208ENST00000564398 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
RHD-208ENST00000564398 BICRAQ9NZM4 1560 aa29.28■■■□□ 2.28
RHD-208ENST00000564398 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
RHD-208ENST00000564398 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
RHD-208ENST00000564398 SCRIBQ14160 1630 aa28.95■■■□□ 2.23
RHD-208ENST00000564398 SHROOM4Q9ULL8 1493 aa28.82■■■□□ 2.2
RHD-208ENST00000564398 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
RHD-208ENST00000564398 EIF4G1Q04637 1599 aaKnown RBP28.55■■■□□ 2.16
RHD-208ENST00000564398 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
RHD-208ENST00000564398 SMARCA4P51532 1647 aa27.58■■■□□ 2
RHD-208ENST00000564398 NCAPD3P42695 1498 aa27.56■■■□□ 2
RHD-208ENST00000564398 ATAD2BQ9ULI0 1458 aa27.52■■■□□ 2
RHD-208ENST00000564398 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
RHD-208ENST00000564398 HMGXB3Q12766 1538 aa27.43■■□□□ 1.98
RHD-208ENST00000564398 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.98
RHD-208ENST00000564398 ERCC6Q03468 1493 aa27.36■■□□□ 1.97
RHD-208ENST00000564398 BAZ1BQ9UIG0 1483 aaKnown RBP27.3■■□□□ 1.96
RHD-208ENST00000564398 PEG3Q9GZU2 1588 aa27.25■■□□□ 1.95
RHD-208ENST00000564398 CUX2O14529 1486 aa27.25■■□□□ 1.95
RHD-208ENST00000564398 NESP48681 1621 aa27.21■■□□□ 1.95
RHD-208ENST00000564398 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
RHD-208ENST00000564398 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
RHD-208ENST00000564398 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
RHD-208ENST00000564398 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
RHD-208ENST00000564398 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
RHD-208ENST00000564398 WIZO95785 1651 aa26.94■■□□□ 1.9
RHD-208ENST00000564398 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
RHD-208ENST00000564398 CADPSQ9ULU8 1353 aa26.72■■□□□ 1.87
RHD-208ENST00000564398 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
RHD-208ENST00000564398 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
RHD-208ENST00000564398 WDR62O43379 1518 aa26.57■■□□□ 1.84
RHD-208ENST00000564398 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
RHD-208ENST00000564398 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
RHD-208ENST00000564398 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
RHD-208ENST00000564398 CFTRP13569 1480 aa26.45■■□□□ 1.82
RHD-208ENST00000564398 PRDM2Q13029 1718 aa26.39■■□□□ 1.81
RHD-208ENST00000564398 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
RHD-208ENST00000564398 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
RHD-208ENST00000564398 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
RHD-208ENST00000564398 TOPBP1Q92547 1522 aa26■■□□□ 1.75
RHD-208ENST00000564398 IFT140Q96RY7 1462 aa25.96■■□□□ 1.75
RHD-208ENST00000564398 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
RHD-208ENST00000564398 OSCARQ8IYS5 282 aa25.94■■□□□ 1.74
RHD-208ENST00000564398 DNMBPQ6XZF7 1577 aa25.93■■□□□ 1.74
RHD-208ENST00000564398 EIF4G3O43432 1585 aaKnown RBP25.89■■□□□ 1.73
RHD-208ENST00000564398 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
RHD-208ENST00000564398 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
RHD-208ENST00000564398 RIMBP3CA6NJZ7 1639 aa25.75■■□□□ 1.71
RHD-208ENST00000564398 RIMBP3BA6NNM3 1639 aa25.75■■□□□ 1.71
RHD-208ENST00000564398 RIMBP3Q9UFD9 1639 aa25.75■■□□□ 1.71
RHD-208ENST00000564398 CHD1O14646 1710 aa25.74■■□□□ 1.71
RHD-208ENST00000564398 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
RHD-208ENST00000564398 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.7
RHD-208ENST00000564398 RAD54L2Q9Y4B4 1467 aa25.64■■□□□ 1.69
RHD-208ENST00000564398 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
RHD-208ENST00000564398 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
RHD-208ENST00000564398 CUX1P39880 1505 aa25.58■■□□□ 1.68
RHD-208ENST00000564398 SOGA1O94964 1423 aa25.57■■□□□ 1.68
RHD-208ENST00000564398 TDRD9Q8NDG6 1382 aaKnown RBP25.53■■□□□ 1.68
RHD-208ENST00000564398 FBLN2P98095 1184 aa25.52■■□□□ 1.68
RHD-208ENST00000564398 WDR97A6NE52 1622 aa25.5■■□□□ 1.67
RHD-208ENST00000564398 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
RHD-208ENST00000564398 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
RHD-208ENST00000564398 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
RHD-208ENST00000564398 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
RHD-208ENST00000564398 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
RHD-208ENST00000564398 ARAP1Q96P48 1450 aa25.37■■□□□ 1.65
RHD-208ENST00000564398 CYB5RLQ6IPT4 315 aa25.37■■□□□ 1.65
RHD-208ENST00000564398 CLASP1Q7Z460 1538 aa25.34■■□□□ 1.65
RHD-208ENST00000564398 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
RHD-208ENST00000564398 CHMP7Q8WUX9 453 aaPredicted RBP25.3■■□□□ 1.64
RHD-208ENST00000564398 ABCA5Q8WWZ7 1642 aa25.29■■□□□ 1.64
RHD-208ENST00000564398 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
RHD-208ENST00000564398 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
RHD-208ENST00000564398 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
RHD-208ENST00000564398 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
RHD-208ENST00000564398 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
RHD-208ENST00000564398 WRNQ14191 1432 aaPredicted RBP eCLIP25.15■■□□□ 1.62
RHD-208ENST00000564398 TRHP20396 242 aaPredicted RBP25.12■■□□□ 1.61
RHD-208ENST00000564398 ADAMTS12P58397 1594 aa25.11■■□□□ 1.61
RHD-208ENST00000564398 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
RHD-208ENST00000564398 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
RHD-208ENST00000564398 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
RHD-208ENST00000564398 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
RHD-208ENST00000564398 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
RHD-208ENST00000564398 NUP160Q12769 1436 aa24.94■■□□□ 1.58
RHD-208ENST00000564398 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
RHD-208ENST00000564398 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
RHD-208ENST00000564398 PRG4Q92954 1404 aaPredicted RBP24.71■■□□□ 1.55
RHD-208ENST00000564398 CUL7Q14999 1698 aa24.67■■□□□ 1.54
RHD-208ENST00000564398 KIF27Q86VH2 1401 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms