RNA–Protein interactions for RNA: ENST00000564397.5

NAGPA-208, Transcript of N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, humanhuman

TSL 2

Gene NAGPA, Length 3,286 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAGPA-208ENST00000564397 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
NAGPA-208ENST00000564397 ABCC9O60706 1549 aa22.36■■□□□ 1.17
NAGPA-208ENST00000564397 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
NAGPA-208ENST00000564397 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
NAGPA-208ENST00000564397 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
NAGPA-208ENST00000564397 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.981e-6■■■■□ 24.5
NAGPA-208ENST00000564397 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
NAGPA-208ENST00000564397 NACADO15069 1562 aa21.05■□□□□ 0.96
NAGPA-208ENST00000564397 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
NAGPA-208ENST00000564397 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
NAGPA-208ENST00000564397 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
NAGPA-208ENST00000564397 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
NAGPA-208ENST00000564397 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
NAGPA-208ENST00000564397 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
NAGPA-208ENST00000564397 BICRAQ9NZM4 1560 aa20.48■□□□□ 0.87
NAGPA-208ENST00000564397 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
NAGPA-208ENST00000564397 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.81
NAGPA-208ENST00000564397 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
NAGPA-208ENST00000564397 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
NAGPA-208ENST00000564397 HRCP23327 699 aa19.92■□□□□ 0.78
NAGPA-208ENST00000564397 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
NAGPA-208ENST00000564397 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
NAGPA-208ENST00000564397 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
NAGPA-208ENST00000564397 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
NAGPA-208ENST00000564397 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
NAGPA-208ENST00000564397 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
NAGPA-208ENST00000564397 WIZO95785 1651 aa19.6■□□□□ 0.73
NAGPA-208ENST00000564397 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
NAGPA-208ENST00000564397 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
NAGPA-208ENST00000564397 SMARCA2P51531 1590 aa19.52■□□□□ 0.72
NAGPA-208ENST00000564397 PCGF6Q9BYE7 350 aa19.46■□□□□ 0.71
NAGPA-208ENST00000564397 NESP48681 1621 aa19.36■□□□□ 0.69
NAGPA-208ENST00000564397 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
NAGPA-208ENST00000564397 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
NAGPA-208ENST00000564397 TRIM26Q12899 539 aaPredicted RBP19.24■□□□□ 0.67
NAGPA-208ENST00000564397 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
NAGPA-208ENST00000564397 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
NAGPA-208ENST00000564397 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
NAGPA-208ENST00000564397 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
NAGPA-208ENST00000564397 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
NAGPA-208ENST00000564397 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
NAGPA-208ENST00000564397 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
NAGPA-208ENST00000564397 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
NAGPA-208ENST00000564397 CFTRP13569 1480 aa18.95■□□□□ 0.62
NAGPA-208ENST00000564397 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
NAGPA-208ENST00000564397 LAMC3Q9Y6N6 1575 aa18.91■□□□□ 0.62
NAGPA-208ENST00000564397 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
NAGPA-208ENST00000564397 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
NAGPA-208ENST00000564397 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.6
NAGPA-208ENST00000564397 PELP1Q8IZL8 1130 aaKnown RBP18.8■□□□□ 0.6
NAGPA-208ENST00000564397 MRC2Q9UBG0 1479 aa18.73■□□□□ 0.59
NAGPA-208ENST00000564397 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
NAGPA-208ENST00000564397 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
NAGPA-208ENST00000564397 FBLN2P98095 1184 aa18.64■□□□□ 0.57
NAGPA-208ENST00000564397 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
NAGPA-208ENST00000564397 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
NAGPA-208ENST00000564397 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
NAGPA-208ENST00000564397 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
NAGPA-208ENST00000564397 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
NAGPA-208ENST00000564397 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.57
NAGPA-208ENST00000564397 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
NAGPA-208ENST00000564397 CUX2O14529 1486 aa18.55■□□□□ 0.56
NAGPA-208ENST00000564397 SOGA1O94964 1423 aa18.55■□□□□ 0.56
NAGPA-208ENST00000564397 CUX1P39880 1505 aa18.53■□□□□ 0.56
NAGPA-208ENST00000564397 WDR62O43379 1518 aa18.52■□□□□ 0.55
NAGPA-208ENST00000564397 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.553e-6■■■■□ 20.5
NAGPA-208ENST00000564397 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
NAGPA-208ENST00000564397 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
NAGPA-208ENST00000564397 POLA1P09884 1462 aaPredicted RBP18.49■□□□□ 0.55
NAGPA-208ENST00000564397 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
NAGPA-208ENST00000564397 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
NAGPA-208ENST00000564397 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
NAGPA-208ENST00000564397 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
NAGPA-208ENST00000564397 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
NAGPA-208ENST00000564397 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
NAGPA-208ENST00000564397 EEA1Q15075 1411 aa18.32■□□□□ 0.52
NAGPA-208ENST00000564397 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
NAGPA-208ENST00000564397 TOP2BQ02880 1626 aa18.27■□□□□ 0.52
NAGPA-208ENST00000564397 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.51
NAGPA-208ENST00000564397 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
NAGPA-208ENST00000564397 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
NAGPA-208ENST00000564397 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
NAGPA-208ENST00000564397 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
NAGPA-208ENST00000564397 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
NAGPA-208ENST00000564397 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
NAGPA-208ENST00000564397 TARBP1Q13395 1621 aaKnown RBP18.22■□□□□ 0.51
NAGPA-208ENST00000564397 CEP162Q5TB80 1403 aa18.21■□□□□ 0.51
NAGPA-208ENST00000564397 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
NAGPA-208ENST00000564397 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
NAGPA-208ENST00000564397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
NAGPA-208ENST00000564397 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
NAGPA-208ENST00000564397 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
NAGPA-208ENST00000564397 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
NAGPA-208ENST00000564397 BIVM-ERCC5R4GMW8 1640 aa18.15■□□□□ 0.5
NAGPA-208ENST00000564397 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
NAGPA-208ENST00000564397 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
NAGPA-208ENST00000564397 IGF1RP08069 1367 aa18.11■□□□□ 0.49
NAGPA-208ENST00000564397 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
NAGPA-208ENST00000564397 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
NAGPA-208ENST00000564397 NEUROD1Q13562 356 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms